Prupe.1G428800_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
36815180 .. 36815827
648 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G428800.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 648 bp
ATGGGAGAACCTTTCTGGAACAGTTTAGCTATGGTCATCATCTTCACCTTCCTTGTCAAGCTCTCCATATCCAAGATTACACAAAAACACAAGAAGAACCTACCCCCAAGCCCACCATCTCTTCCCATTATTGGCCATATCCATCTTCTAAAACAACCAATGCACCGAACCCTCCAAGATCTTTCTCAAAACTTGGGCAAAATTCTCCGTTGTGGTTCACGCAAAGTCCTGTTGGTCTCTTCGGTTTTGGCGGCAGAAGAGTGTTTGACGAAGCATGACATCATCATCTTCGCCAATCTCCGCCGTATTATGACTCTTGAGATCTTCTCCTCCTCTCGCCTTGCCTTGTTCTCAATTGTCAGACAAGGAGAAGTTGGTTTATTACTGGATGAGATAATGAAGAGTTGTACTTCAAGGGTTGAGCTCAAGTCCAAGTTTCCCGATCTTTCCTTTAATGTGATGACGATGATGGTTGTGGGAAAGCGGTACCATGGTGAAAATGTTGCAGATGTTGAAGAGGCAAAGAATTTTCATGACGTTTTTAAGGCCTCCGTGGACTTGTCCGGGGCAGGAACTGCGGCAGACTTTTTGCCAATTTTACGGTGGGTGGATATATCAGGCTTGGAAAAGAACTACTACAAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00905 ko00943 ko01100 ko01110 ko04913 ko04917 ko04927 ko04934 map00140 map00905 map00943 map01100 map01110 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

216

Amino Acids

24.21

Weight (kDa)

9.46

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 486
AccB1I GGYRCC 1 cut(s) 486
AciI CCGC 4 cut(s) 251, 301, 484, 578
AcoI YGGCCR 1 cut(s) 133
AcsI RAATTY 2 cut(s) 201, 526
AfaI GTAC 2 cut(s) 409, 488
AfiI CCNNNNNNNGG 1 cut(s) 131
AgsI TTSAA 2 cut(s) 414, 515
AluBI AGCT 3 cut(s) 29, 61, 424
AluI AGCT 3 cut(s) 29, 61, 424
Alw21I GWGCWC 1 cut(s) 426
Alw26I GTCTC 1 cut(s) 241
AlwNI CAGNNNCTG 1 cut(s) 575
AoxI GGCC 2 cut(s) 133, 546
ApoI RAATTY 2 cut(s) 201, 526
Asp718I GGTACC 1 cut(s) 486
AsuC2I CCSGG 1 cut(s) 565
AsuHPI GGTGA 2 cut(s) 37, 506
BaeI ACNNNNGTAYC 2 cut(s) 478, 511
BalI TGGCCA 1 cut(s) 135
BanI GGYRCC 1 cut(s) 486
BanII GRGCYC 1 cut(s) 426
Bbv12I GWGCWC 1 cut(s) 426
BccI CCATC 3 cut(s) 124, 150, 463
BceAI ACGGC 1 cut(s) 288
BcnI CCSGG 1 cut(s) 565
BcoDI GTCTC 1 cut(s) 241
BglII AGATCT 2 cut(s) 178, 321
BisI GCNGC 2 cut(s) 252, 579
BlsI GCNGC 2 cut(s) 253, 580
Bme1390I CCNGG 1 cut(s) 565
BmiI GGNNCC 1 cut(s) 488
BmrFI CCNGG 1 cut(s) 565
BplI GAGNNNNNCTC 2 cut(s) 311, 343
BpuEI CTTGAG 2 cut(s) 338, 410
BpuMI CCSGG 1 cut(s) 565
BsaI GGTCTC 1 cut(s) 241
BsaJI CCNNGG 3 cut(s) 490, 552, 564
Bsc4I CCNNNNNNNGG 1 cut(s) 131
Bse1I ACTGG 1 cut(s) 390
BseDI CCNNGG 3 cut(s) 490, 552, 564
BseGI GGATG 1 cut(s) 394
BseLI CCNNNNNNNGG 1 cut(s) 131
BseNI ACTGG 1 cut(s) 390
BseRI GAGGAG 2 cut(s) 319, 322
BshFI GGCC 2 cut(s) 135, 548
BshNI GGYRCC 1 cut(s) 486
BsiHKAI GWGCWC 1 cut(s) 426
BsiSI CCGG 1 cut(s) 564
BslI CCNNNNNNNGG 1 cut(s) 131
BsmAI GTCTC 1 cut(s) 241
BsnI GGCC 2 cut(s) 135, 548
Bso31I GGTCTC 1 cut(s) 241
Bsp1286I GDGCHC 1 cut(s) 426
Bsp143I GATC 3 cut(s) 178, 321, 442
Bsp19I CCATGG 1 cut(s) 490
BspACI CCGC 4 cut(s) 251, 301, 484, 578
BspANI GGCC 2 cut(s) 135, 548
BspHI TCATGA 1 cut(s) 532
BspLI GGNNCC 1 cut(s) 488
BspT107I GGYRCC 1 cut(s) 486
BspTNI GGTCTC 1 cut(s) 241
BsrI ACTGG 1 cut(s) 390
BssECI CCNNGG 3 cut(s) 490, 552, 564
BssMI GATC 3 cut(s) 178, 321, 442
BssT1I CCWWGG 1 cut(s) 490
Bst4CI ACNGT 2 cut(s) 23, 603
Bst6I CTCTTC 5 cut(s) 126, 244, 252, 395, 510
BstAPI GCANNNNNTGC 1 cut(s) 575
BstDSI CCRYGG 2 cut(s) 490, 552
BstF5I GGATG 1 cut(s) 394
BstKTI GATC 3 cut(s) 181, 324, 445
BstMAI GTCTC 1 cut(s) 241
BstMBI GATC 3 cut(s) 178, 321, 442
BstMWI GCNNNNNNNGC 1 cut(s) 575
BstSCI CCNGG 1 cut(s) 563
BstX2I RGATCY 2 cut(s) 178, 321
BstYI RGATCY 2 cut(s) 178, 321
BsuRI GGCC 2 cut(s) 135, 548
BtgI CCRYGG 2 cut(s) 490, 552
BtsCI GGATG 1 cut(s) 394
CaiI CAGNNNCTG 1 cut(s) 575
CciI TCATGA 1 cut(s) 532
Csp6I GTAC 2 cut(s) 408, 487
CviAII CATG 3 cut(s) 275, 491, 533
CviJI RGCY 7 cut(s) 29, 61, 111, 135, 424, 548, 621
CviKI_1 RGCY 7 cut(s) 29, 61, 111, 135, 424, 548, 621
CviQI GTAC 2 cut(s) 408, 487
DpnI GATC 3 cut(s) 180, 323, 444
DpnII GATC 3 cut(s) 178, 321, 442
EaeI YGGCCR 1 cut(s) 133
Eam1104I CTCTTC 5 cut(s) 126, 244, 252, 395, 510
EarI CTCTTC 5 cut(s) 126, 244, 252, 395, 510
EciI GGCGGA 1 cut(s) 290
Ecl136II GAGCTC 1 cut(s) 424
Eco130I CCWWGG 1 cut(s) 490
Eco147I AGGCCT 1 cut(s) 548
Eco24I GRGCYC 1 cut(s) 426
Eco31I GGTCTC 1 cut(s) 241
Eco53kI GAGCTC 1 cut(s) 424
EcoICRI GAGCTC 1 cut(s) 424
EcoT14I CCWWGG 1 cut(s) 490
EcoT38I GRGCYC 1 cut(s) 426
ErhI CCWWGG 1 cut(s) 490
FaeI CATG 3 cut(s) 278, 494, 536
FaiI YATR 8 cut(s) 32, 68, 138, 276, 311, 492, 534, 614
FatI CATG 3 cut(s) 274, 490, 532
Fnu4HI GCNGC 2 cut(s) 252, 579
FokI GGATG 1 cut(s) 401
FriOI GRGCYC 1 cut(s) 426
Fsp4HI GCNGC 2 cut(s) 252, 579
GluI GCNGC 2 cut(s) 252, 579
HaeIII GGCC 2 cut(s) 135, 548
HapII CCGG 1 cut(s) 564
Hin1II CATG 3 cut(s) 278, 494, 536
HinfI GANTC 1 cut(s) 313
HpaII CCGG 1 cut(s) 564
HphI GGTGA 2 cut(s) 37, 506
Hpy166II GTNNAC 2 cut(s) 218, 556
Hpy188I TCNGA 1 cut(s) 362
Hpy188III TCNNGA 4 cut(s) 16, 317, 440, 533
Hpy8I GTNNAC 2 cut(s) 218, 556
HpyAV CCTTC 1 cut(s) 58
HpyCH4III ACNGT 2 cut(s) 23, 603
HpyCH4IV ACGT 1 cut(s) 537
HpyCH4V TGCA 2 cut(s) 163, 506
HpyF10VI GCNNNNNNNGC 1 cut(s) 575
HpySE526I ACGT 1 cut(s) 537
Hsp92II CATG 3 cut(s) 278, 494, 536
KpnI GGTACC 1 cut(s) 490
Kzo9I GATC 3 cut(s) 178, 321, 442
LpnPI CCDG 5 cut(s) 242, 371, 555, 577, 603
MaeII ACGT 1 cut(s) 537
MalI GATC 3 cut(s) 180, 323, 444
MboI GATC 3 cut(s) 178, 321, 442
MfeI CAATTG 1 cut(s) 354
MflI RGATCY 2 cut(s) 178, 321
MhlI GDGCHC 1 cut(s) 426
MlsI TGGCCA 1 cut(s) 135
MluCI AATT 4 cut(s) 201, 354, 526, 594
MluNI TGGCCA 1 cut(s) 135
MlyI GAGTC 1 cut(s) 307
MnlI CCTC 5 cut(s) 182, 340, 343, 511, 559
Mox20I TGGCCA 1 cut(s) 135
MscI TGGCCA 1 cut(s) 135
MseI TTAA 2 cut(s) 453, 543
Msp20I TGGCCA 1 cut(s) 135
MspI CCGG 1 cut(s) 564
MspR9I CCNGG 1 cut(s) 565
MunI CAATTG 1 cut(s) 354
MwoI GCNNNNNNNGC 1 cut(s) 575
NciI CCSGG 1 cut(s) 565
NcoI CCATGG 1 cut(s) 490
NdeII GATC 3 cut(s) 178, 321, 442
NlaIII CATG 3 cut(s) 278, 494, 536
NlaIV GGNNCC 1 cut(s) 488
PagI TCATGA 1 cut(s) 532
PceI AGGCCT 1 cut(s) 548
PkrI GCNGC 2 cut(s) 253, 580
PleI GAGTC 1 cut(s) 307
PpsI GAGTC 1 cut(s) 307
Psp124BI GAGCTC 1 cut(s) 426
PspN4I GGNNCC 1 cut(s) 488
PstNI CAGNNNCTG 1 cut(s) 575
PsuI RGATCY 2 cut(s) 178, 321
RsaI GTAC 2 cut(s) 409, 488
RsaNI GTAC 2 cut(s) 408, 487
SacI GAGCTC 1 cut(s) 426
SaqAI TTAA 2 cut(s) 453, 543
SatI GCNGC 2 cut(s) 252, 579
Sau3AI GATC 3 cut(s) 178, 321, 442
SchI GAGTC 1 cut(s) 307
ScrFI CCNGG 1 cut(s) 565
SduI GDGCHC 1 cut(s) 426
SetI ASST 7 cut(s) 13, 31, 50, 63, 102, 426, 540
SmlI CTYRAG 2 cut(s) 317, 425
SmoI CTYRAG 2 cut(s) 317, 425
Sse9I AATT 4 cut(s) 201, 354, 526, 594
SseBI AGGCCT 1 cut(s) 548
SsiI CCGC 4 cut(s) 251, 301, 484, 578
SstI GAGCTC 1 cut(s) 426
StuI AGGCCT 1 cut(s) 548
StyD4I CCNGG 1 cut(s) 563
StyI CCWWGG 1 cut(s) 490
TaaI ACNGT 2 cut(s) 23, 603
TaiI ACGT 1 cut(s) 540
TasI AATT 4 cut(s) 201, 354, 526, 594
TatI WGTACW 1 cut(s) 407
TauI GCSGC 2 cut(s) 254, 581
Tru1I TTAA 2 cut(s) 453, 543
Tru9I TTAA 2 cut(s) 453, 543
TspDTI ATGAA 2 cut(s) 413, 521
TspGWI ACGGA 2 cut(s) 197, 541
XapI RAATTY 2 cut(s) 201, 526
XcmI CCANNNNNNNNNTGG 1 cut(s) 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.