Prupe.1G428900_v2.0.a1

iron ion binding

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
36829313 .. 36830033
721 bp
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UTR
Exon/CDS
Intron
Prupe.1G428900.1_v2.0.a1.CDS.4

Sequence Viewer

Length: 522 bp
ATGATTGACAACTTATTGTCGATGCAAGCAAAAGTGCCTGAGTTGTACACAGATATTATAATCAAAGGAATCATTTTGGTAATTGCACAAATCTTTTACATGTGTTTGATTAGGTTTTTGTTTTGTTGCTGGGACTGCACAACATCAACAAATCTAGAAGGGGCAATGGCTCTGTTCCTAAACCATCCAGAGGCAATGGAGAAAGCGTGCGTTTTAAGAGCAAGACTTGCCAAAGCTGAGTTACTTACAAAATGGGGATTTGATGTGCCACGTCATGCAATGTTAGTGGTCAATGCGTGGGCCATCCAGAGGGACCCAGAGGTGTGGAAGGACCCTACGGAGTTTAAGCCAGAGAGGTATGAGAGATGGGTTGAACTTGATGAGGGCTCGGATGGATATAAGCTAATTGCATTTGGGGCTGGAAGGTTAATTCAGTCATTTGAGTGGGAGAGGATTGGTGAAGAGAATTTGGACATGGATGAAGGCTTGGGCTTGACCATGCGAAGGGTCAAGCCCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

174

Amino Acids

20.05

Weight (kDa)

5.04

Isoelectric Point (pI)

32.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 59
AcsI RAATTY 1 cut(s) 466
AfaI GTAC 1 cut(s) 47
AfiI CCNNNNNNNGG 3 cut(s) 190, 309, 504
AflIII ACRYGT 1 cut(s) 99
AgsI TTSAA 1 cut(s) 374
AjiI CACGTC 1 cut(s) 272
AluBI AGCT 2 cut(s) 236, 403
AluI AGCT 2 cut(s) 236, 403
AoxI GGCC 1 cut(s) 300
ApoI RAATTY 1 cut(s) 466
AspS9I GGNCC 3 cut(s) 300, 313, 331
AsuHPI GGTGA 1 cut(s) 470
AvaII GGWCC 2 cut(s) 313, 331
BanII GRGCYC 1 cut(s) 389
BccI CCATC 4 cut(s) 192, 311, 360, 386
BfaI CTAG 1 cut(s) 155
Bme18I GGWCC 2 cut(s) 313, 331
BmgBI CACGTC 1 cut(s) 272
BmgT120I GGNCC 3 cut(s) 300, 313, 331
BmiI GGNNCC 3 cut(s) 314, 315, 333
BmsI GCATC 1 cut(s) 12
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 3 cut(s) 190, 309, 504
Bse3DI GCAATG 3 cut(s) 171, 201, 285
BseGI GGATG 4 cut(s) 184, 303, 397, 484
BseLI CCNNNNNNNGG 3 cut(s) 190, 309, 504
BseMI GCAATG 3 cut(s) 171, 201, 285
BseMII CTCAG 2 cut(s) 30, 228
BseYI CCCAGC 1 cut(s) 129
BsgI GTGCAG 1 cut(s) 121
BshFI GGCC 1 cut(s) 302
BslFI GGGAC 2 cut(s) 146, 326
BslI CCNNNNNNNGG 3 cut(s) 190, 309, 504
BsmFI GGGAC 2 cut(s) 146, 326
BsnI GGCC 1 cut(s) 302
Bsp1286I GDGCHC 1 cut(s) 389
Bsp1407I TGTACA 1 cut(s) 45
BspANI GGCC 1 cut(s) 302
BspCNI CTCAG 2 cut(s) 31, 229
BspLI GGNNCC 3 cut(s) 314, 315, 333
BsrDI GCAATG 3 cut(s) 171, 201, 285
BsrGI TGTACA 1 cut(s) 45
Bst6I CTCTTC 1 cut(s) 456
BstAPI GCANNNNNTGC 1 cut(s) 227
BstAUI TGTACA 1 cut(s) 45
BstC8I GCNNGC 2 cut(s) 27, 208
BstDEI CTNAG 2 cut(s) 39, 237
BstF5I GGATG 4 cut(s) 184, 303, 397, 484
BstMWI GCNNNNNNNGC 3 cut(s) 135, 227, 416
BstNSI RCATGY 1 cut(s) 103
BstXI CCANNNNNNTGG 1 cut(s) 324
BsuRI GGCC 1 cut(s) 302
BtrI CACGTC 1 cut(s) 272
BtsCI GGATG 4 cut(s) 184, 303, 397, 484
Cac8I GCNNGC 2 cut(s) 27, 208
Cfr13I GGNCC 3 cut(s) 300, 313, 331
Csp6I GTAC 1 cut(s) 46
CspCI CAANNNNNGTGG 2 cut(s) 267, 302
CviAII CATG 4 cut(s) 100, 275, 475, 499
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 2 cut(s) 39, 237
Eam1104I CTCTTC 1 cut(s) 456
EarI CTCTTC 1 cut(s) 456
Eco24I GRGCYC 1 cut(s) 389
Eco47I GGWCC 2 cut(s) 313, 331
EcoO109I RGGNCCY 2 cut(s) 313, 331
EcoT38I GRGCYC 1 cut(s) 389
FaeI CATG 4 cut(s) 103, 278, 478, 502
FaiI YATR 7 cut(s) 59, 101, 276, 360, 399, 476, 500
FaqI GGGAC 2 cut(s) 146, 326
FatI CATG 4 cut(s) 99, 274, 474, 498
FokI GGATG 4 cut(s) 171, 290, 404, 491
FriOI GRGCYC 1 cut(s) 389
FspBI CTAG 1 cut(s) 155
GsaI CCCAGC 1 cut(s) 133
HaeIII GGCC 1 cut(s) 302
Hin1II CATG 4 cut(s) 103, 278, 478, 502
HinfI GANTC 1 cut(s) 69
HphI GGTGA 1 cut(s) 470
Hpy166II GTNNAC 1 cut(s) 48
Hpy188I TCNGA 1 cut(s) 391
Hpy188III TCNNGA 3 cut(s) 155, 188, 307
Hpy8I GTNNAC 1 cut(s) 48
HpyAV CCTTC 5 cut(s) 152, 322, 417, 476, 498
HpyCH4IV ACGT 1 cut(s) 271
HpyCH4V TGCA 5 cut(s) 25, 86, 138, 278, 410
HpyF10VI GCNNNNNNNGC 3 cut(s) 135, 227, 416
HpyF3I CTNAG 2 cut(s) 39, 237
HpySE526I ACGT 1 cut(s) 271
Hsp92II CATG 4 cut(s) 103, 278, 478, 502
KflI GGGWCCC 1 cut(s) 313
LpnPI CCDG 7 cut(s) 51, 115, 201, 320, 330, 363, 405
LweI GCATC 1 cut(s) 12
MaeI CTAG 1 cut(s) 155
MaeII ACGT 1 cut(s) 271
MaeIII GTNAC 1 cut(s) 240
MboII GAAGA 1 cut(s) 473
MhlI GDGCHC 1 cut(s) 389
MluCI AATT 4 cut(s) 81, 405, 429, 466
MnlI CCTC 6 cut(s) 184, 303, 313, 348, 376, 444
MseI TTAA 3 cut(s) 215, 345, 428
MslI CAYNNNNRTG 1 cut(s) 442
MwoI GCNNNNNNNGC 3 cut(s) 135, 227, 416
NlaIII CATG 4 cut(s) 103, 278, 478, 502
NlaIV GGNNCC 3 cut(s) 314, 315, 333
NspI RCATGY 1 cut(s) 103
PciI ACATGT 1 cut(s) 99
PfeI GAWTC 1 cut(s) 69
PpuMI RGGWCCY 2 cut(s) 313, 331
PscI ACATGT 1 cut(s) 99
PsiI TTATAA 1 cut(s) 59
Psp5II RGGWCCY 2 cut(s) 313, 331
PspFI CCCAGC 1 cut(s) 129
PspN4I GGNNCC 3 cut(s) 314, 315, 333
PspPI GGNCC 3 cut(s) 300, 313, 331
PspPPI RGGWCCY 2 cut(s) 313, 331
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
RseI CAYNNNNRTG 1 cut(s) 442
SaqAI TTAA 3 cut(s) 215, 345, 428
Sau96I GGNCC 3 cut(s) 300, 313, 331
SduI GDGCHC 1 cut(s) 389
SetI ASST 7 cut(s) 116, 238, 274, 324, 359, 405, 428
SfaNI GCATC 1 cut(s) 12
SinI GGWCC 2 cut(s) 313, 331
SmiMI CAYNNNNRTG 1 cut(s) 442
Sse9I AATT 4 cut(s) 81, 405, 429, 466
SspMI CTAG 1 cut(s) 155
TaiI ACGT 1 cut(s) 274
TaqI TCGA 1 cut(s) 20
TasI AATT 4 cut(s) 81, 405, 429, 466
TatI WGTACW 1 cut(s) 45
TfiI GAWTC 1 cut(s) 69
Tru1I TTAA 3 cut(s) 215, 345, 428
Tru9I TTAA 3 cut(s) 215, 345, 428
TspDTI ATGAA 1 cut(s) 495
TspGWI ACGGA 1 cut(s) 353
VpaK11BI GGWCC 2 cut(s) 313, 331
XapI RAATTY 1 cut(s) 466
XbaI TCTAGA 1 cut(s) 154
XceI RCATGY 1 cut(s) 103
XspI CTAG 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.