Prupe.1G458100_v2.0.a1

Microtubule-associated protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
38370494 .. 38371504
1011 bp
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UTR
Exon/CDS
Intron
Prupe.1G458100.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 231 bp
ATGAAGAAGGTCGTGGCTGAGGCACTTAGGAAAGTGGCCTTGGTGGAGAGAGATTTGACGGCAACGTATAAAGCTTCGTGTTTGAATGCTTTGGAAAGTTGGAGATTTGATAAGATATATTGTCTTCCCTCATCCCCAATCGGTTGTTTGGTTGCTGAGAAAGGGTATGTGAAGAGCAAAATATATTGTGACTTCAAACATATCGGTAATTATTTTTCTATACGTTGGTGA

Protein Analysis

77

Amino Acids

8.74

Weight (kDa)

9.3

Isoelectric Point (pI)

45.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 85, 196
AjuI GAANNNNNNNTTGG 2 cut(s) 23, 55
AluBI AGCT 1 cut(s) 74
AluI AGCT 1 cut(s) 74
AoxI GGCC 1 cut(s) 36
BbsI GAAGAC 1 cut(s) 116
BbvCI CCTCAGC 1 cut(s) 18
BceAI ACGGC 1 cut(s) 75
BpiI GAAGAC 1 cut(s) 116
Bpu10I CCTNAGC 1 cut(s) 18
BsaJI CCNNGG 1 cut(s) 39
BseDI CCNNGG 1 cut(s) 39
BseGI GGATG 1 cut(s) 131
BseMII CTCAG 2 cut(s) 9, 147
BshFI GGCC 1 cut(s) 38
BsmI GAATGC 1 cut(s) 91
BsnI GGCC 1 cut(s) 38
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 2 cut(s) 10, 148
BspQI GCTCTTC 1 cut(s) 167
BssECI CCNNGG 1 cut(s) 39
BssT1I CCWWGG 1 cut(s) 39
Bst6I CTCTTC 1 cut(s) 167
BstDEI CTNAG 3 cut(s) 18, 26, 156
BstF5I GGATG 1 cut(s) 131
BstV2I GAAGAC 1 cut(s) 116
BsuRI GGCC 1 cut(s) 38
BtsCI GGATG 1 cut(s) 131
CviJI RGCY 3 cut(s) 17, 38, 74
CviKI_1 RGCY 3 cut(s) 17, 38, 74
DdeI CTNAG 3 cut(s) 18, 26, 156
Eam1104I CTCTTC 1 cut(s) 167
EarI CTCTTC 1 cut(s) 167
Eco130I CCWWGG 1 cut(s) 39
EcoT14I CCWWGG 1 cut(s) 39
ErhI CCWWGG 1 cut(s) 39
FaiI YATR 6 cut(s) 69, 118, 168, 184, 201, 221
FokI GGATG 1 cut(s) 118
HaeIII GGCC 1 cut(s) 38
HindIII AAGCTT 1 cut(s) 72
HpyCH4IV ACGT 2 cut(s) 65, 223
HpyF3I CTNAG 3 cut(s) 18, 26, 156
HpySE526I ACGT 2 cut(s) 65, 223
LguI GCTCTTC 1 cut(s) 167
MaeII ACGT 2 cut(s) 65, 223
MaeIII GTNAC 1 cut(s) 188
MboII GAAGA 3 cut(s) 16, 116, 184
MluCI AATT 1 cut(s) 208
MmeI TCCRAC 1 cut(s) 80
MnlI CCTC 2 cut(s) 13, 139
Mva1269I GAATGC 1 cut(s) 91
NmuCI GTSAC 1 cut(s) 188
PciSI GCTCTTC 1 cut(s) 167
PctI GAATGC 1 cut(s) 91
SapI GCTCTTC 1 cut(s) 167
SetI ASST 4 cut(s) 12, 68, 76, 226
SgeI CNNG 3 cut(s) 25, 52, 90
Sse9I AATT 1 cut(s) 208
StyI CCWWGG 1 cut(s) 39
TaiI ACGT 2 cut(s) 68, 226
TasI AATT 1 cut(s) 208
TseFI GTSAC 1 cut(s) 188
Tsp45I GTSAC 1 cut(s) 188
TspDTI ATGAA 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.