Prupe.1G498200_v2.0.a1

Cell division control protein 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
41271720 .. 41274198
2479 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G498200.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 165 bp
ATGTTGATACTTCGAACTTTGAGGGGAAAAGAAAATAGAGTTTCTGTGTTAGTGTTTGATATTCATTATGCTGAGATGGTGAGGAGGAGGCAGACTCTGTTCCCCGGAGACTCTGAGTTCCCACAGTTGCTTCACATTTTCAGAGAAAAGATCAGGAGGGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000082 GO:0000278 GO:0000307 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0009058 GO:0009059 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009888 GO:0009889 GO:0009987 GO:0010016 GO:0010033 GO:0010103 GO:0010154 GO:0010374 GO:0010376 GO:0010389 GO:0010440 GO:0010444 GO:0010468 GO:0010556 GO:0010564 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022414 GO:0023052 GO:0030154 GO:0030332 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032875 GO:0032989 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0040007 GO:0042023 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044843 GO:0046483 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051239 GO:0051716 GO:0051726 GO:0060255 GO:0060560 GO:0061458 GO:0061695 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:0090558 GO:0090626 GO:0090627 GO:0090698 GO:0097472 GO:0099402 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901990 GO:1902494 GO:1902554 GO:1902749 GO:1902806 GO:1902911 GO:1903047 GO:1990234 GO:2000026 GO:2000037 GO:2000112
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

55

Amino Acids

6.55

Weight (kDa)

11.18

Isoelectric Point (pI)

94.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Alw26I GTCTC 1 cut(s) 102
AlwNI CAGNNNCTG 1 cut(s) 97
AsuC2I CCSGG 1 cut(s) 105
AsuHPI GGTGA 1 cut(s) 91
AsuII TTCGAA 1 cut(s) 13
BccI CCATC 1 cut(s) 70
BcnI CCSGG 1 cut(s) 105
BcoDI GTCTC 1 cut(s) 102
Bme1390I CCNGG 1 cut(s) 105
BmrFI CCNGG 1 cut(s) 105
BplI GAGNNNNNCTC 2 cut(s) 79, 111
Bpu14I TTCGAA 1 cut(s) 13
BpuMI CCSGG 1 cut(s) 105
BsaJI CCNNGG 1 cut(s) 103
BseDI CCNNGG 1 cut(s) 103
BseMII CTCAG 2 cut(s) 63, 105
BseRI GAGGAG 2 cut(s) 97, 100
BsiSI CCGG 1 cut(s) 105
BsmAI GTCTC 1 cut(s) 102
Bsp119I TTCGAA 1 cut(s) 13
Bsp143I GATC 1 cut(s) 150
BspCNI CTCAG 2 cut(s) 64, 106
BspT104I TTCGAA 1 cut(s) 13
BssECI CCNNGG 1 cut(s) 103
BssMI GATC 1 cut(s) 150
Bst4CI ACNGT 1 cut(s) 126
BstBI TTCGAA 1 cut(s) 13
BstDEI CTNAG 2 cut(s) 72, 114
BstKTI GATC 1 cut(s) 153
BstMAI GTCTC 1 cut(s) 102
BstMBI GATC 1 cut(s) 150
BstSCI CCNGG 1 cut(s) 103
CaiI CAGNNNCTG 1 cut(s) 97
DdeI CTNAG 2 cut(s) 72, 114
DpnI GATC 1 cut(s) 152
DpnII GATC 1 cut(s) 150
FaiI YATR 1 cut(s) 69
HapII CCGG 1 cut(s) 105
HinfI GANTC 2 cut(s) 94, 110
HpaII CCGG 1 cut(s) 105
HphI GGTGA 1 cut(s) 91
Hpy188I TCNGA 2 cut(s) 115, 143
Hpy188III TCNNGA 1 cut(s) 154
HpyCH4III ACNGT 1 cut(s) 126
HpyF3I CTNAG 2 cut(s) 72, 114
Kzo9I GATC 1 cut(s) 150
LpnPI CCDG 2 cut(s) 118, 139
MalI GATC 1 cut(s) 152
MboI GATC 1 cut(s) 150
MlyI GAGTC 2 cut(s) 88, 104
MnlI CCTC 5 cut(s) 15, 75, 78, 81, 150
MspI CCGG 1 cut(s) 105
MspR9I CCNGG 1 cut(s) 105
NciI CCSGG 1 cut(s) 105
NdeII GATC 1 cut(s) 150
NspV TTCGAA 1 cut(s) 13
PleI GAGTC 2 cut(s) 88, 104
PpsI GAGTC 2 cut(s) 88, 104
PstNI CAGNNNCTG 1 cut(s) 97
Sau3AI GATC 1 cut(s) 150
SchI GAGTC 2 cut(s) 88, 104
ScrFI CCNGG 1 cut(s) 105
SfuI TTCGAA 1 cut(s) 13
SgeI CNNG 2 cut(s) 116, 117
StyD4I CCNGG 1 cut(s) 103
TaaI ACNGT 1 cut(s) 126
TaqI TCGA 1 cut(s) 13
TspDTI ATGAA 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.