Prupe.1G529600_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
43309325 .. 43309435
111 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G529600.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 111 bp
ATGGAGGTTCAGAGGATGAGGCAGCTGATGTTGTTATGGTCTAGAATACAAAGCAACCGCGTGGCCCTCGTGGGTGGGAACCACACCGCCGCCCGATTTTGCACCCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

37

Amino Acids

4.23

Weight (kDa)

12.0

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0029140)

Species Orthologous Gene IDs
prunus_persica Prupe.1G118300_v2.0.a1 Prupe.1G529600_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 60
AciI CCGC 4 cut(s) 58, 87, 90, 106
AluBI AGCT 1 cut(s) 25
AluI AGCT 1 cut(s) 25
AoxI GGCC 1 cut(s) 63
ApeKI GCWGC 1 cut(s) 22
AspS9I GGNCC 1 cut(s) 64
BauI CACGAG 1 cut(s) 68
BbvI GCAGC 1 cut(s) 34
BfaI CTAG 1 cut(s) 42
BisI GCNGC 2 cut(s) 23, 90
BlsI GCNGC 2 cut(s) 24, 91
BmgT120I GGNCC 1 cut(s) 64
BmiI GGNNCC 1 cut(s) 80
BseGI GGATG 1 cut(s) 21
BseXI GCAGC 1 cut(s) 34
Bsh1236I CGCG 1 cut(s) 60
BshFI GGCC 1 cut(s) 65
BsnI GGCC 1 cut(s) 65
BspACI CCGC 4 cut(s) 58, 87, 90, 106
BspANI GGCC 1 cut(s) 65
BspFNI CGCG 1 cut(s) 60
BspLI GGNNCC 1 cut(s) 80
BssSI CACGAG 1 cut(s) 68
Bst2BI CACGAG 1 cut(s) 68
BstF5I GGATG 1 cut(s) 21
BstFNI CGCG 1 cut(s) 60
BstUI CGCG 1 cut(s) 60
BstV1I GCAGC 1 cut(s) 34
BsuRI GGCC 1 cut(s) 65
BtsCI GGATG 1 cut(s) 21
Cfr13I GGNCC 1 cut(s) 64
CviJI RGCY 2 cut(s) 25, 65
CviKI_1 RGCY 2 cut(s) 25, 65
FaiI YATR 1 cut(s) 37
Fnu4HI GCNGC 2 cut(s) 23, 90
FokI GGATG 1 cut(s) 28
Fsp4HI GCNGC 2 cut(s) 23, 90
FspBI CTAG 1 cut(s) 42
GluI GCNGC 2 cut(s) 23, 90
HaeIII GGCC 1 cut(s) 65
Hpy188I TCNGA 1 cut(s) 12
Hpy188III TCNNGA 1 cut(s) 42
HpyCH4V TGCA 1 cut(s) 102
Lsp1109I GCAGC 1 cut(s) 34
MaeI CTAG 1 cut(s) 42
MnlI CCTC 3 cut(s) 6, 12, 77
MspA1I CMGCKG 1 cut(s) 25
MvnI CGCG 1 cut(s) 60
NlaIV GGNNCC 1 cut(s) 80
PkrI GCNGC 2 cut(s) 24, 91
PspN4I GGNNCC 1 cut(s) 80
PspPI GGNCC 1 cut(s) 64
PvuII CAGCTG 1 cut(s) 25
SatI GCNGC 2 cut(s) 23, 90
Sau96I GGNCC 1 cut(s) 64
SetI ASST 2 cut(s) 9, 27
SgeI CNNG 6 cut(s) 54, 71, 73, 80, 82, 105
SsiI CCGC 4 cut(s) 58, 87, 90, 106
SspMI CTAG 1 cut(s) 42
TauI GCSGC 1 cut(s) 92
TseI GCWGC 1 cut(s) 22
XbaI TCTAGA 1 cut(s) 41
XspI CTAG 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.