Prupe.1G551300_v2.0.a1

Cysteine-rich repeat secretory protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Forward (+)
45081751 .. 45083327
1577 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G551300.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 537 bp
ATGAATATCAAGGAGGGGAAAAAAATGAAAAATGCTCTCCCCCAAGCAATAAACTTAAAAATTAAGGTTTGGACTTTACCCTTTACACAACGGGCCAAGTTAAGCGCGCTCACAATATCGGGTCGAGTTCGGGCTACCCCATCGGGCTTGGACCATTTTTATAAGCCTAGTGGATATAGAAGTGGTGTTGTCGAAGGGAAATCTGAAAAAGTACTTTATGCCATGTATGGTCTAGGGCAATGCTGGAATATAATGACGGCCATACATTGTGGAAGATGTGTTAGTGCAGCAGGACAAGAGCTTCGCGTACTTTGTCCTTATATTCGAGGAGCAATAATTTGGTATGAAAATTGCCTCTTAAAATACTCAGATACACATTTCATAGGTATAAGTGACACAGATAATGTGGTTCGTTTGACGAACATAAGATTCATTGGTACTCCCTTGTTGTTTGGTAAGAAAGTTCATGAGTTGTTAACCCACTTATGTTCTAAAGCTTCTGTGAATCTGCTGATGTACCTTTATGGGAAGTTATAG

Protein Analysis

179

Amino Acids

19.97

Weight (kDa)

9.7

Isoelectric Point (pI)

24.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 162
AccII CGCG 2 cut(s) 107, 306
AcoI YGGCCR 1 cut(s) 258
AfaI GTAC 4 cut(s) 213, 309, 439, 518
AluBI AGCT 2 cut(s) 301, 497
AluI AGCT 2 cut(s) 301, 497
AoxI GGCC 2 cut(s) 93, 258
ApeKI GCWGC 1 cut(s) 287
ArsI GACNNNNNNTTYG 2 cut(s) 285, 317
AspLEI GCGC 2 cut(s) 107, 109
AspS9I GGNCC 2 cut(s) 93, 151
AvaII GGWCC 1 cut(s) 151
BbvI GCAGC 1 cut(s) 299
BccI CCATC 1 cut(s) 148
BceAI ACGGC 1 cut(s) 273
BfaI CTAG 2 cut(s) 168, 233
BisI GCNGC 1 cut(s) 288
BlsI GCNGC 1 cut(s) 289
BmcAI AGTACT 1 cut(s) 213
Bme18I GGWCC 1 cut(s) 151
BmgT120I GGNCC 2 cut(s) 93, 151
Bse3DI GCAATG 1 cut(s) 245
BseMI GCAATG 1 cut(s) 245
BseMII CTCAG 1 cut(s) 381
BsePI GCGCGC 1 cut(s) 105
BseRI GAGGAG 1 cut(s) 342
BseXI GCAGC 1 cut(s) 299
BsgI GTGCAG 1 cut(s) 306
Bsh1236I CGCG 2 cut(s) 107, 306
BshFI GGCC 2 cut(s) 95, 260
BsnI GGCC 2 cut(s) 95, 260
BspANI GGCC 2 cut(s) 95, 260
BspCNI CTCAG 1 cut(s) 380
BspFNI CGCG 2 cut(s) 107, 306
BspHI TCATGA 1 cut(s) 466
BsrDI GCAATG 1 cut(s) 245
BssHII GCGCGC 1 cut(s) 105
BstC8I GCNNGC 1 cut(s) 107
BstDEI CTNAG 1 cut(s) 367
BstFNI CGCG 2 cut(s) 107, 306
BstHHI GCGC 2 cut(s) 107, 109
BstUI CGCG 2 cut(s) 107, 306
BstV1I GCAGC 1 cut(s) 299
BsuRI GGCC 2 cut(s) 95, 260
Cac8I GCNNGC 1 cut(s) 107
CciI TCATGA 1 cut(s) 466
CfoI GCGC 2 cut(s) 107, 109
Cfr13I GGNCC 2 cut(s) 93, 151
Csp6I GTAC 4 cut(s) 212, 308, 438, 517
CviAII CATG 2 cut(s) 223, 467
CviJI RGCY 7 cut(s) 95, 134, 147, 166, 260, 301, 497
CviKI_1 RGCY 7 cut(s) 95, 134, 147, 166, 260, 301, 497
CviQI GTAC 4 cut(s) 212, 308, 438, 517
DdeI CTNAG 1 cut(s) 367
EaeI YGGCCR 1 cut(s) 258
Eco47I GGWCC 1 cut(s) 151
FaeI CATG 2 cut(s) 226, 470
FatI CATG 2 cut(s) 222, 466
Fnu4HI GCNGC 1 cut(s) 288
Fsp4HI GCNGC 1 cut(s) 288
FspBI CTAG 2 cut(s) 168, 233
GlaI GCGC 2 cut(s) 106, 108
GluI GCNGC 1 cut(s) 288
HaeIII GGCC 2 cut(s) 95, 260
HhaI GCGC 2 cut(s) 107, 109
Hin1II CATG 2 cut(s) 226, 470
Hin6I GCGC 2 cut(s) 105, 107
HinP1I GCGC 2 cut(s) 105, 107
HincII GTYRAC 1 cut(s) 477
HindII GTYRAC 1 cut(s) 477
HindIII AAGCTT 1 cut(s) 495
HinfI GANTC 2 cut(s) 429, 505
HpaI GTTAAC 1 cut(s) 477
Hpy166II GTNNAC 1 cut(s) 477
Hpy188I TCNGA 2 cut(s) 205, 370
Hpy188III TCNNGA 1 cut(s) 467
Hpy8I GTNNAC 1 cut(s) 477
HpyAV CCTTC 1 cut(s) 188
HpyCH4V TGCA 1 cut(s) 287
HpyF3I CTNAG 1 cut(s) 367
Hsp92II CATG 2 cut(s) 226, 470
HspAI GCGC 2 cut(s) 105, 107
KspAI GTTAAC 1 cut(s) 477
LmnI GCTCC 1 cut(s) 329
LpnPI CCDG 2 cut(s) 229, 276
Lsp1109I GCAGC 1 cut(s) 299
MaeI CTAG 2 cut(s) 168, 233
MaeIII GTNAC 1 cut(s) 392
MboII GAAGA 1 cut(s) 285
MluCI AATT 3 cut(s) 60, 336, 349
MnlI CCTC 3 cut(s) 7, 320, 365
MseI TTAA 5 cut(s) 56, 63, 101, 359, 476
MvnI CGCG 2 cut(s) 107, 306
NlaIII CATG 2 cut(s) 226, 470
NmuCI GTSAC 1 cut(s) 392
PagI TCATGA 1 cut(s) 466
PauI GCGCGC 1 cut(s) 105
PfeI GAWTC 2 cut(s) 429, 505
PkrI GCNGC 1 cut(s) 289
PsiI TTATAA 1 cut(s) 162
PspPI GGNCC 2 cut(s) 93, 151
PteI GCGCGC 1 cut(s) 105
RsaI GTAC 4 cut(s) 213, 309, 439, 518
RsaNI GTAC 4 cut(s) 212, 308, 438, 517
SaqAI TTAA 5 cut(s) 56, 63, 101, 359, 476
SatI GCNGC 1 cut(s) 288
Sau96I GGNCC 2 cut(s) 93, 151
ScaI AGTACT 1 cut(s) 213
SetI ASST 5 cut(s) 69, 303, 388, 499, 522
SinI GGWCC 1 cut(s) 151
Sse9I AATT 3 cut(s) 60, 336, 349
SspMI CTAG 2 cut(s) 168, 233
TaqI TCGA 3 cut(s) 124, 192, 325
TasI AATT 3 cut(s) 60, 336, 349
TatI WGTACW 1 cut(s) 211
TfiI GAWTC 2 cut(s) 429, 505
Tru1I TTAA 5 cut(s) 56, 63, 101, 359, 476
Tru9I TTAA 5 cut(s) 56, 63, 101, 359, 476
TseFI GTSAC 1 cut(s) 392
TseI GCWGC 1 cut(s) 287
Tsp45I GTSAC 1 cut(s) 392
TspDTI ATGAA 6 cut(s) 17, 41, 360, 370, 421, 455
VpaK11BI GGWCC 1 cut(s) 151
XspI CTAG 2 cut(s) 168, 233
ZrmI AGTACT 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.