Prupe.1G555100_v2.0.a1

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
45319402 .. 45321473
2072 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G555100.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 225 bp
ATGGATATTCCATATGTGGGTACTATGTCTTGGATAGAATCTATGAACTTGACTGTTTCATTGGAAGCCATGGTTCGTCGACAGACAGATTGCAGGGTTGATATCTATCTCATCTTCTTTCTTTCTATTTTTTTCATGTCCTTAATCTTTCTTCTGTTTAAGTTGAGTTTGGTCACAAAATCAGATTGCAACTATCTCATAGTTATGCCTTTTTCCCCCCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.67

Weight (kDa)

4.93

Isoelectric Point (pI)

44.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 79
AfaI GTAC 1 cut(s) 22
AfiI CCNNNNNNNGG 1 cut(s) 17
BsaBI GATNNNNATC 1 cut(s) 105
BsaJI CCNNGG 1 cut(s) 69
Bsc4I CCNNNNNNNGG 1 cut(s) 17
Bse8I GATNNNNATC 1 cut(s) 105
BseDI CCNNGG 1 cut(s) 69
BseJI GATNNNNATC 1 cut(s) 105
BseLI CCNNNNNNNGG 1 cut(s) 17
BslI CCNNNNNNNGG 1 cut(s) 17
Bsp19I CCATGG 1 cut(s) 69
BssECI CCNNGG 1 cut(s) 69
BssT1I CCWWGG 1 cut(s) 69
Bst4CI ACNGT 1 cut(s) 55
BstDSI CCRYGG 1 cut(s) 69
BtgI CCRYGG 1 cut(s) 69
Csp6I GTAC 1 cut(s) 21
CviAII CATG 2 cut(s) 70, 136
CviJI RGCY 1 cut(s) 68
CviKI_1 RGCY 1 cut(s) 68
CviQI GTAC 1 cut(s) 21
Eco130I CCWWGG 1 cut(s) 69
Eco32I GATATC 1 cut(s) 103
EcoRV GATATC 1 cut(s) 103
EcoT14I CCWWGG 1 cut(s) 69
ErhI CCWWGG 1 cut(s) 69
FaeI CATG 2 cut(s) 73, 139
FaiI YATR 8 cut(s) 13, 15, 26, 44, 71, 137, 200, 206
FatI CATG 2 cut(s) 69, 135
FauNDI CATATG 1 cut(s) 13
FblI GTMKAC 1 cut(s) 79
Hin1II CATG 2 cut(s) 73, 139
HincII GTYRAC 1 cut(s) 80
HindII GTYRAC 1 cut(s) 80
HinfI GANTC 1 cut(s) 38
Hpy166II GTNNAC 1 cut(s) 80
Hpy188I TCNGA 1 cut(s) 184
Hpy8I GTNNAC 1 cut(s) 80
Hpy99I CGWCG 1 cut(s) 81
HpyCH4III ACNGT 1 cut(s) 55
HpyCH4V TGCA 2 cut(s) 93, 189
Hsp92II CATG 2 cut(s) 73, 139
LpnPI CCDG 1 cut(s) 79
MaeIII GTNAC 1 cut(s) 172
MboII GAAGA 2 cut(s) 106, 143
MseI TTAA 2 cut(s) 143, 159
MslI CAYNNNNRTG 1 cut(s) 203
NcoI CCATGG 1 cut(s) 69
NdeI CATATG 1 cut(s) 13
NlaIII CATG 2 cut(s) 73, 139
NmuCI GTSAC 1 cut(s) 172
PfeI GAWTC 1 cut(s) 38
RsaI GTAC 1 cut(s) 22
RsaNI GTAC 1 cut(s) 21
RseI CAYNNNNRTG 1 cut(s) 203
SalI GTCGAC 1 cut(s) 78
SaqAI TTAA 2 cut(s) 143, 159
SgeI CNNG 5 cut(s) 42, 61, 82, 106, 148
SmiMI CAYNNNNRTG 1 cut(s) 203
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 1 cut(s) 55
TaqI TCGA 1 cut(s) 79
TfiI GAWTC 1 cut(s) 38
Tru1I TTAA 2 cut(s) 143, 159
Tru9I TTAA 2 cut(s) 143, 159
TseFI GTSAC 1 cut(s) 172
Tsp45I GTSAC 1 cut(s) 172
TspDTI ATGAA 3 cut(s) 48, 59, 124
XmiI GTMKAC 1 cut(s) 79
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.