Prupe.1G567700_v2.0.a1

Memo-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
N/A
Physical Location & Seq
Reverse (-)
46306237 .. 46307458
1222 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G567700.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 225 bp
ATGCTGAAAAACTGTTCAACGAGCATAAAGATCAATTTTCTCTGGCATGAGCAGTCGAGTCAGTGCAAAACTATGAGGGATAGCAGCGTAAGTTATGCATCTGCGGCAGCAAAGGTAGATATGCTTGAAAATGTATTCTCCTTTGAGACATCCAGCAATTTGATTATCATCAAATTGACTGTAATGTTTAACCCAAGTAAATATGCATTTCATGAACCCTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.38

Weight (kDa)

7.8

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 104
AgsI TTSAA 2 cut(s) 18, 128
Alw26I GTCTC 1 cut(s) 140
ApeKI GCWGC 2 cut(s) 84, 107
BbvI GCAGC 2 cut(s) 96, 119
BcoDI GTCTC 1 cut(s) 140
BisI GCNGC 3 cut(s) 85, 105, 108
BlsI GCNGC 3 cut(s) 86, 106, 109
BmsI GCATC 1 cut(s) 107
BsaBI GATNNNNATC 1 cut(s) 167
Bse8I GATNNNNATC 1 cut(s) 167
BseGI GGATG 1 cut(s) 149
BseJI GATNNNNATC 1 cut(s) 167
BseXI GCAGC 2 cut(s) 96, 119
BsmAI GTCTC 1 cut(s) 140
Bsp143I GATC 1 cut(s) 30
BspACI CCGC 1 cut(s) 104
BspHI TCATGA 1 cut(s) 211
BssMI GATC 1 cut(s) 30
Bst4CI ACNGT 2 cut(s) 14, 181
BstF5I GGATG 1 cut(s) 149
BstKTI GATC 1 cut(s) 33
BstMAI GTCTC 1 cut(s) 140
BstMBI GATC 1 cut(s) 30
BstMWI GCNNNNNNNGC 1 cut(s) 104
BstV1I GCAGC 2 cut(s) 96, 119
BtsCI GGATG 1 cut(s) 149
BtsIMutI CAGTG 1 cut(s) 68
CciI TCATGA 1 cut(s) 211
CviAII CATG 2 cut(s) 47, 212
DpnI GATC 1 cut(s) 32
DpnII GATC 1 cut(s) 30
EcoT22I ATGCAT 2 cut(s) 100, 208
FaeI CATG 2 cut(s) 50, 215
FaiI YATR 8 cut(s) 26, 48, 74, 96, 122, 204, 213, 223
FatI CATG 2 cut(s) 46, 211
Fnu4HI GCNGC 3 cut(s) 85, 105, 108
FokI GGATG 1 cut(s) 136
Fsp4HI GCNGC 3 cut(s) 85, 105, 108
FspEI CC 9 cut(s) 28, 61, 62, 89, 98, 154, 166, 206, 207
GluI GCNGC 3 cut(s) 85, 105, 108
Hin1II CATG 2 cut(s) 50, 215
HinfI GANTC 1 cut(s) 58
Hpy188III TCNNGA 1 cut(s) 212
HpyCH4III ACNGT 2 cut(s) 14, 181
HpyCH4V TGCA 3 cut(s) 66, 98, 206
HpyF10VI GCNNNNNNNGC 1 cut(s) 104
Hsp92II CATG 2 cut(s) 50, 215
Kzo9I GATC 1 cut(s) 30
LpnPI CCDG 2 cut(s) 28, 166
Lsp1109I GCAGC 2 cut(s) 96, 119
LweI GCATC 1 cut(s) 107
MalI GATC 1 cut(s) 32
MboI GATC 1 cut(s) 30
MluCI AATT 3 cut(s) 34, 157, 173
MlyI GAGTC 1 cut(s) 67
MnlI CCTC 1 cut(s) 69
Mph1103I ATGCAT 2 cut(s) 100, 208
MseI TTAA 1 cut(s) 189
MwoI GCNNNNNNNGC 1 cut(s) 104
NdeII GATC 1 cut(s) 30
NlaIII CATG 2 cut(s) 50, 215
NsiI ATGCAT 2 cut(s) 100, 208
PagI TCATGA 1 cut(s) 211
PkrI GCNGC 3 cut(s) 86, 106, 109
PleI GAGTC 1 cut(s) 66
PpsI GAGTC 1 cut(s) 66
SaqAI TTAA 1 cut(s) 189
SatI GCNGC 3 cut(s) 85, 105, 108
Sau3AI GATC 1 cut(s) 30
SchI GAGTC 1 cut(s) 67
SetI ASST 1 cut(s) 117
SfaNI GCATC 1 cut(s) 107
SgeI CNNG 7 cut(s) 33, 55, 59, 69, 137, 165, 207
Sse9I AATT 3 cut(s) 34, 157, 173
SsiI CCGC 1 cut(s) 104
TaaI ACNGT 2 cut(s) 14, 181
TaqI TCGA 1 cut(s) 56
TasI AATT 3 cut(s) 34, 157, 173
TauI GCSGC 1 cut(s) 107
Tru1I TTAA 1 cut(s) 189
Tru9I TTAA 1 cut(s) 189
TscAI CASTG 1 cut(s) 68
TseI GCWGC 2 cut(s) 84, 107
TspDTI ATGAA 1 cut(s) 200
TspRI CASTG 1 cut(s) 68
Zsp2I ATGCAT 2 cut(s) 100, 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.