Prupe.3G000800_v2.0.a1

Haloacid dehalogenase-like hydrolase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
91450 .. 93176
1727 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G000800.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 447 bp
ATGCATTGGTTCGTGATGTGGGTAGATGGTACAATGCATCTATGGCCTTCTCCTTGGCTATATAAAGGGAGGTTTGTTCTGAAATCAAGTAGGTCATCAAGGTATCAACTCAAGTGTGAGTGTGATTCACTAGGGAGTTGGGTCTGTATTAAGAGTGTGTATATCTCCATAGAAGTGTTTTTTGACCTATTCAGAATCACTCCCAAACGAGCCCTAAAATGCTTCTATTGTTGTTTTCAGATCTTCACTAATGTTGACAAGGTGCATGCAGCTCAAGTTCTCAACATGCTGGGCTTGGAAGACTGGTTTGAAGGCCTTTTATGCTTTGAAACTCTTAACCCTCCTCACCTCGAACCAATTGATTGCATGATGGCATCAGATTCTCTACAAACCCTCATCACCTTGAACGAACTAAATGGTCATCACAGAACGTACACCAGAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

149

Amino Acids

17.4

Weight (kDa)

6.98

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 31, 434
AgsI TTSAA 3 cut(s) 311, 329, 406
AluBI AGCT 1 cut(s) 272
AluI AGCT 1 cut(s) 272
AoxI GGCC 2 cut(s) 44, 313
ApeKI GCWGC 1 cut(s) 269
AsuHPI GGTGA 2 cut(s) 338, 391
BanII GRGCYC 1 cut(s) 214
BbsI GAAGAC 1 cut(s) 306
BbvI GCAGC 1 cut(s) 281
BccI CCATC 2 cut(s) 20, 364
BfaI CTAG 1 cut(s) 131
BglII AGATCT 1 cut(s) 240
BisI GCNGC 1 cut(s) 270
BlsI GCNGC 1 cut(s) 271
BmsI GCATC 2 cut(s) 46, 383
BpiI GAAGAC 1 cut(s) 306
BpuEI CTTGAG 2 cut(s) 95, 258
BsaJI CCNNGG 1 cut(s) 53
Bse1I ACTGG 1 cut(s) 308
BseDI CCNNGG 1 cut(s) 53
BseNI ACTGG 1 cut(s) 308
BseRI GAGGAG 1 cut(s) 333
BseXI GCAGC 1 cut(s) 281
BseYI CCCAGC 1 cut(s) 289
BshFI GGCC 2 cut(s) 46, 315
BsnI GGCC 2 cut(s) 46, 315
Bsp1286I GDGCHC 1 cut(s) 214
Bsp143I GATC 1 cut(s) 240
BspANI GGCC 2 cut(s) 46, 315
BsrI ACTGG 1 cut(s) 308
BssECI CCNNGG 1 cut(s) 53
BssMI GATC 1 cut(s) 240
BssT1I CCWWGG 1 cut(s) 53
BstC8I GCNNGC 1 cut(s) 267
BstKTI GATC 1 cut(s) 243
BstMBI GATC 1 cut(s) 240
BstMWI GCNNNNNNNGC 2 cut(s) 43, 321
BstNSI RCATGY 2 cut(s) 269, 289
BstV1I GCAGC 1 cut(s) 281
BstV2I GAAGAC 1 cut(s) 306
BstX2I RGATCY 1 cut(s) 240
BstYI RGATCY 1 cut(s) 240
BsuRI GGCC 2 cut(s) 46, 315
Cac8I GCNNGC 1 cut(s) 267
Csp6I GTAC 2 cut(s) 30, 433
CviAII CATG 3 cut(s) 266, 286, 367
CviJI RGCY 7 cut(s) 46, 58, 212, 272, 294, 315, 444
CviKI_1 RGCY 7 cut(s) 46, 58, 212, 272, 294, 315, 444
CviQI GTAC 2 cut(s) 30, 433
DpnI GATC 1 cut(s) 242
DpnII GATC 1 cut(s) 240
Eco130I CCWWGG 1 cut(s) 53
Eco147I AGGCCT 1 cut(s) 315
Eco24I GRGCYC 1 cut(s) 214
EcoT14I CCWWGG 1 cut(s) 53
EcoT22I ATGCAT 2 cut(s) 6, 39
EcoT38I GRGCYC 1 cut(s) 214
ErhI CCWWGG 1 cut(s) 53
FaeI CATG 3 cut(s) 269, 289, 370
FaiI YATR 9 cut(s) 43, 61, 63, 162, 170, 267, 287, 322, 368
FatI CATG 3 cut(s) 265, 285, 366
Fnu4HI GCNGC 1 cut(s) 270
FriOI GRGCYC 1 cut(s) 214
Fsp4HI GCNGC 1 cut(s) 270
FspBI CTAG 1 cut(s) 131
GluI GCNGC 1 cut(s) 270
GsaI CCCAGC 1 cut(s) 293
HaeIII GGCC 2 cut(s) 46, 315
Hin1II CATG 3 cut(s) 269, 289, 370
HincII GTYRAC 1 cut(s) 256
HindII GTYRAC 1 cut(s) 256
HinfI GANTC 3 cut(s) 125, 195, 380
HphI GGTGA 2 cut(s) 338, 391
Hpy166II GTNNAC 2 cut(s) 256, 435
Hpy188I TCNGA 4 cut(s) 81, 194, 240, 379
Hpy188III TCNNGA 1 cut(s) 13
Hpy8I GTNNAC 2 cut(s) 256, 435
HpyAV CCTTC 2 cut(s) 57, 305
HpyCH4IV ACGT 1 cut(s) 431
HpyCH4V TGCA 5 cut(s) 4, 37, 265, 269, 366
HpyF10VI GCNNNNNNNGC 2 cut(s) 43, 321
HpySE526I ACGT 1 cut(s) 431
Hsp92II CATG 3 cut(s) 269, 289, 370
Kzo9I GATC 1 cut(s) 240
LpnPI CCDG 2 cut(s) 275, 289
Lsp1109I GCAGC 1 cut(s) 281
LweI GCATC 2 cut(s) 46, 383
MaeI CTAG 1 cut(s) 131
MaeII ACGT 1 cut(s) 431
MalI GATC 1 cut(s) 242
MboI GATC 1 cut(s) 240
MboII GAAGA 2 cut(s) 235, 311
MfeI CAATTG 1 cut(s) 357
MflI RGATCY 1 cut(s) 240
MhlI GDGCHC 1 cut(s) 214
MluCI AATT 1 cut(s) 357
MnlI CCTC 6 cut(s) 63, 351, 354, 359, 404, 434
Mph1103I ATGCAT 2 cut(s) 6, 39
MseI TTAA 2 cut(s) 150, 336
MslI CAYNNNNRTG 1 cut(s) 173
MunI CAATTG 1 cut(s) 357
MwoI GCNNNNNNNGC 2 cut(s) 43, 321
NdeII GATC 1 cut(s) 240
NlaIII CATG 3 cut(s) 269, 289, 370
NsiI ATGCAT 2 cut(s) 6, 39
NspI RCATGY 2 cut(s) 269, 289
PaeI GCATGC 1 cut(s) 269
PceI AGGCCT 1 cut(s) 315
PfeI GAWTC 3 cut(s) 125, 195, 380
PkrI GCNGC 1 cut(s) 271
PspFI CCCAGC 1 cut(s) 289
PsuI RGATCY 1 cut(s) 240
RsaI GTAC 2 cut(s) 31, 434
RsaNI GTAC 2 cut(s) 30, 433
RseI CAYNNNNRTG 1 cut(s) 173
SaqAI TTAA 2 cut(s) 150, 336
SatI GCNGC 1 cut(s) 270
Sau3AI GATC 1 cut(s) 240
SduI GDGCHC 1 cut(s) 214
SetI ASST 9 cut(s) 74, 95, 104, 189, 264, 274, 351, 404, 434
SfaNI GCATC 2 cut(s) 46, 383
SmiMI CAYNNNNRTG 1 cut(s) 173
SmlI CTYRAG 2 cut(s) 110, 273
SmoI CTYRAG 2 cut(s) 110, 273
SphI GCATGC 1 cut(s) 269
Sse9I AATT 1 cut(s) 357
SseBI AGGCCT 1 cut(s) 315
SspMI CTAG 1 cut(s) 131
StuI AGGCCT 1 cut(s) 315
StyI CCWWGG 1 cut(s) 53
TaiI ACGT 1 cut(s) 434
TaqI TCGA 1 cut(s) 351
TasI AATT 1 cut(s) 357
TfiI GAWTC 3 cut(s) 125, 195, 380
Tru1I TTAA 2 cut(s) 150, 336
Tru9I TTAA 2 cut(s) 150, 336
TseI GCWGC 1 cut(s) 269
XceI RCATGY 2 cut(s) 269, 289
XspI CTAG 1 cut(s) 131
Zsp2I ATGCAT 2 cut(s) 6, 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.