Prupe.3G036200_v2.0.a1

glycerol-3-phosphate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
2620759 .. 2622939
2181 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G036200.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 1086 bp
ATGCTCCTGCTTGATCTTGCATTTCTTTCTGCCTATTCGATTGGAATGTACTTTGCAGGGCATGTTGGTGATCGGATTGATTTGAGGTTGTTTCTTGTGTTTGGGATGATGTCTGCAGTGGTGGGAAACTGGTTTGAGAAAGAAAAGAGGGGGTTGATCATGGGGATCTGGAGTTCACATACCTCAGTTGGAAACATTATTGATTCAGTTGTGGCGTCTGGGGTTTTGGAATTTGGATGGGGCTGGTCCTTTGTGGTGCCTGGGGTTTTGGTCATTTTGGTCGGCATTTTAGTGTTTTTGTTTCTCCCCGTGAATCCAGAAGACTTGGGATTTGAGTCTCGGGTAAAGGAGATTCAGATGAATATGGAAGTTAATGGGATAGAGAATTTGGAGGGAAAAGTGGAATCAGACGAAGCAGGTCTTCTTGGAACAGAGAATGTAGATGTCGATACAAGCGCAGATACTTTGGCTGCAATTGGCTTTTGGGAGGCATGGAGGTTACCGGGCGTGGCACCATTTGCTCTCTGCCTGTTCTTTTCAAAGTTGGTGTCTTACACTTTCTTGTACTGGTTGCCCTTTTACGTAAGGCACACAGCCGTATTTGATATTGGAGGAGTCTTTGGTGGAATTTTAGCAGGATTGATATCTGATACGATCGAAGCTCGAGCTGTAACGTCAATTACATTTTTGTTGCTTTCAGTTCCAGCCCTTGTTTTCTACTGGGTTTATGGAAGCCTATCTATGGTTGCCAATATTCTTTTGATGTTTCTTTCTGGATTGCTGGTGAACGGCCCATATTCACTCATTACAACAGCCGTTGCTGCAGATCTTGTGATCAGAGGAAATTCCCATGCAGTAGCTACTGTGACTGCAATTATAGATGCACAATTTCACATCATTGTCCTCTTGGAGTCTCCTTCGAGCAAAAGCAACAGCATTTTGGCTCGTGAACACATCCCATATTCCATCACTACCAATTATCAAAAACTAATCATCCTTGCCGCTCCACATCGTGACAATACAGCCCGCCAATCTCCGGCATTTGCCACAAGCAAACACCTGTCCAAAAGGACAATTATAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0042592 GO:0048878 GO:0050801 GO:0055062 GO:0055081 GO:0055083 GO:0065007 GO:0065008 GO:0072505 GO:0072506 GO:0098771
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1

Protein Analysis

362

Amino Acids

39.4

Weight (kDa)

5.34

Isoelectric Point (pI)

34.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1079
Acc36I ACCTGC 1 cut(s) 407
AccB1I GGYRCC 2 cut(s) 256, 511
AccBSI CCGCTC 1 cut(s) 1004
AciI CCGC 2 cut(s) 1002, 1027
AclWI GGATC 1 cut(s) 173
AcsI RAATTY 4 cut(s) 230, 385, 627, 844
AcyI GRCGYC 1 cut(s) 215
AdeI CACNNNGTG 1 cut(s) 1013
AfaI GTAC 2 cut(s) 50, 566
AfiI CCNNNNNNNGG 2 cut(s) 742, 1036
AgsI TTSAA 1 cut(s) 540
AjnI CCWGG 1 cut(s) 259
AloI GAACNNNNNNTCC 2 cut(s) 157, 189
AluBI AGCT 4 cut(s) 662, 668, 860, 1083
AluI AGCT 4 cut(s) 662, 668, 860, 1083
Alw26I GTCTC 2 cut(s) 342, 918
AlwI GGATC 1 cut(s) 173
Ama87I CYCGRG 2 cut(s) 339, 663
AoxI GGCC 1 cut(s) 790
ApeKI GCWGC 2 cut(s) 470, 821
ApoI RAATTY 4 cut(s) 230, 385, 627, 844
ArsI GACNNNNNNTTYG 4 cut(s) 314, 346, 533, 565
AspLEI GCGC 1 cut(s) 458
AspS9I GGNCC 2 cut(s) 246, 791
AsuC2I CCSGG 1 cut(s) 504
AsuHPI GGTGA 2 cut(s) 80, 796
AvaI CYCGRG 2 cut(s) 339, 663
AvaII GGWCC 1 cut(s) 246
BanI GGYRCC 2 cut(s) 256, 511
BauI CACGAG 1 cut(s) 945
BbsI GAAGAC 2 cut(s) 327, 413
BbvI GCAGC 2 cut(s) 457, 808
BccI CCATC 2 cut(s) 231, 974
BceAI ACGGC 3 cut(s) 581, 800, 805
BciT130I CCWGG 1 cut(s) 261
BclI TGATCA 2 cut(s) 156, 834
BcnI CCSGG 1 cut(s) 504
BcoDI GTCTC 2 cut(s) 342, 918
BfmI CTRYAG 2 cut(s) 114, 822
BfuAI ACCTGC 1 cut(s) 407
BglII AGATCT 1 cut(s) 826
BisI GCNGC 3 cut(s) 471, 822, 1002
BlsI GCNGC 3 cut(s) 472, 823, 1003
Bme1390I CCNGG 2 cut(s) 261, 504
Bme18I GGWCC 1 cut(s) 246
BmeT110I CYCGRG 2 cut(s) 339, 663
BmgT120I GGNCC 2 cut(s) 246, 791
BmiI GGNNCC 2 cut(s) 258, 513
BmrFI CCNGG 2 cut(s) 261, 504
BmrI ACTGGG 1 cut(s) 730
BmsI GCATC 1 cut(s) 871
BmuI ACTGGG 1 cut(s) 730
BpiI GAAGAC 2 cut(s) 327, 413
BpmI CTGGAG 1 cut(s) 190
BpuMI CCSGG 1 cut(s) 504
BsaAI YACGTR 1 cut(s) 583
BsaBI GATNNNNATC 1 cut(s) 643
BsaHI GRCGYC 1 cut(s) 215
BsaJI CCNNGG 1 cut(s) 260
Bsc4I CCNNNNNNNGG 2 cut(s) 742, 1036
Bse1I ACTGG 3 cut(s) 134, 572, 725
Bse8I GATNNNNATC 1 cut(s) 643
BseBI CCWGG 1 cut(s) 261
BseDI CCNNGG 1 cut(s) 260
BseGI GGATG 4 cut(s) 111, 242, 954, 993
BseJI GATNNNNATC 1 cut(s) 643
BseLI CCNNNNNNNGG 2 cut(s) 742, 1036
BseMII CTCAG 1 cut(s) 198
BseNI ACTGG 3 cut(s) 134, 572, 725
BseRI GAGGAG 1 cut(s) 627
BseXI GCAGC 2 cut(s) 457, 808
Bsh1285I CGRYCG 1 cut(s) 657
BshFI GGCC 1 cut(s) 792
BshNI GGYRCC 2 cut(s) 256, 511
BsiEI CGRYCG 1 cut(s) 657
BsiHKCI CYCGRG 2 cut(s) 339, 663
BsiSI CCGG 2 cut(s) 503, 1037
BslI CCNNNNNNNGG 2 cut(s) 742, 1036
BsmAI GTCTC 2 cut(s) 342, 918
BsnI GGCC 1 cut(s) 792
BsoBI CYCGRG 2 cut(s) 339, 663
Bsp143I GATC 7 cut(s) 13, 70, 156, 165, 654, 826, 834
BspACI CCGC 2 cut(s) 1002, 1027
BspANI GGCC 1 cut(s) 792
BspCNI CTCAG 1 cut(s) 197
BspLI GGNNCC 2 cut(s) 258, 513
BspMAI CTGCAG 2 cut(s) 118, 826
BspMI ACCTGC 1 cut(s) 407
BspPI GGATC 1 cut(s) 173
BspT107I GGYRCC 2 cut(s) 256, 511
BsrBI CCGCTC 1 cut(s) 1004
BsrI ACTGG 3 cut(s) 134, 572, 725
BssECI CCNNGG 1 cut(s) 260
BssMI GATC 7 cut(s) 13, 70, 156, 165, 654, 826, 834
BssNI GRCGYC 1 cut(s) 215
BssSI CACGAG 1 cut(s) 945
Bst2BI CACGAG 1 cut(s) 945
Bst2UI CCWGG 1 cut(s) 261
Bst4CI ACNGT 1 cut(s) 865
BstACI GRCGYC 1 cut(s) 215
BstAPI GCANNNNNTGC 1 cut(s) 518
BstBAI YACGTR 1 cut(s) 583
BstC8I GCNNGC 1 cut(s) 1027
BstDEI CTNAG 1 cut(s) 184
BstEII GGTNACC 1 cut(s) 498
BstF5I GGATG 4 cut(s) 111, 242, 954, 993
BstHHI GCGC 1 cut(s) 458
BstKTI GATC 7 cut(s) 16, 73, 159, 168, 657, 829, 837
BstMAI GTCTC 2 cut(s) 342, 918
BstMBI GATC 7 cut(s) 13, 70, 156, 165, 654, 826, 834
BstMCI CGRYCG 1 cut(s) 657
BstMWI GCNNNNNNNGC 2 cut(s) 518, 821
BstNI CCWGG 1 cut(s) 261
BstNSI RCATGY 1 cut(s) 65
BstPI GGTNACC 1 cut(s) 498
BstSCI CCNGG 2 cut(s) 259, 502
BstSFI CTRYAG 2 cut(s) 114, 822
BstSNI TACGTA 1 cut(s) 583
BstV1I GCAGC 2 cut(s) 457, 808
BstV2I GAAGAC 2 cut(s) 327, 413
BstX2I RGATCY 2 cut(s) 165, 826
BstYI RGATCY 2 cut(s) 165, 826
BsuRI GGCC 1 cut(s) 792
BtsCI GGATG 4 cut(s) 111, 242, 954, 993
BtsI GCAGTG 1 cut(s) 123
BtsIMutI CAGTG 1 cut(s) 123
BveI ACCTGC 1 cut(s) 407
Cac8I GCNNGC 1 cut(s) 1027
CfoI GCGC 1 cut(s) 458
Cfr13I GGNCC 2 cut(s) 246, 791
CseI GACGC 1 cut(s) 204
Csp6I GTAC 2 cut(s) 49, 565
CviAII CATG 4 cut(s) 62, 160, 492, 851
CviQI GTAC 2 cut(s) 49, 565
DdeI CTNAG 1 cut(s) 184
DpnI GATC 7 cut(s) 15, 72, 158, 167, 656, 828, 836
DpnII GATC 7 cut(s) 13, 70, 156, 165, 654, 826, 834
DraIII CACNNNGTG 1 cut(s) 1013
Eco105I TACGTA 1 cut(s) 583
Eco32I GATATC 1 cut(s) 645
Eco47I GGWCC 1 cut(s) 246
Eco88I CYCGRG 2 cut(s) 339, 663
Eco91I GGTNACC 1 cut(s) 498
EcoO65I GGTNACC 1 cut(s) 498
EcoRII CCWGG 1 cut(s) 259
EcoRV GATATC 1 cut(s) 645
FaeI CATG 4 cut(s) 65, 163, 495, 854
FalI AAGNNNNNCTT 2 cut(s) 405, 437
FatI CATG 4 cut(s) 61, 159, 491, 850
FauI CCCGC 1 cut(s) 1034
FbaI TGATCA 2 cut(s) 156, 834
Fnu4HI GCNGC 3 cut(s) 471, 822, 1002
FokI GGATG 4 cut(s) 118, 249, 941, 980
Fsp4HI GCNGC 3 cut(s) 471, 822, 1002
GlaI GCGC 1 cut(s) 457
GluI GCNGC 3 cut(s) 471, 822, 1002
GsuI CTGGAG 1 cut(s) 190
HaeIII GGCC 1 cut(s) 792
HapII CCGG 2 cut(s) 503, 1037
HgaI GACGC 1 cut(s) 204
HhaI GCGC 1 cut(s) 458
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 4 cut(s) 65, 163, 495, 854
Hin6I GCGC 1 cut(s) 456
HinP1I GCGC 1 cut(s) 456
HinfI GANTC 7 cut(s) 203, 313, 335, 352, 404, 615, 911
HpaII CCGG 2 cut(s) 503, 1037
HphI GGTGA 2 cut(s) 80, 796
Hpy166II GTNNAC 3 cut(s) 176, 787, 950
Hpy188I TCNGA 5 cut(s) 75, 357, 409, 649, 839
Hpy188III TCNNGA 5 cut(s) 169, 317, 774, 947, 1013
Hpy8I GTNNAC 3 cut(s) 176, 787, 950
HpyAV CCTTC 1 cut(s) 927
HpyCH4III ACNGT 1 cut(s) 865
HpyCH4IV ACGT 2 cut(s) 582, 674
HpyCH4V TGCA 8 cut(s) 20, 56, 116, 473, 824, 854, 872, 884
HpyF10VI GCNNNNNNNGC 2 cut(s) 518, 821
HpyF3I CTNAG 1 cut(s) 184
HpySE526I ACGT 2 cut(s) 582, 674
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 4 cut(s) 65, 163, 495, 854
HspAI GCGC 1 cut(s) 456
Ksp22I TGATCA 2 cut(s) 156, 834
Kzo9I GATC 7 cut(s) 13, 70, 156, 165, 654, 826, 834
LmnI GCTCC 2 cut(s) 9, 1009
Lsp1109I GCAGC 2 cut(s) 457, 808
LweI GCATC 1 cut(s) 871
MaeII ACGT 2 cut(s) 582, 674
MaeIII GTNAC 4 cut(s) 498, 670, 865, 1013
MalI GATC 7 cut(s) 15, 72, 158, 167, 656, 828, 836
MbiI CCGCTC 1 cut(s) 1004
MboI GATC 7 cut(s) 13, 70, 156, 165, 654, 826, 834
MboII GAAGA 2 cut(s) 332, 413
MfeI CAATTG 1 cut(s) 474
MflI RGATCY 2 cut(s) 165, 826
MlyI GAGTC 3 cut(s) 344, 624, 920
MmeI TCCRAC 1 cut(s) 169
MnlI CCTC 9 cut(s) 78, 141, 193, 385, 481, 489, 605, 833, 914
MseI TTAA 1 cut(s) 372
MslI CAYNNNNRTG 2 cut(s) 66, 290
MspI CCGG 2 cut(s) 503, 1037
MspR9I CCNGG 2 cut(s) 261, 504
MunI CAATTG 1 cut(s) 474
MvaI CCWGG 1 cut(s) 261
MwoI GCNNNNNNNGC 2 cut(s) 518, 821
NciI CCSGG 1 cut(s) 504
NdeII GATC 7 cut(s) 13, 70, 156, 165, 654, 826, 834
NlaIII CATG 4 cut(s) 65, 163, 495, 854
NlaIV GGNNCC 2 cut(s) 258, 513
NmuCI GTSAC 2 cut(s) 865, 1013
NspI RCATGY 1 cut(s) 65
PaeR7I CTCGAG 1 cut(s) 663
PfeI GAWTC 4 cut(s) 203, 313, 352, 404
PkrI GCNGC 3 cut(s) 472, 823, 1003
Ple19I CGATCG 1 cut(s) 657
PleI GAGTC 3 cut(s) 343, 623, 919
PpsI GAGTC 3 cut(s) 343, 623, 919
Ppu21I YACGTR 1 cut(s) 583
PsiI TTATAA 1 cut(s) 1079
Psp6I CCWGG 1 cut(s) 259
PspEI GGTNACC 1 cut(s) 498
PspGI CCWGG 1 cut(s) 259
PspN4I GGNNCC 2 cut(s) 258, 513
PspPI GGNCC 2 cut(s) 246, 791
PspXI VCTCGAGB 1 cut(s) 663
PstI CTGCAG 2 cut(s) 118, 826
PsuI RGATCY 2 cut(s) 165, 826
PvuI CGATCG 1 cut(s) 657
RsaI GTAC 2 cut(s) 50, 566
RsaNI GTAC 2 cut(s) 49, 565
RseI CAYNNNNRTG 2 cut(s) 66, 290
SaqAI TTAA 1 cut(s) 372
SatI GCNGC 3 cut(s) 471, 822, 1002
Sau3AI GATC 7 cut(s) 13, 70, 156, 165, 654, 826, 834
Sau96I GGNCC 2 cut(s) 246, 791
SchI GAGTC 3 cut(s) 344, 624, 920
ScrFI CCNGG 2 cut(s) 261, 504
SfaNI GCATC 1 cut(s) 871
SfcI CTRYAG 2 cut(s) 114, 822
Sfr274I CTCGAG 1 cut(s) 663
SinI GGWCC 1 cut(s) 246
SlaI CTCGAG 1 cut(s) 663
SmiMI CAYNNNNRTG 2 cut(s) 66, 290
SmlI CTYRAG 1 cut(s) 663
SmoI CTYRAG 1 cut(s) 663
SnaBI TACGTA 1 cut(s) 583
SsiI CCGC 2 cut(s) 1002, 1027
SspI AATATT 1 cut(s) 754
StyD4I CCNGG 2 cut(s) 259, 502
TaaI ACNGT 1 cut(s) 865
TaiI ACGT 2 cut(s) 585, 677
TaqI TCGA 5 cut(s) 38, 447, 657, 664, 920
TatI WGTACW 2 cut(s) 48, 564
TauI GCSGC 1 cut(s) 1004
TfiI GAWTC 4 cut(s) 203, 313, 352, 404
Tru1I TTAA 1 cut(s) 372
Tru9I TTAA 1 cut(s) 372
TscAI CASTG 1 cut(s) 123
TseFI GTSAC 2 cut(s) 865, 1013
TseI GCWGC 2 cut(s) 470, 821
Tsp45I GTSAC 2 cut(s) 865, 1013
TspDTI ATGAA 1 cut(s) 374
TspRI CASTG 1 cut(s) 123
VpaK11BI GGWCC 1 cut(s) 246
XapI RAATTY 4 cut(s) 230, 385, 627, 844
XceI RCATGY 1 cut(s) 65
XhoI CTCGAG 1 cut(s) 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.