Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

2902215 .. 2904824

Gene Structure 2610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G040500.1_v2.0.a1.CDS.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGAGTGATGCTGCTGCTGATGAGGCTGCAAGCATCTCTAATACAGAAGATGAGACGGGGCGTACCTCTCAACATAGTTCTAATCAAAGTCGTGATGGCCAAGATTCACATCTGGGGGATGTTGCTGCAGATGAGACTACAAGCACCTCTAATAATTCGGGAGTTGGGACAAGGCCCACCTGTCGTCATCCTCCTAATATAAGTTATGACCGCCAACGCCAACAACATCCTCCAGCTGCTCCAGAAGTTTACGATAATGCATTTAAGTATGAAGCCCATGAATTTTCACTTACAGAGACAAGCCCTAAACTTGGAGGTGGAAGAGTTGCTAGTGGCCGTGTTATTCATGGAGAGAAGACTGCAAGCGCCTATGATCTAGTTGAACAGATGTATTTTTTGTATGTAAGGGTTGTTAAGGCTCGTGATCTTCCTGCCATGGATGTTACAGGAAGGCTTGCTCCATATACTGAGGTACGAGTTGGTGACTATAAATGGTTTACTAACTACTATGAAAAGGAACAAAATCCAGTATGGAATGAGGTTTTTGCCTTTTCAGGGGATCGGCTAAAATCATCTGTCTTAGAAGTCTTGGTTAGGGACAATGATGCGGATAGGGATGATCATGAATTTGTGGGGATTGTAAAATTTGACATCTCTGACGTTCCATTGCGAGTCCCTCCAGAATCTGATAATCCTCTTGCTCCACAATGGTATCGGATTGAAGACAATACAGGGCATAAAGCTAGCGGTGAGCTAATGCTCGCAGTCTGGTTTGGCACCCAAGCAGATGAGGCTTTCCCCGGTGCATGGCATTCTGATAATGCAAGCAGTCATGTTGATATCAGACTACTTACCTCCACAGTGCTAGGCTCAAAGGTCTATCATGCACCAAGGTTGTGGTATTTACGTGTTAATGTTATCGAGGCACACAACCTTAGAAGACAAGAATCGTTTCCCATATGCTTATGTCCAGGAAACCAGGATTCGGTAACACAAAAAATTCAGGCGCAAAATCTAAACCCCCTTTGGAATGAAGATCTTTTTCTTGTCGCTGCTGAACCCTTTGAAGATCATCTAATCATTTCTGTTTACGATCATGTGTCTCCTACAAAAGATGAAATCATTGGGAGGGTCCCAATAGCGCTGCAATCTGTCGATAGGCGTGCTGATGATAGTATGATCCGTGGCCGATGGTATAAACTGGAAAAGCCAGTGGCTGTGGATCAAAACGAGTCGGAAAGAGAAAAATTATCATCCAGCATCCATCTCCGACTTTGTCTAGAGGGAGGATACCATGTCGCCAATGAATCACCTCATTATAACAGTGATTTACGACCCACATCAAAGAAGCTATGGAGGCCATCAATTGGGGTTTTAGAGCTCGGAATCTTGGATGCTGTAGAGCTTCATCCAATGAAAACACGTGTATTTGACAACAACCTACAGTTTGGGAATGGCTCCAGACACGCGATGATTGGGAAGGTTCGAATTCGTATCTCATCACTGGAAGCAGGCCGTGTGTATACACACACCGATATCCACTGCTGGCTGTTCATCGGTGTTAAGAAGATGGGGGAGTTGCATTTGGCAGTTCGATTTTCTTGCACCTCTTTTGTTAAAACGCTTTACTCCTACTCACAGCCGCAGATGCCCAAGATGCACTACTTAAGGCCCATCACGGCGGCGCAGCTTGACAAGTTAAGGATGATTGCTCTTTACCTAGTCAAAGCACAGTTTTCTCGAGCTGATCCTCCACTGACAAGGGAAGTGGTGGAATACATGTGCGATGGGAACTGCCATCTGTGGAGCATACGACGGAGTAGAGCAAATTTCTTTAGGCTAGCGACAGCTTTGTCCGGAGTCATTTCTGCAGGCAAATGGTTTTGGGAAATTTGCATGTGGAAGAATCCCATAATGACAGTTCTTGCCCATGTTTTCTTCCTCATGCTCGTTTGCTTCCCGCAACTAATTCTGCCCACGGCTTTTCTTTGCATGGTTCTATCTGGGTTATGGAACTTCCACTTCCGGGCTAGGTGTCCTCCCCACATTAACATAAAGCTCTCACAACTTGAACTCGTGAACCTTGATGAGCTGGATGAGGAATTCGACACGTATCCAACGAGCCAGAATATGGAGCGGGTGGGAAAGAGGTATGATCGGCTGAGGAGCAATGCTAGTAGCGTTCAGGCTCTAGTGGGTGATATGGCTAGTCTCGCGGAGCGATTTCAGTTGCTGTTAAGCTGGCGAGACCCGCGTGCCACAGTCCTCTTCGTAACATTTTGCATTGCAGTTACCTTTGTGTTGTATGTGACACCATTCACGGCGGTGGCTGCATTAGCAGGGTTGATTGTCATGATGCCTCCCGGATTTCGCCATATGTTGCCGACAGCAGCATTTTTCAACTTCTTCAGCAGGCTGCCTACTAAGACTGATACTATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005789 GO:0007154 GO:0007165 GO:0008021 GO:0008150 GO:0009987 GO:0010646 GO:0012505 GO:0012506 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023051 GO:0023052 GO:0030100 GO:0030133 GO:0030334 GO:0030336 GO:0030658 GO:0030659 GO:0030672 GO:0031090 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032879 GO:0035556 GO:0040012 GO:0040013 GO:0042175 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044456 GO:0044464 GO:0045202 GO:0045806 GO:0046872 GO:0046928 GO:0048167 GO:0048168 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050804 GO:0050896 GO:0051046 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051270 GO:0051271 GO:0051588 GO:0051716 GO:0055037 GO:0060341 GO:0060627 GO:0065007 GO:0065008 GO:0070382 GO:0080134 GO:0097458 GO:0097708 GO:0098588 GO:0098793 GO:0098805 GO:0098827 GO:0099177 GO:0099501 GO:0099503 GO:1902882 GO:1902883 GO:1903530 GO:2000145 GO:2000146

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

815

Amino Acids

92.36

Weight (kDa)

6.41

Isoelectric Point (pI)

47.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1320
AasI	GACNNNNNNGTC	1 cut(s)	1852
AccB1I	GGYRCC	1 cut(s)	776
AccB7I	CCANNNNNTGG	2 cut(s)	1367, 2131
AccBSI	CCGCTC	1 cut(s)	2137
AccI	GTMKAC	1 cut(s)	1523
AccII	CGCG	3 cut(s)	1469, 2216, 2254
AccIII	TCCGGA	1 cut(s)	1856
AclWI	GGATC	4 cut(s)	567, 1174, 1230, 1742
AcoI	YGGCCR	3 cut(s)	97, 334, 1186
AcsI	RAATTY	8 cut(s)	281, 626, 644, 999, 1488, 1828, 1890, 2102
AcuI	CTGAAG	1 cut(s)	2392
AcvI	CACGTG	1 cut(s)	1424
AfaI	GTAC	2 cut(s)	64, 474
AfeI	AGCGCT	1 cut(s)	1143
AfiI	CCNNNNNNNGG	7 cut(s)	311, 555, 807, 985, 1367, 2026, 2131
AflII	CTTAAG	1 cut(s)	1666
AflIII	ACRYGT	5 cut(s)	907, 1421, 1423, 1779, 2109
AgsI	TTSAA	5 cut(s)	383, 722, 1067, 2072, 2401
AjnI	CCWGG	2 cut(s)	970, 978
AleI	CACNNNNGTG	1 cut(s)	2324
Alw21I	GWGCWC	1 cut(s)	1383
Alw26I	GTCTC	6 cut(s)	47, 128, 290, 1107, 2216, 2241
AlwI	GGATC	4 cut(s)	567, 1174, 1230, 1742
AlwNI	CAGNNNCTG	3 cut(s)	686, 1217, 2233
Ama87I	CYCGRG	1 cut(s)	1740
Aor13HI	TCCGGA	1 cut(s)	1856
Aor51HI	AGCGCT	1 cut(s)	1143
AoxI	GGCC	7 cut(s)	97, 173, 334, 1186, 1358, 1513, 1670
ApoI	RAATTY	8 cut(s)	281, 626, 644, 999, 1488, 1828, 1890, 2102
Asp700I	GAANNNNTTC	1 cut(s)	951
AspLEI	GCGC	4 cut(s)	368, 1009, 1144, 1687
AspS9I	GGNCC	3 cut(s)	174, 1132, 1671
AsuC2I	CCSGG	3 cut(s)	801, 2027, 2364
AsuHPI	GGTGA	4 cut(s)	494, 761, 1302, 2210
AsuII	TTCGAA	1 cut(s)	1486
AsuNHI	GCTAGC	2 cut(s)	743, 1840
AvaI	CYCGRG	1 cut(s)	1740
AvaII	GGWCC	1 cut(s)	1132
BaeI	ACNNNNGTAYC	2 cut(s)	695, 728
BalI	TGGCCA	1 cut(s)	99
BanI	GGYRCC	1 cut(s)	776
BanII	GRGCYC	1 cut(s)	1383
BauI	CACGAG	2 cut(s)	420, 2075
BbrPI	CACGTG	1 cut(s)	1424
BbsI	GAAGAC	3 cut(s)	362, 729, 946
Bbv12I	GWGCWC	1 cut(s)	1383
BbvCI	CCTCAGC	1 cut(s)	2162
BbvI	GCAGC	9 cut(s)	13, 112, 223, 1039, 1131, 1699, 2317, 2402, 2403
BccI	CCATC	8 cut(s)	89, 1185, 1272, 1369, 1564, 1682, 1781, 1806
BceAI	ACGGC	5 cut(s)	321, 1500, 1695, 1995, 2337
BcgI	CGANNNNNNTGC	4 cut(s)	1145, 1179, 1584, 1618
BciT130I	CCWGG	2 cut(s)	972, 980
BciVI	GTATCC	2 cut(s)	1283, 2124
BclI	TGATCA	1 cut(s)	619
BcnI	CCSGG	3 cut(s)	801, 2027, 2364
BcoDI	GTCTC	6 cut(s)	47, 128, 290, 1107, 2216, 2241
BfmI	CTRYAG	4 cut(s)	126, 1398, 1442, 1869
BfoI	RGCGCY	2 cut(s)	369, 1145
BfrI	CTTAAG	1 cut(s)	1666
BfuI	GTATCC	2 cut(s)	1283, 2124
BglII	AGATCT	1 cut(s)	1036
Bme1390I	CCNGG	5 cut(s)	801, 972, 980, 2027, 2364
Bme18I	GGWCC	1 cut(s)	1132
BmeT110I	CYCGRG	1 cut(s)	1740
BmgT120I	GGNCC	3 cut(s)	174, 1132, 1671
BmiI	GGNNCC	4 cut(s)	778, 1133, 1134, 1459
BmrFI	CCNGG	5 cut(s)	801, 972, 980, 2027, 2364
BmsI	GCATC	7 cut(s)	42, 595, 1269, 1384, 1638, 1647, 2346
BmtI	GCTAGC	2 cut(s)	747, 1844
BpiI	GAAGAC	3 cut(s)	362, 729, 946
BpmI	CTGGAG	4 cut(s)	216, 225, 663, 1444
Bpu10I	CCTNAGC	1 cut(s)	2162
Bpu14I	TTCGAA	1 cut(s)	1486
BpuMI	CCSGG	3 cut(s)	801, 2027, 2364
BsaAI	YACGTR	3 cut(s)	908, 1424, 2112
BsaBI	GATNNNNATC	1 cut(s)	108
BsaI	GGTCTC	1 cut(s)	2241
BsaJI	CCNNGG	5 cut(s)	435, 799, 890, 1183, 1977
BsaWI	WCCGGW	1 cut(s)	1856
Bsc4I	CCNNNNNNNGG	7 cut(s)	311, 555, 807, 985, 1367, 2026, 2131
Bse1I	ACTGG	4 cut(s)	527, 1206, 1211, 1509
Bse3DI	GCAATG	3 cut(s)	665, 2176, 2283
Bse8I	GATNNNNATC	1 cut(s)	108
BseAI	TCCGGA	1 cut(s)	1856
BseBI	CCWGG	2 cut(s)	972, 980
BseDI	CCNNGG	5 cut(s)	435, 799, 890, 1183, 1977
BseJI	GATNNNNATC	1 cut(s)	108
BseLI	CCNNNNNNNGG	7 cut(s)	311, 555, 807, 985, 1367, 2026, 2131
BseMI	GCAATG	3 cut(s)	665, 2176, 2283
BseMII	CTCAG	2 cut(s)	459, 2153
BseNI	ACTGG	4 cut(s)	527, 1206, 1211, 1509
BseRI	GAGGAG	1 cut(s)	2179
BseXI	GCAGC	9 cut(s)	13, 112, 223, 1039, 1131, 1699, 2317, 2402, 2403
Bsh1236I	CGCG	3 cut(s)	1469, 2216, 2254
BshFI	GGCC	7 cut(s)	99, 175, 336, 1188, 1360, 1515, 1672
BshNI	GGYRCC	1 cut(s)	776
BsiHKAI	GWGCWC	1 cut(s)	1383
BsiHKCI	CYCGRG	1 cut(s)	1740
BsiSI	CCGG	4 cut(s)	801, 1857, 2026, 2364
BslFI	GGGAC	4 cut(s)	181, 611, 659, 1118
BslI	CCNNNNNNNGG	7 cut(s)	311, 555, 807, 985, 1367, 2026, 2131
BsmAI	GTCTC	6 cut(s)	47, 128, 290, 1107, 2216, 2241
BsmBI	CGTCTC	1 cut(s)	47
BsmFI	GGGAC	4 cut(s)	181, 611, 659, 1118
BsmI	GAATGC	1 cut(s)	811
BsnI	GGCC	7 cut(s)	99, 175, 336, 1188, 1360, 1515, 1672
Bso31I	GGTCTC	1 cut(s)	2241
BsoBI	CYCGRG	1 cut(s)	1740
Bsp119I	TTCGAA	1 cut(s)	1486
Bsp1286I	GDGCHC	1 cut(s)	1383
Bsp13I	TCCGGA	1 cut(s)	1856
Bsp19I	CCATGG	1 cut(s)	435
BspANI	GGCC	7 cut(s)	99, 175, 336, 1188, 1360, 1515, 1672
BspCNI	CTCAG	2 cut(s)	460, 2154
BspEI	TCCGGA	1 cut(s)	1856
BspFNI	CGCG	3 cut(s)	1469, 2216, 2254
BspHI	TCATGA	2 cut(s)	622, 2352
BspLI	GGNNCC	4 cut(s)	778, 1133, 1134, 1459
BspMAI	CTGCAG	2 cut(s)	130, 1873
BspOI	GCTAGC	2 cut(s)	747, 1844
BspPI	GGATC	4 cut(s)	567, 1174, 1230, 1742
BspT104I	TTCGAA	1 cut(s)	1486
BspT107I	GGYRCC	1 cut(s)	776
BspTI	CTTAAG	1 cut(s)	1666
BspTNI	GGTCTC	1 cut(s)	2241
BsrBI	CCGCTC	1 cut(s)	2137
BsrDI	GCAATG	3 cut(s)	665, 2176, 2283
BsrI	ACTGG	4 cut(s)	527, 1206, 1211, 1509
BssECI	CCNNGG	5 cut(s)	435, 799, 890, 1183, 1977
BssNAI	GTATAC	1 cut(s)	1524
BssSI	CACGAG	2 cut(s)	420, 2075
BssT1I	CCWWGG	2 cut(s)	435, 890
Bst1107I	GTATAC	1 cut(s)	1524
Bst2BI	CACGAG	2 cut(s)	420, 2075
Bst2UI	CCWGG	2 cut(s)	972, 980
Bst4CI	ACNGT	6 cut(s)	862, 1325, 1446, 1734, 1921, 2263
Bst6I	CTCTTC	2 cut(s)	316, 2273
BstAFI	CTTAAG	1 cut(s)	1666
BstBAI	YACGTR	3 cut(s)	908, 1424, 2112
BstBI	TTCGAA	1 cut(s)	1486
BstDEI	CTNAG	5 cut(s)	468, 580, 935, 2162, 2424
BstDSI	CCRYGG	3 cut(s)	435, 1183, 1977
BstFNI	CGCG	3 cut(s)	1469, 2216, 2254
BstH2I	RGCGCY	2 cut(s)	369, 1145
BstHHI	GCGC	4 cut(s)	368, 1009, 1144, 1687
BstMAI	GTCTC	6 cut(s)	47, 128, 290, 1107, 2216, 2241
BstMWI	GCNNNNNNNGC	9 cut(s)	23, 791, 1357, 1648, 1657, 2213, 2251, 2330, 2336
BstNI	CCWGG	2 cut(s)	972, 980
BstNSI	RCATGY	2 cut(s)	1783, 1900
BstSCI	CCNGG	5 cut(s)	799, 970, 978, 2025, 2362
BstSFI	CTRYAG	4 cut(s)	126, 1398, 1442, 1869
BstUI	CGCG	3 cut(s)	1469, 2216, 2254
BstV1I	GCAGC	9 cut(s)	13, 112, 223, 1039, 1131, 1699, 2317, 2402, 2403
BstV2I	GAAGAC	3 cut(s)	362, 729, 946
BstX2I	RGATCY	1 cut(s)	1036
BstXI	CCANNNNNNTGG	1 cut(s)	897
BstYI	RGATCY	1 cut(s)	1036
BstZ17I	GTATAC	1 cut(s)	1524
BsuI	GTATCC	2 cut(s)	1283, 2124
BsuRI	GGCC	7 cut(s)	99, 175, 336, 1188, 1360, 1515, 1672
BtgI	CCRYGG	3 cut(s)	435, 1183, 1977
BtgZI	GCGATG	2 cut(s)	1484, 1800
BtsI	GCAGTG	1 cut(s)	1540
BtsIMutI	CAGTG	6 cut(s)	867, 1218, 1330, 1502, 1540, 1754
CaiI	CAGNNNCTG	3 cut(s)	686, 1217, 2233
CciI	TCATGA	2 cut(s)	622, 2352
CfoI	GCGC	4 cut(s)	368, 1009, 1144, 1687
Cfr13I	GGNCC	3 cut(s)	174, 1132, 1671
Csp6I	GTAC	2 cut(s)	63, 473
CspCI	CAANNNNNGTGG	2 cut(s)	1749, 1784
CviQI	GTAC	2 cut(s)	63, 473
DdeI	CTNAG	5 cut(s)	468, 580, 935, 2162, 2424
DrdI	GACNNNNNNGTC	1 cut(s)	1852
DseDI	GACNNNNNNGTC	1 cut(s)	1852
EaeI	YGGCCR	3 cut(s)	97, 334, 1186
Eam1104I	CTCTTC	2 cut(s)	316, 2273
EarI	CTCTTC	2 cut(s)	316, 2273
Ecl136II	GAGCTC	1 cut(s)	1381
Eco130I	CCWWGG	2 cut(s)	435, 890
Eco24I	GRGCYC	1 cut(s)	1383
Eco31I	GGTCTC	1 cut(s)	2241
Eco32I	GATATC	2 cut(s)	841, 1537
Eco47I	GGWCC	1 cut(s)	1132
Eco47III	AGCGCT	1 cut(s)	1143
Eco53kI	GAGCTC	1 cut(s)	1381
Eco57I	CTGAAG	1 cut(s)	2392
Eco72I	CACGTG	1 cut(s)	1424
Eco88I	CYCGRG	1 cut(s)	1740
EcoICRI	GAGCTC	1 cut(s)	1381
EcoO109I	RGGNCCY	1 cut(s)	1132
EcoRI	GAATTC	2 cut(s)	1488, 2102
EcoRII	CCWGG	2 cut(s)	970, 978
EcoRV	GATATC	2 cut(s)	841, 1537
EcoT14I	CCWWGG	2 cut(s)	435, 890
EcoT22I	ATGCAT	1 cut(s)	262
EcoT38I	GRGCYC	1 cut(s)	1383
ErhI	CCWWGG	2 cut(s)	435, 890
Esp3I	CGTCTC	1 cut(s)	47
FaqI	GGGAC	4 cut(s)	181, 611, 659, 1118
FauI	CCCGC	3 cut(s)	1968, 2130, 2259
FauNDI	CATATG	2 cut(s)	959, 2376
FbaI	TGATCA	1 cut(s)	619
FblI	GTMKAC	1 cut(s)	1523
FriOI	GRGCYC	1 cut(s)	1383
GlaI	GCGC	4 cut(s)	367, 1008, 1143, 1686
GsuI	CTGGAG	4 cut(s)	216, 225, 663, 1444
HaeII	RGCGCY	2 cut(s)	369, 1145
HaeIII	GGCC	7 cut(s)	99, 175, 336, 1188, 1360, 1515, 1672
HapII	CCGG	4 cut(s)	801, 1857, 2026, 2364
HhaI	GCGC	4 cut(s)	368, 1009, 1144, 1687
Hin6I	GCGC	4 cut(s)	366, 1007, 1142, 1685
HinP1I	GCGC	4 cut(s)	366, 1007, 1142, 1685
HpaII	CCGG	4 cut(s)	801, 1857, 2026, 2364
HphI	GGTGA	4 cut(s)	494, 761, 1302, 2210
Hpy166II	GTNNAC	5 cut(s)	250, 498, 1090, 1524, 2080
Hpy188I	TCNGA	8 cut(s)	658, 688, 717, 817, 845, 1237, 1271, 1385
Hpy8I	GTNNAC	5 cut(s)	250, 498, 1090, 1524, 2080
Hpy99I	CGWCG	1 cut(s)	1818
HpyAV	CCTTC	2 cut(s)	444, 1474
HpyCH4III	ACNGT	6 cut(s)	862, 1325, 1446, 1734, 1921, 2263
HpyCH4IV	ACGT	4 cut(s)	660, 907, 1423, 2111
HpyF10VI	GCNNNNNNNGC	9 cut(s)	23, 791, 1357, 1648, 1657, 2213, 2251, 2330, 2336
HpyF3I	CTNAG	5 cut(s)	468, 580, 935, 2162, 2424
HpySE526I	ACGT	4 cut(s)	660, 907, 1423, 2111
HspAI	GCGC	4 cut(s)	366, 1007, 1142, 1685
KflI	GGGWCCC	1 cut(s)	1132
Kpn2I	TCCGGA	1 cut(s)	1856
Ksp22I	TGATCA	1 cut(s)	619
LmnI	GCTCC	8 cut(s)	244, 463, 706, 1463, 1806, 2134, 2166, 2218
Lsp1109I	GCAGC	9 cut(s)	13, 112, 223, 1039, 1131, 1699, 2317, 2402, 2403
LweI	GCATC	7 cut(s)	42, 595, 1269, 1384, 1638, 1647, 2346
MaeII	ACGT	4 cut(s)	660, 907, 1423, 2111
MaeIII	GTNAC	6 cut(s)	442, 482, 988, 2272, 2290, 2308
MbiI	CCGCTC	1 cut(s)	2137
MfeI	CAATTG	1 cut(s)	1365
MflI	RGATCY	1 cut(s)	1036
MhlI	GDGCHC	1 cut(s)	1383
MlsI	TGGCCA	1 cut(s)	99
MluNI	TGGCCA	1 cut(s)	99
MlyI	GAGTC	3 cut(s)	681, 1241, 1869
MmeI	TCCRAC	3 cut(s)	1215, 1294, 2141
Mox20I	TGGCCA	1 cut(s)	99
Mph1103I	ATGCAT	1 cut(s)	262
MroI	TCCGGA	1 cut(s)	1856
MroXI	GAANNNNTTC	1 cut(s)	951
MscI	TGGCCA	1 cut(s)	99
MseI	TTAA	9 cut(s)	264, 414, 912, 1563, 1617, 1667, 1700, 2049, 2237
MslI	CAYNNNNRTG	1 cut(s)	2324
Msp20I	TGGCCA	1 cut(s)	99
MspA1I	CMGCKG	1 cut(s)	236
MspCI	CTTAAG	1 cut(s)	1666
MspI	CCGG	4 cut(s)	801, 1857, 2026, 2364
MspR9I	CCNGG	5 cut(s)	801, 972, 980, 2027, 2364
MunI	CAATTG	1 cut(s)	1365
Mva1269I	GAATGC	1 cut(s)	811
MvaI	CCWGG	2 cut(s)	972, 980
MvnI	CGCG	3 cut(s)	1469, 2216, 2254
MwoI	GCNNNNNNNGC	9 cut(s)	23, 791, 1357, 1648, 1657, 2213, 2251, 2330, 2336
NciI	CCSGG	3 cut(s)	801, 2027, 2364
NcoI	CCATGG	1 cut(s)	435
NdeI	CATATG	2 cut(s)	959, 2376
NheI	GCTAGC	2 cut(s)	743, 1840
NlaIV	GGNNCC	4 cut(s)	778, 1133, 1134, 1459
NmuCI	GTSAC	2 cut(s)	482, 2308
NsiI	ATGCAT	1 cut(s)	262
NspI	RCATGY	2 cut(s)	1783, 1900
NspV	TTCGAA	1 cut(s)	1486
OliI	CACNNNNGTG	1 cut(s)	2324
PaeR7I	CTCGAG	1 cut(s)	1740
PagI	TCATGA	2 cut(s)	622, 2352
PciI	ACATGT	1 cut(s)	1779
PcsI	WCGNNNNNNNCGW	1 cut(s)	2117
PctI	GAATGC	1 cut(s)	811
PdmI	GAANNNNTTC	1 cut(s)	951
PfeI	GAWTC	7 cut(s)	104, 683, 947, 983, 1307, 1386, 1906
PflFI	GACNNNGTC	1 cut(s)	1275
PflMI	CCANNNNNTGG	2 cut(s)	1367, 2131
PfoI	TCCNGGA	2 cut(s)	970, 2362
PleI	GAGTC	3 cut(s)	680, 1240, 1868
PmaCI	CACGTG	1 cut(s)	1424
PmlI	CACGTG	1 cut(s)	1424
PpsI	GAGTC	3 cut(s)	680, 1240, 1868
Ppu21I	YACGTR	3 cut(s)	908, 1424, 2112
PpuMI	RGGWCCY	1 cut(s)	1132
PscI	ACATGT	1 cut(s)	1779
PsiI	TTATAA	1 cut(s)	1320
Psp124BI	GAGCTC	1 cut(s)	1383
Psp5II	RGGWCCY	1 cut(s)	1132
Psp6I	CCWGG	2 cut(s)	970, 978
PspCI	CACGTG	1 cut(s)	1424
PspGI	CCWGG	2 cut(s)	970, 978
PspN4I	GGNNCC	4 cut(s)	778, 1133, 1134, 1459
PspPI	GGNCC	3 cut(s)	174, 1132, 1671
PspPPI	RGGWCCY	1 cut(s)	1132
PstI	CTGCAG	2 cut(s)	130, 1873
PstNI	CAGNNNCTG	3 cut(s)	686, 1217, 2233
PsuI	RGATCY	1 cut(s)	1036
PsyI	GACNNNGTC	1 cut(s)	1275
PvuII	CAGCTG	1 cut(s)	236
RsaI	GTAC	2 cut(s)	64, 474
RsaNI	GTAC	2 cut(s)	63, 473
RseI	CAYNNNNRTG	1 cut(s)	2324
SacI	GAGCTC	1 cut(s)	1383
SaqAI	TTAA	9 cut(s)	264, 414, 912, 1563, 1617, 1667, 1700, 2049, 2237
Sau96I	GGNCC	3 cut(s)	174, 1132, 1671
SchI	GAGTC	3 cut(s)	681, 1241, 1869
ScrFI	CCNGG	5 cut(s)	801, 972, 980, 2027, 2364
SduI	GDGCHC	1 cut(s)	1383
SfaNI	GCATC	7 cut(s)	42, 595, 1269, 1384, 1638, 1647, 2346
SfcI	CTRYAG	4 cut(s)	126, 1398, 1442, 1869
Sfr274I	CTCGAG	1 cut(s)	1740
SfuI	TTCGAA	1 cut(s)	1486
SinI	GGWCC	1 cut(s)	1132
SlaI	CTCGAG	1 cut(s)	1740
SmiMI	CAYNNNNRTG	1 cut(s)	2324
SmlI	CTYRAG	2 cut(s)	1666, 1740
SmoI	CTYRAG	2 cut(s)	1666, 1740
SstI	GAGCTC	1 cut(s)	1383
StyD4I	CCNGG	5 cut(s)	799, 970, 978, 2025, 2362
StyI	CCWWGG	2 cut(s)	435, 890
TaaI	ACNGT	6 cut(s)	862, 1325, 1446, 1734, 1921, 2263
TaiI	ACGT	4 cut(s)	663, 910, 1426, 2114
TaqI	TCGA	6 cut(s)	921, 1155, 1486, 1594, 1741, 2106
TauI	GCSGC	2 cut(s)	1645, 1685
TfiI	GAWTC	7 cut(s)	104, 683, 947, 983, 1307, 1386, 1906
Tru1I	TTAA	9 cut(s)	264, 414, 912, 1563, 1617, 1667, 1700, 2049, 2237
Tru9I	TTAA	9 cut(s)	264, 414, 912, 1563, 1617, 1667, 1700, 2049, 2237
TscAI	CASTG	6 cut(s)	867, 1218, 1330, 1509, 1547, 1761
TseFI	GTSAC	2 cut(s)	482, 2308
Tsp45I	GTSAC	2 cut(s)	482, 2308
TspGWI	ACGGA	2 cut(s)	1172, 1831
TspRI	CASTG	6 cut(s)	867, 1218, 1330, 1509, 1547, 1761
Tth111I	GACNNNGTC	1 cut(s)	1275
Van91I	CCANNNNNTGG	2 cut(s)	1367, 2131
Vha464I	CTTAAG	1 cut(s)	1666
VpaK11BI	GGWCC	1 cut(s)	1132
XapI	RAATTY	8 cut(s)	281, 626, 644, 999, 1488, 1828, 1890, 2102
XbaI	TCTAGA	1 cut(s)	1279
XceI	RCATGY	2 cut(s)	1783, 1900
XhoI	CTCGAG	1 cut(s)	1740
XmiI	GTMKAC	1 cut(s)	1523
XmnI	GAANNNNTTC	1 cut(s)	951
Zsp2I	ATGCAT	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.