Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0016953

Physical Location & Seq

Genomic Coordinates Reverse (-)

3500810 .. 3508634

Gene Structure 7825 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G049700.10_v2.0.a1.CDS.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGCCAAAGGAGGCAGAGCCCCCCTCATACTCGACCTTGGCAACAAGCTTGAGCCAAACGGCATTTTCTTCTCCGGTGAGCGGTGATGGCTGCTGCTCTACTCTGCTCGTTGGTGGTGACAGAGAGTTCAATGTCAATGGATTTGAAAATTTTACAAAATTCACAGGGTTTGCTGAAGTCGGACTTTCTTATCTTGTTGTGGCCATTATCGGCCCACAAAGTAGTGGAAAGAGCACACTACTAAACCATTTATTTCACACCAACTTTAAAGAGATGGACGCTTTTAGAGGAAGGTCTCAAACAACAAAAGGTATTTGGGTGGCAAAATGTCCCACCATTCACCCTTTTACTCTTGTTATGGACATGGAGGGTACAGATGGGAAAGAACGAGGAGAGGATACAGCTTTCGAGAAGCAGACTACTCTTTTTGCCCTTGCTGTAGCAGATGTAGTGCTCATTAACATATGGTGCCATGACATTGGCCGTGAGCACGCTTCAAATAAGCCTCTCCTAAACACTGTGTTCCAGGTGATGATGCGATTGTTTGGTCCTCGTAAGACAACGCTGATCTTTGTCATCCGTGATAAGACAAAGACGCCACTGGAGAATTTAGAAAGCGAACTTCGGAACGACATTCAGAAGATATGGGCGTCTGCTCCTAAGCCTGAAGCCCACAAGGAAACTCCACTGAGTGAATTTTTCAATGTTGAGGTTGTTGCGCTTTCAAATTATGAAGAAAAAGAAGACGCATTTAAAGCGGAGGTTGCTGGCATGAGGCAGAAATTCATCCATAATGAACTTGCTGGAGATCGACAGGCGGTAGTTCCTGCTTCAGGATTTTCTTTGAGTTTACAGGAAATTTGGGAAAAAATTAAAAAAAACAGAGATCTTGATATTCCTTCCATCAAGGTCTTGGTGGCTACAGTACGTTGTGAAGAGATTGCCAATGAGAAGTATTCTGCTTTTGCAGCAAATGAGGAGTTGAAAGTGATCTCAGTTCATCCTGGCTTTGGAAAGAAGCTGAGTTCAATGATTTATACTTGCATATCGGGGTATGATGAAGAGGCTACATATTATGATGAAGGTGTCAAATCGGTGAAGCGCAAGCAGCTTGAAGAAAAATTGCTGCAATTTGTTCAACCTAAATTCCAAGATCTGCTGGAACTTAAAAGATCTTTTACTCTGGATAAGTTCAAGGAAGCATTTGATAAGGACTTGGACGGGGTCATCAAGGGATTTTCTGTGACCGCTCGTAATTCCACCGAGTCTTTTATGGCTCAATTTGACGAAGGCTGTGCAGATGCTGTTATCAAACAAGCAAACTGGGACACATCTAAAGTAAGGGATAAACTTAGACGTGATATAGAAGCCCATGTTGCTTCAGTTCATGCTGACAAGATAAAGAACCATTGTGAGGCAAAGTTGAGGGAGCTGTTATCAGGACCGGTGGAAGCCCTTTTGAAGCAAGCTAATAATATGACCTGGCCCACAATAAGAAGACGTCTTCGAGAGGCTGAATCAGCTTTCTCTGGGAGCGCTGCTGCAATTTCTGGTTTTGAAATGGATGAACAAACCAAAGCCAAAATAGATGCAAATCTAGAGAAATATGTAAGACGTATTGTTGAAGATAAAGCAAAGGAAGAGGCTCGAAGGGTCCTCAAGCACATGGAGGAGAGGTTTAAAACAAAATTTAGCTACGATTCTAATTCAATCCCACGTGTTTGGAACCGGAGAGAAAATATTGGAGCGATCGCCAGAACTGCTCATTCTTCATCCCTAGAAGTGCTTTCTGTTATGGCTGTGATCCGTTTGGATGGTGATGATGACGGTCATAAAATTCAGGCAACTTTAAACAGTGCCTTGCTGGATAAAGATATGAGTACCACAACAAATGACCTACTGGCTTCAAATACTTGGGAAGAGGTTCCATCATCAAAAACATTGATCATACCTCTTAAATGCAAAGAGTTGTGGGAGGAATTCAAGGAAAATACCAAGGACATTGTTTCGAAGGCCATAGCTGAACAGGCCAATGCGCCTCTTCAACTACCTCCTTGGGTAATTGGCTGTTTGATTTTCGTGGGATACAATGCCATTACGAGACTAATAAGAAATCCTTTGTATCTGGGTGTGGGTGTCATCCTTGTTGCTTTTTTACTCGTCACGCCCCTGTGGTGCTGGTTTGCCAGTCTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000902 GO:0001882 GO:0001883 GO:0003674 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005886 GO:0006810 GO:0006888 GO:0006996 GO:0007010 GO:0007275 GO:0008150 GO:0009653 GO:0009826 GO:0009832 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0017076 GO:0019001 GO:0022622 GO:0030029 GO:0030036 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032989 GO:0035639 GO:0036094 GO:0040007 GO:0042546 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048364 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060560 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:0099402 GO:1901265 GO:1901363 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RHD3

Protein Analysis

733

Amino Acids

82.29

Weight (kDa)

6.24

Isoelectric Point (pI)

34.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016953)

Species	Orthologous Gene IDs
prunus_persica	Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1 Prupe.3G049700_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1504
AccB1I	GGYRCC	1 cut(s)	468
AccB7I	CCANNNNNTGG	1 cut(s)	2193
AccBSI	CCGCTC	2 cut(s)	81, 1250
AciI	CCGC	4 cut(s)	81, 758, 818, 1248
AclWI	GGATC	1 cut(s)	1798
AcoI	YGGCCR	2 cut(s)	201, 481
AcuI	CTGAAG	4 cut(s)	195, 687, 816, 1365
AcvI	CACGTG	1 cut(s)	1718
AcyI	GRCGYC	3 cut(s)	596, 650, 1501
AdeI	CACNNNGTG	1 cut(s)	692
AfaI	GTAC	3 cut(s)	373, 927, 1882
AfeI	AGCGCT	1 cut(s)	1537
AfiI	CCNNNNNNNGG	5 cut(s)	80, 833, 1010, 1414, 2193
AflIII	ACRYGT	1 cut(s)	1717
AgeI	ACCGGT	1 cut(s)	1444
AjiI	CACGTC	1 cut(s)	1358
AjnI	CCWGG	3 cut(s)	525, 1003, 1481
AluBI	AGCT	9 cut(s)	48, 404, 1021, 1111, 1432, 1469, 1523, 1695, 2021
AluI	AGCT	9 cut(s)	48, 404, 1021, 1111, 1432, 1469, 1523, 1695, 2021
Alw21I	GWGCWC	3 cut(s)	236, 456, 492
Alw26I	GTCTC	3 cut(s)	300, 2095, 2195
AlwI	GGATC	1 cut(s)	1798
AlwNI	CAGNNNCTG	2 cut(s)	1304, 2193
Aor51HI	AGCGCT	1 cut(s)	1537
AoxI	GGCC	6 cut(s)	201, 211, 481, 1484, 2013, 2028
ApeKI	GCWGC	7 cut(s)	90, 93, 968, 1108, 1126, 1538, 1541
AsiGI	ACCGGT	1 cut(s)	1444
AsiSI	GCGATCGC	1 cut(s)	1752
Asp700I	GAANNNNTTC	1 cut(s)	1923
AspLEI	GCGC	4 cut(s)	721, 1104, 1538, 2038
AspS9I	GGNCC	5 cut(s)	212, 548, 1442, 1485, 1654
AsuHPI	GGTGA	7 cut(s)	88, 95, 128, 332, 541, 1108, 1829
AsuII	TTCGAA	1 cut(s)	2009
AvaII	GGWCC	3 cut(s)	548, 1442, 1654
BalI	TGGCCA	1 cut(s)	203
BanI	GGYRCC	1 cut(s)	468
BanII	GRGCYC	1 cut(s)	21
BbrPI	CACGTG	1 cut(s)	1718
BbsI	GAAGAC	3 cut(s)	750, 1496, 1504
Bbv12I	GWGCWC	3 cut(s)	236, 456, 492
BbvI	GCAGC	7 cut(s)	77, 80, 980, 1113, 1120, 1525, 1528
BccI	CCATC	6 cut(s)	80, 268, 371, 911, 1808, 1936
BceAI	ACGGC	2 cut(s)	75, 468
BcgI	CGANNNNNNTGC	2 cut(s)	1277, 1311
BciT130I	CCWGG	3 cut(s)	527, 1005, 1483
BciVI	GTATCC	2 cut(s)	391, 2078
BclI	TGATCA	1 cut(s)	1944
BcoDI	GTCTC	3 cut(s)	300, 2095, 2195
BfaI	CTAG	2 cut(s)	1598, 1778
BfmI	CTRYAG	2 cut(s)	438, 921
BfoI	RGCGCY	1 cut(s)	1539
BfuI	GTATCC	2 cut(s)	391, 2078
BglII	AGATCT	3 cut(s)	886, 1153, 1172
BisI	GCNGC	7 cut(s)	91, 94, 969, 1109, 1127, 1539, 1542
BlsI	GCNGC	7 cut(s)	92, 95, 970, 1110, 1128, 1540, 1543
Bme1390I	CCNGG	3 cut(s)	527, 1005, 1483
Bme18I	GGWCC	3 cut(s)	548, 1442, 1654
BmgBI	CACGTC	1 cut(s)	1358
BmgT120I	GGNCC	5 cut(s)	212, 548, 1442, 1485, 1654
BmiI	GGNNCC	4 cut(s)	470, 1655, 1727, 1926
BmrFI	CCNGG	3 cut(s)	527, 1005, 1483
BmrI	ACTGGG	1 cut(s)	1333
BmsI	GCATC	3 cut(s)	525, 1291, 1579
BmuI	ACTGGG	1 cut(s)	1333
BpiI	GAAGAC	3 cut(s)	750, 1496, 1504
BplI	GAGNNNNNCTC	2 cut(s)	8, 40
BpmI	CTGGAG	2 cut(s)	623, 825
Bpu10I	CCTNAGC	1 cut(s)	660
Bpu14I	TTCGAA	1 cut(s)	2009
BpuEI	CTTGAG	2 cut(s)	70, 1643
BsaAI	YACGTR	1 cut(s)	1718
BsaBI	GATNNNNATC	1 cut(s)	1593
BsaHI	GRCGYC	3 cut(s)	596, 650, 1501
BsaI	GGTCTC	1 cut(s)	300
BsaJI	CCNNGG	3 cut(s)	36, 1995, 2054
BsaWI	WCCGGW	3 cut(s)	73, 1444, 1728
BsaXI	ACNNNNNCTCC	2 cut(s)	1661, 1691
Bsc4I	CCNNNNNNNGG	5 cut(s)	80, 833, 1010, 1414, 2193
Bse118I	RCCGGY	1 cut(s)	1444
Bse1I	ACTGG	4 cut(s)	606, 1328, 1905, 2187
Bse8I	GATNNNNATC	1 cut(s)	1593
BseBI	CCWGG	3 cut(s)	527, 1005, 1483
BseDI	CCNNGG	3 cut(s)	36, 1995, 2054
BseGI	GGATG	7 cut(s)	576, 786, 1000, 1570, 1772, 1819, 2139
BseJI	GATNNNNATC	1 cut(s)	1593
BseLI	CCNNNNNNNGG	5 cut(s)	80, 833, 1010, 1414, 2193
BseMII	CTCAG	3 cut(s)	680, 1008, 1013
BseNI	ACTGG	4 cut(s)	606, 1328, 1905, 2187
BseRI	GAGGAG	3 cut(s)	405, 992, 1685
BseXI	GCAGC	7 cut(s)	77, 80, 980, 1113, 1120, 1525, 1528
BsgI	GTGCAG	1 cut(s)	1317
Bsh1285I	CGRYCG	1 cut(s)	1752
BshFI	GGCC	6 cut(s)	203, 213, 483, 1486, 2015, 2030
BshNI	GGYRCC	1 cut(s)	468
BshTI	ACCGGT	1 cut(s)	1444
BsiEI	CGRYCG	1 cut(s)	1752
BsiHKAI	GWGCWC	3 cut(s)	236, 456, 492
BsiSI	CCGG	3 cut(s)	74, 1445, 1729
BslFI	GGGAC	2 cut(s)	315, 1340
BslI	CCNNNNNNNGG	5 cut(s)	80, 833, 1010, 1414, 2193
BsmAI	GTCTC	3 cut(s)	300, 2095, 2195
BsmFI	GGGAC	2 cut(s)	315, 1340
BsnI	GGCC	6 cut(s)	203, 213, 483, 1486, 2015, 2030
Bso31I	GGTCTC	1 cut(s)	300
Bsp119I	TTCGAA	1 cut(s)	2009
Bsp1286I	GDGCHC	4 cut(s)	21, 236, 456, 492
Bsp143I	GATC	9 cut(s)	567, 808, 886, 990, 1153, 1172, 1749, 1803, 1944
BspACI	CCGC	4 cut(s)	81, 758, 818, 1248
BspANI	GGCC	6 cut(s)	203, 213, 483, 1486, 2015, 2030
BspCNI	CTCAG	3 cut(s)	681, 1007, 1014
BspLI	GGNNCC	4 cut(s)	470, 1655, 1727, 1926
BspPI	GGATC	1 cut(s)	1798
BspT104I	TTCGAA	1 cut(s)	2009
BspT107I	GGYRCC	1 cut(s)	468
BspTNI	GGTCTC	1 cut(s)	300
BsrBI	CCGCTC	2 cut(s)	81, 1250
BsrFI	RCCGGY	1 cut(s)	1444
BsrI	ACTGG	4 cut(s)	606, 1328, 1905, 2187
BssAI	RCCGGY	1 cut(s)	1444
BssECI	CCNNGG	3 cut(s)	36, 1995, 2054
BssMI	GATC	9 cut(s)	567, 808, 886, 990, 1153, 1172, 1749, 1803, 1944
BssNI	GRCGYC	3 cut(s)	596, 650, 1501
BssT1I	CCWWGG	3 cut(s)	36, 1995, 2054
Bst2UI	CCWGG	3 cut(s)	527, 1005, 1483
Bst4CI	ACNGT	4 cut(s)	520, 925, 1829, 1856
Bst6I	CTCTTC	5 cut(s)	930, 1056, 1635, 1914, 2046
BstACI	GRCGYC	3 cut(s)	596, 650, 1501
BstBAI	YACGTR	1 cut(s)	1718
BstBI	TTCGAA	1 cut(s)	2009
BstC8I	GCNNGC	4 cut(s)	492, 769, 1106, 1467
BstDEI	CTNAG	5 cut(s)	660, 689, 994, 1022, 1352
BstENI	CCTNNNNNAGG	1 cut(s)	831
BstF5I	GGATG	7 cut(s)	576, 786, 1000, 1570, 1772, 1819, 2139
BstH2I	RGCGCY	1 cut(s)	1539
BstHHI	GCGC	4 cut(s)	721, 1104, 1538, 2038
BstKTI	GATC	9 cut(s)	570, 811, 889, 993, 1156, 1175, 1752, 1806, 1947
BstMAI	GTCTC	3 cut(s)	300, 2095, 2195
BstMBI	GATC	9 cut(s)	567, 808, 886, 990, 1153, 1172, 1749, 1803, 1944
BstMCI	CGRYCG	1 cut(s)	1752
BstMWI	GCNNNNNNNGC	9 cut(s)	87, 755, 764, 968, 1108, 1376, 1520, 1760, 2027
BstNI	CCWGG	3 cut(s)	527, 1005, 1483
BstSCI	CCNGG	3 cut(s)	525, 1003, 1481
BstSFI	CTRYAG	2 cut(s)	438, 921
BstV1I	GCAGC	7 cut(s)	77, 80, 980, 1113, 1120, 1525, 1528
BstV2I	GAAGAC	3 cut(s)	750, 1496, 1504
BstX2I	RGATCY	3 cut(s)	886, 1153, 1172
BstXI	CCANNNNNNTGG	2 cut(s)	479, 1722
BstYI	RGATCY	3 cut(s)	886, 1153, 1172
BsuI	GTATCC	2 cut(s)	391, 2078
BsuRI	GGCC	6 cut(s)	203, 213, 483, 1486, 2015, 2030
BtrI	CACGTC	1 cut(s)	1358
BtsCI	GGATG	7 cut(s)	576, 786, 1000, 1570, 1772, 1819, 2139
BtsIMutI	CAGTG	4 cut(s)	516, 599, 686, 1861
Cac8I	GCNNGC	4 cut(s)	492, 769, 1106, 1467
CaiI	CAGNNNCTG	2 cut(s)	1304, 2193
CfoI	GCGC	4 cut(s)	721, 1104, 1538, 2038
Cfr10I	RCCGGY	1 cut(s)	1444
Cfr13I	GGNCC	5 cut(s)	212, 548, 1442, 1485, 1654
CseI	GACGC	4 cut(s)	287, 604, 639, 755
Csp6I	GTAC	3 cut(s)	372, 926, 1881
CspAI	ACCGGT	1 cut(s)	1444
CviAII	CATG	6 cut(s)	364, 473, 772, 1373, 1388, 1666
CviQI	GTAC	3 cut(s)	372, 926, 1881
DdeI	CTNAG	5 cut(s)	660, 689, 994, 1022, 1352
DpnI	GATC	9 cut(s)	569, 810, 888, 992, 1155, 1174, 1751, 1805, 1946
DpnII	GATC	9 cut(s)	567, 808, 886, 990, 1153, 1172, 1749, 1803, 1944
DraI	TTTAAA	4 cut(s)	268, 754, 1681, 1851
DraIII	CACNNNGTG	1 cut(s)	692
EaeI	YGGCCR	2 cut(s)	201, 481
Eam1104I	CTCTTC	5 cut(s)	930, 1056, 1635, 1914, 2046
EarI	CTCTTC	5 cut(s)	930, 1056, 1635, 1914, 2046
Eco130I	CCWWGG	3 cut(s)	36, 1995, 2054
Eco24I	GRGCYC	1 cut(s)	21
Eco31I	GGTCTC	1 cut(s)	300
Eco47I	GGWCC	3 cut(s)	548, 1442, 1654
Eco47III	AGCGCT	1 cut(s)	1537
Eco57I	CTGAAG	4 cut(s)	195, 687, 816, 1365
Eco72I	CACGTG	1 cut(s)	1718
EcoNI	CCTNNNNNAGG	1 cut(s)	831
EcoO109I	RGGNCCY	1 cut(s)	1654
EcoRI	GAATTC	1 cut(s)	1979
EcoRII	CCWGG	3 cut(s)	525, 1003, 1481
EcoT14I	CCWWGG	3 cut(s)	36, 1995, 2054
EcoT38I	GRGCYC	1 cut(s)	21
ErhI	CCWWGG	3 cut(s)	36, 1995, 2054
FaeI	CATG	6 cut(s)	367, 476, 775, 1376, 1391, 1669
FalI	AAGNNNNNCTT	4 cut(s)	168, 200, 2101, 2133
FaqI	GGGAC	2 cut(s)	315, 1340
FatI	CATG	6 cut(s)	363, 472, 771, 1372, 1387, 1665
FauNDI	CATATG	1 cut(s)	464
FbaI	TGATCA	1 cut(s)	1944
Fnu4HI	GCNGC	7 cut(s)	91, 94, 969, 1109, 1127, 1539, 1542
FokI	GGATG	7 cut(s)	563, 773, 987, 1577, 1759, 1826, 2126
FriOI	GRGCYC	1 cut(s)	21
Fsp4HI	GCNGC	7 cut(s)	91, 94, 969, 1109, 1127, 1539, 1542
FspBI	CTAG	2 cut(s)	1598, 1778
GlaI	GCGC	4 cut(s)	720, 1103, 1537, 2037
GluI	GCNGC	7 cut(s)	91, 94, 969, 1109, 1127, 1539, 1542
GsuI	CTGGAG	2 cut(s)	623, 825
HaeII	RGCGCY	1 cut(s)	1539
HaeIII	GGCC	6 cut(s)	203, 213, 483, 1486, 2015, 2030
HapII	CCGG	3 cut(s)	74, 1445, 1729
HgaI	GACGC	4 cut(s)	287, 604, 639, 755
HhaI	GCGC	4 cut(s)	721, 1104, 1538, 2038
Hin1I	GRCGYC	3 cut(s)	596, 650, 1501
Hin1II	CATG	6 cut(s)	367, 476, 775, 1376, 1391, 1669
Hin6I	GCGC	4 cut(s)	719, 1102, 1536, 2036
HinP1I	GCGC	4 cut(s)	719, 1102, 1536, 2036
HindIII	AAGCTT	1 cut(s)	46
HinfI	GANTC	3 cut(s)	1265, 1517, 1700
HpaII	CCGG	3 cut(s)	74, 1445, 1729
HphI	GGTGA	7 cut(s)	88, 95, 128, 332, 541, 1108, 1829
Hpy166II	GTNNAC	1 cut(s)	851
Hpy188I	TCNGA	3 cut(s)	182, 627, 639
Hpy188III	TCNNGA	7 cut(s)	409, 834, 890, 1184, 1440, 1508, 1598
Hpy8I	GTNNAC	1 cut(s)	851
HpyAV	CCTTC	6 cut(s)	285, 909, 1076, 1283, 1644, 2005
HpyCH4III	ACNGT	4 cut(s)	520, 925, 1829, 1856
HpyCH4IV	ACGT	5 cut(s)	928, 1357, 1501, 1615, 1717
HpyCH4V	TGCA	7 cut(s)	968, 1044, 1129, 1298, 1544, 1592, 1962
HpyF10VI	GCNNNNNNNGC	9 cut(s)	87, 755, 764, 968, 1108, 1376, 1520, 1760, 2027
HpyF3I	CTNAG	5 cut(s)	660, 689, 994, 1022, 1352
HpySE526I	ACGT	5 cut(s)	928, 1357, 1501, 1615, 1717
Hsp92I	GRCGYC	3 cut(s)	596, 650, 1501
Hsp92II	CATG	6 cut(s)	367, 476, 775, 1376, 1391, 1669
HspAI	GCGC	4 cut(s)	719, 1102, 1536, 2036
Ksp22I	TGATCA	1 cut(s)	1944
Kzo9I	GATC	9 cut(s)	567, 808, 886, 990, 1153, 1172, 1749, 1803, 1944
LmnI	GCTCC	4 cut(s)	661, 1429, 1533, 1745
Lsp1109I	GCAGC	7 cut(s)	77, 80, 980, 1113, 1120, 1525, 1528
LweI	GCATC	3 cut(s)	525, 1291, 1579
MaeI	CTAG	2 cut(s)	1598, 1778
MaeII	ACGT	5 cut(s)	928, 1357, 1501, 1615, 1717
MaeIII	GTNAC	3 cut(s)	116, 1243, 2161
MalI	GATC	9 cut(s)	569, 810, 888, 992, 1155, 1174, 1751, 1805, 1946
MbiI	CCGCTC	2 cut(s)	81, 1250
MboI	GATC	9 cut(s)	567, 808, 886, 990, 1153, 1172, 1749, 1803, 1944
MflI	RGATCY	3 cut(s)	886, 1153, 1172
MhlI	GDGCHC	4 cut(s)	21, 236, 456, 492
MlsI	TGGCCA	1 cut(s)	203
MluNI	TGGCCA	1 cut(s)	203
MlyI	GAGTC	1 cut(s)	1274
MmeI	TCCRAC	1 cut(s)	160
Mox20I	TGGCCA	1 cut(s)	203
MroXI	GAANNNNTTC	1 cut(s)	1923
MscI	TGGCCA	1 cut(s)	203
MseI	TTAA	8 cut(s)	267, 459, 753, 873, 1167, 1680, 1850, 1956
Msp20I	TGGCCA	1 cut(s)	203
MspI	CCGG	3 cut(s)	74, 1445, 1729
MspR9I	CCNGG	3 cut(s)	527, 1005, 1483
MvaI	CCWGG	3 cut(s)	527, 1005, 1483
MwoI	GCNNNNNNNGC	9 cut(s)	87, 755, 764, 968, 1108, 1376, 1520, 1760, 2027
NdeI	CATATG	1 cut(s)	464
NdeII	GATC	9 cut(s)	567, 808, 886, 990, 1153, 1172, 1749, 1803, 1944
NlaIII	CATG	6 cut(s)	367, 476, 775, 1376, 1391, 1669
NlaIV	GGNNCC	4 cut(s)	470, 1655, 1727, 1926
NmuCI	GTSAC	3 cut(s)	116, 1243, 2161
NspV	TTCGAA	1 cut(s)	2009
PdmI	GAANNNNTTC	1 cut(s)	1923
PfeI	GAWTC	2 cut(s)	1517, 1700
PflFI	GACNNNGTC	1 cut(s)	1223
PflMI	CCANNNNNTGG	1 cut(s)	2193
PinAI	ACCGGT	1 cut(s)	1444
PkrI	GCNGC	7 cut(s)	92, 95, 970, 1110, 1128, 1540, 1543
Ple19I	CGATCG	1 cut(s)	1752
PleI	GAGTC	1 cut(s)	1273
PmaCI	CACGTG	1 cut(s)	1718
PmlI	CACGTG	1 cut(s)	1718
PpsI	GAGTC	1 cut(s)	1273
Ppu21I	YACGTR	1 cut(s)	1718
PpuMI	RGGWCCY	1 cut(s)	1654
Psp5II	RGGWCCY	1 cut(s)	1654
Psp6I	CCWGG	3 cut(s)	525, 1003, 1481
PspCI	CACGTG	1 cut(s)	1718
PspGI	CCWGG	3 cut(s)	525, 1003, 1481
PspN4I	GGNNCC	4 cut(s)	470, 1655, 1727, 1926
PspPI	GGNCC	5 cut(s)	212, 548, 1442, 1485, 1654
PspPPI	RGGWCCY	1 cut(s)	1654
PstNI	CAGNNNCTG	2 cut(s)	1304, 2193
PsuI	RGATCY	3 cut(s)	886, 1153, 1172
PsyI	GACNNNGTC	1 cut(s)	1223
PvuI	CGATCG	1 cut(s)	1752
RgaI	GCGATCGC	1 cut(s)	1752
RsaI	GTAC	3 cut(s)	373, 927, 1882
RsaNI	GTAC	3 cut(s)	372, 926, 1881
SaqAI	TTAA	8 cut(s)	267, 459, 753, 873, 1167, 1680, 1850, 1956
SatI	GCNGC	7 cut(s)	91, 94, 969, 1109, 1127, 1539, 1542
Sau3AI	GATC	9 cut(s)	567, 808, 886, 990, 1153, 1172, 1749, 1803, 1944
Sau96I	GGNCC	5 cut(s)	212, 548, 1442, 1485, 1654
SchI	GAGTC	1 cut(s)	1274
ScrFI	CCNGG	3 cut(s)	527, 1005, 1483
SduI	GDGCHC	4 cut(s)	21, 236, 456, 492
SfaAI	GCGATCGC	1 cut(s)	1752
SfaNI	GCATC	3 cut(s)	525, 1291, 1579
SfcI	CTRYAG	2 cut(s)	438, 921
SfuI	TTCGAA	1 cut(s)	2009
SgfI	GCGATCGC	1 cut(s)	1752
SinI	GGWCC	3 cut(s)	548, 1442, 1654
SmlI	CTYRAG	2 cut(s)	49, 1658
SmoI	CTYRAG	2 cut(s)	49, 1658
SsiI	CCGC	4 cut(s)	81, 758, 818, 1248
SspI	AATATT	1 cut(s)	1741
SspMI	CTAG	2 cut(s)	1598, 1778
StyD4I	CCNGG	3 cut(s)	525, 1003, 1481
StyI	CCWWGG	3 cut(s)	36, 1995, 2054
TaaI	ACNGT	4 cut(s)	520, 925, 1829, 1856
TaiI	ACGT	5 cut(s)	931, 1360, 1504, 1618, 1720
TaqI	TCGA	6 cut(s)	32, 408, 811, 1507, 1648, 2009
TfiI	GAWTC	2 cut(s)	1517, 1700
Tru1I	TTAA	8 cut(s)	267, 459, 753, 873, 1167, 1680, 1850, 1956
Tru9I	TTAA	8 cut(s)	267, 459, 753, 873, 1167, 1680, 1850, 1956
TscAI	CASTG	4 cut(s)	523, 606, 693, 1861
TseFI	GTSAC	3 cut(s)	116, 1243, 2161
TseI	GCWGC	7 cut(s)	90, 93, 968, 1108, 1126, 1538, 1541
Tsp45I	GTSAC	3 cut(s)	116, 1243, 2161
TspDTI	ATGAA	9 cut(s)	747, 775, 810, 989, 1074, 1095, 1376, 1581, 1761
TspGWI	ACGGA	2 cut(s)	569, 1796
TspRI	CASTG	4 cut(s)	523, 606, 693, 1861
Tth111I	GACNNNGTC	1 cut(s)	1223
Van91I	CCANNNNNTGG	1 cut(s)	2193
VpaK11BI	GGWCC	3 cut(s)	548, 1442, 1654
XagI	CCTNNNNNAGG	1 cut(s)	831
XbaI	TCTAGA	1 cut(s)	1597
XcmI	CCANNNNNNNNNTGG	1 cut(s)	910
XmnI	GAANNNNTTC	1 cut(s)	1923
XspI	CTAG	2 cut(s)	1598, 1778
ZraI	GACGTC	1 cut(s)	1502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.