Prupe.3G079200_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
5852985 .. 5853977
993 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G079200.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 276 bp
ATGAGAGTTCACCATACGAATTTGGTTTCTCTAATTGGGTATTGCGATGAAGTGGCCAATGGAAATTTGCAACACCATATATTTTCTGCAGATATAACTAAAAAGGTTTTGACTTGGAAAGAGAGACTTCAAATTGTTATACACCCGCAAGCGAACAAAATAACACGGCTACTGATATTTTCAGGATTGGATTACCCTCACACTGGTTGCAAGCTGCCGATTGTACACAGAGACCTAAAGACATCTAATATCTTGGATTACCTTCACACTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

92

Amino Acids

10.44

Weight (kDa)

9.06

Isoelectric Point (pI)

22.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 146
AcoI YGGCCR 1 cut(s) 54
AcsI RAATTY 2 cut(s) 19, 64
AfaI GTAC 1 cut(s) 225
AfiI CCNNNNNNNGG 1 cut(s) 203
AgsI TTSAA 1 cut(s) 131
AluBI AGCT 1 cut(s) 214
AluI AGCT 1 cut(s) 214
Alw26I GTCTC 2 cut(s) 118, 225
AoxI GGCC 1 cut(s) 54
ApeKI GCWGC 1 cut(s) 214
ApoI RAATTY 2 cut(s) 19, 64
BalI TGGCCA 1 cut(s) 56
BbvI GCAGC 1 cut(s) 201
BceAI ACGGC 1 cut(s) 182
BcoDI GTCTC 2 cut(s) 118, 225
BfmI CTRYAG 1 cut(s) 87
BisI GCNGC 1 cut(s) 215
BlsI GCNGC 1 cut(s) 216
BsaI GGTCTC 1 cut(s) 225
Bsc4I CCNNNNNNNGG 1 cut(s) 203
Bse1I ACTGG 1 cut(s) 208
BseLI CCNNNNNNNGG 1 cut(s) 203
BseNI ACTGG 1 cut(s) 208
BseXI GCAGC 1 cut(s) 201
BshFI GGCC 1 cut(s) 56
BslI CCNNNNNNNGG 1 cut(s) 203
BsmAI GTCTC 2 cut(s) 118, 225
BsnI GGCC 1 cut(s) 56
Bso31I GGTCTC 1 cut(s) 225
Bsp1407I TGTACA 1 cut(s) 223
BspACI CCGC 1 cut(s) 146
BspANI GGCC 1 cut(s) 56
BspMAI CTGCAG 1 cut(s) 91
BspTNI GGTCTC 1 cut(s) 225
BsrGI TGTACA 1 cut(s) 223
BsrI ACTGG 1 cut(s) 208
BstAUI TGTACA 1 cut(s) 223
BstC8I GCNNGC 2 cut(s) 150, 212
BstMAI GTCTC 2 cut(s) 118, 225
BstSFI CTRYAG 1 cut(s) 87
BstV1I GCAGC 1 cut(s) 201
BsuRI GGCC 1 cut(s) 56
BtgZI GCGATG 1 cut(s) 60
BtsI GCAGTG 1 cut(s) 267
BtsIMutI CAGTG 2 cut(s) 201, 267
Cac8I GCNNGC 2 cut(s) 150, 212
Csp6I GTAC 1 cut(s) 224
CviJI RGCY 3 cut(s) 56, 169, 214
CviKI_1 RGCY 3 cut(s) 56, 169, 214
CviQI GTAC 1 cut(s) 224
EaeI YGGCCR 1 cut(s) 54
Eco31I GGTCTC 1 cut(s) 225
FaiI YATR 5 cut(s) 15, 78, 80, 95, 140
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FauI CCCGC 1 cut(s) 153
Fnu4HI GCNGC 1 cut(s) 215
Fsp4HI GCNGC 1 cut(s) 215
GluI GCNGC 1 cut(s) 215
HaeIII GGCC 1 cut(s) 56
Hpy166II GTNNAC 2 cut(s) 10, 226
Hpy188III TCNNGA 1 cut(s) 183
Hpy8I GTNNAC 2 cut(s) 10, 226
HpyAV CCTTC 1 cut(s) 272
HpyCH4V TGCA 3 cut(s) 70, 89, 210
LpnPI CCDG 2 cut(s) 168, 189
Lsp1109I GCAGC 1 cut(s) 201
MlsI TGGCCA 1 cut(s) 56
MluCI AATT 4 cut(s) 19, 33, 64, 132
MluNI TGGCCA 1 cut(s) 56
MnlI CCTC 1 cut(s) 207
Mox20I TGGCCA 1 cut(s) 56
MscI TGGCCA 1 cut(s) 56
Msp20I TGGCCA 1 cut(s) 56
PkrI GCNGC 1 cut(s) 216
PstI CTGCAG 1 cut(s) 91
RsaI GTAC 1 cut(s) 225
RsaNI GTAC 1 cut(s) 224
SatI GCNGC 1 cut(s) 215
SetI ASST 4 cut(s) 108, 216, 237, 264
SfcI CTRYAG 1 cut(s) 87
SgeI CNNG 8 cut(s) 126, 157, 161, 177, 195, 216, 223, 265
Sse9I AATT 4 cut(s) 19, 33, 64, 132
SsiI CCGC 1 cut(s) 146
TasI AATT 4 cut(s) 19, 33, 64, 132
TatI WGTACW 1 cut(s) 223
TscAI CASTG 2 cut(s) 208, 274
TseI GCWGC 1 cut(s) 214
TspDTI ATGAA 1 cut(s) 63
TspRI CASTG 2 cut(s) 208, 274
XapI RAATTY 2 cut(s) 19, 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.