Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

5873032 .. 5876264

Gene Structure 3233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G079300.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGGTAAGGTTGATGTTGATCGAAGACCAATAGGATTCTTTTTGCCCATACAGGCTCCTCCTGATGACGATGGAAGTAGCGTTTTACCTATCTCAGCATCCCAAGGGACTGAAGTTAGTAAGGATGAGAAGCAATTCATGAATAAGGAGGAGGAGTTGAGCAAAACCAACTTGCCTTGTACTTCAGTTACGACGCATACTAGGGCTATTGGGATCATATATCCTCCCCTAGACATCAGAAACATTGTTGACAAAACTGCTGAATTCGTGGCGAAAAATGGACCTGAATTTGAGCAGAGGGTCTTAGCTAAGAATACTGGAAATGCAAAGTTCAACTTTTTGATTTCCTCAAGTCCCTTCCATGCATATTATCAGCATCGGTTGTCTGAATTCCGTGGACAGCAACCTTCTTCTCAGTTTGCAGATTCTGCTGCACCCGAGTCGGCCCCACCAGCTCCGGCTGCAGACGGTGAAGCAGGAGGAGCACCAAAGCCTGACCTCTCTGCCCACTTTAAACCAGCGTGCAAAGTGCTCGAAACACCAGAGGCCGAGCAGTATACTGTTCGGCTTCCTCAAGGAATAACTGGAGAAGAGTTGGATACTGTTATGCTCACAGCCCAGTTTGTGGCTCGAAATGGGAAATCTTTTTTGACAGGATTGACAAGCAGAGAAATCAATAACCCCCAGTTCCATTTTCTGAGGCCTAAGCATAGTATGTTCTCATTTTTCACTTATCTTGCTGATGCGTATTCAAAGGTGTTGATGCCGCCTAAGGGTTTGACAGAGAAGCTTAAGAAAAGTGTTGCAGACAATGCAACCATGCTTGAAAGGTGCGTGAATCGACTGGAGTGGGAACGTTCACAAGAGCAGGCAAGGCACAAGGCTGAAGATGAAATTGAGCAGGAAAGGATACAAGCGGCTATGATTGATTGGCACGATTTTGTTGTGGTTGAAACGATTTACTTTGCTGATCATGAGGATGAGGATTTACCTCCTCCAATAGCCCCTGAGGAAGTTATAAGGAGAAGCAAGGTCACAAATATGGAAGAAGATATTGTCGAGACTGGTAAGGAGGTGGAAATGGAATTGGATGAAGAAGACTGGAGGACAGACAGACTTGAAGAAAAGGAGACTAAGGTGGCAGAGGATCCAGAACCACCAATGAGAATTGTGAACAACTGGAAGAGACCTGAGGACAGGATCCTTTCCCGAAGAGACCCAACAAAGTATGTCATTTCCCCAATCACTGGGGAGCTTATCCCTATCAATGAGATGTCTGAACACATGAGGATTTCTCTTATTGATCCAAAATACAAGGAGCAGAAAGAACTAATGTTCGCTAAGCTTCGGGTGACTACTCTTGCTCAGGATGATGAAATCTCAAGGAATATTCTGGGCCTTGCACGAACCCGCCCTGACATTTTCGGTACCACAGAGGAAGAGGTTTCTAACGCTGTCAAGGCTGAGATTGCAAAAAAGAATGATGAGCAACCAAAACAGGTCATATGGGACGGTCACACTGGAAGCATTGGCGTCACAGCAAATCAAGCCATTTCACAGAATGATGTATTTAACGAAGATGCAAAGAGTCTTCCTGGTCCAAAACCTGCTGTGCCTTCAGTTCGTCCTCTTCCCGCACCACATGGTCTCGCATTGAATCTACCTCGTGTTCATCCAAACACAGTCCAGTATTCTGCTCCAACTAGCAGTGGCCTCCCTGTACCTCCACCAAGGCCCCCAGTTGTCCAATATCAATCAGTTGCATCACCTGGACCTCCAATGCCCATGAGTTCTGGACAGCAGCCCCTTTCAATGAACCGACAGATGCCTCCATCAATTTCTATGAGTGCACCTAGTATTCCTGTACCACCTCCACCTGGTTCTCAGTTTGCACTCATGCAAGCTTATATCCCCCTTCCTGTTCCTCCACCTGTAATGCAAATGATGCCACCACCACCACCTCCACCTCAGAGAGCCCCTTGTCCGCTTCCAGAAGAACCTGCACCAAAGCGCCAGAAGCTCGATGATTCTATGCTTATTCCAGAAGATCAGTTTCTGGCACAGCAGCCAGTGCAGGGACCTGTTCGCATCACAGTATCCATCCCCAATGTTGATGAAGGTAATCGGAAGGGACAACTGTTGGAGATTACATTGCAGTCTTTATCCGAAACTGTTGGGAGTCTCAAAGAAAAAATTTCTGGGGAGATCCAGCTTCCTGCAAACAAGCAGAAACTGAGTGGAAAACCTGGTTTTCTCAAGGACAATATGTCGCTTGCATATTACAATGTTGGAGCAGGAGAAACACTAACTCTTTCATTAAGAGAGCGCGGTGGAAGAAAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000245 GO:0000375 GO:0000377 GO:0000381 GO:0000389 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005686 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0010468 GO:0016043 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0031323 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048024 GO:0050684 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065003 GO:0065007 GO:0071004 GO:0071010 GO:0071013 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0097525 GO:0120114 GO:1901360 GO:1901363 GO:1902494 GO:1903311 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP21_like_P Surp ubiquitin

Protein Analysis

782

Amino Acids

86.69

Weight (kDa)

5.39

Isoelectric Point (pI)

56.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1019
Acc36I	ACCTGC	2 cut(s)	1615, 2008
Acc65I	GGTACC	1 cut(s)	1427
AccB1I	GGYRCC	1 cut(s)	1427
AccB7I	CCANNNNNTGG	2 cut(s)	625, 1247
AccI	GTMKAC	1 cut(s)	557
AccII	CGCG	1 cut(s)	2328
AciI	CCGC	6 cut(s)	767, 917, 1411, 1635, 1985, 2328
AclI	AACGTT	1 cut(s)	856
AclWI	GGATC	7 cut(s)	221, 1142, 1155, 1195, 1208, 1298, 2200
AcsI	RAATTY	4 cut(s)	263, 287, 389, 2193
AcuI	CTGAAG	4 cut(s)	132, 168, 906, 1602
AcyI	GRCGYC	1 cut(s)	1533
AfaI	GTAC	4 cut(s)	181, 1429, 1722, 1866
AfiI	CCNNNNNNNGG	5 cut(s)	625, 773, 1247, 1877, 2075
AflII	CTTAAG	1 cut(s)	791
AgsI	TTSAA	7 cut(s)	334, 753, 827, 953, 1121, 1657, 1812
AhdI	GACNNNNNGTC	1 cut(s)	2266
AjnI	CCWGG	4 cut(s)	1594, 1768, 1876, 2245
AluBI	AGCT	8 cut(s)	308, 455, 790, 1255, 1345, 1904, 2020, 2212
AluI	AGCT	8 cut(s)	308, 455, 790, 1255, 1345, 1904, 2020, 2212
Alw21I	GWGCWC	3 cut(s)	487, 534, 1852
Alw26I	GTCTC	6 cut(s)	1055, 1124, 1180, 1209, 1652, 2186
Alw44I	GTGCAC	1 cut(s)	1848
AlwI	GGATC	7 cut(s)	221, 1142, 1155, 1195, 1208, 1298, 2200
AlwNI	CAGNNNCTG	3 cut(s)	428, 2056, 2233
Ama87I	CYCGRG	1 cut(s)	437
AoxI	GGCC	6 cut(s)	444, 546, 701, 1396, 1711, 1733
ApaLI	GTGCAC	1 cut(s)	1848
ApeKI	GCWGC	4 cut(s)	431, 461, 1801, 2065
ApoI	RAATTY	4 cut(s)	263, 287, 389, 2193
Asp700I	GAANNNNTTC	1 cut(s)	134
Asp718I	GGTACC	1 cut(s)	1427
AspLEI	GCGC	2 cut(s)	2013, 2328
AspS9I	GGNCC	7 cut(s)	281, 445, 1396, 1598, 1734, 1772, 2078
AsuHPI	GGTGA	3 cut(s)	482, 1363, 1758
AvaI	CYCGRG	1 cut(s)	437
AvaII	GGWCC	4 cut(s)	281, 1598, 1772, 2078
AxyI	CCTNAGG	3 cut(s)	771, 1008, 1191
BaeGI	GKGCMC	1 cut(s)	1852
BamHI	GGATCC	2 cut(s)	1147, 1200
BanI	GGYRCC	1 cut(s)	1427
BanII	GRGCYC	1 cut(s)	1978
BauI	CACGAG	1 cut(s)	1665
BbsI	GAAGAC	3 cut(s)	31, 1104, 1583
Bbv12I	GWGCWC	3 cut(s)	487, 534, 1852
BbvI	GCAGC	4 cut(s)	418, 448, 1813, 2077
BccI	CCATC	3 cut(s)	65, 1840, 2108
BcgI	CGANNNNNNTGC	4 cut(s)	423, 457, 514, 548
BciT130I	CCWGG	4 cut(s)	1596, 1770, 1878, 2247
BciVI	GTATCC	3 cut(s)	592, 903, 2107
BclI	TGATCA	1 cut(s)	970
BcoDI	GTCTC	6 cut(s)	1055, 1124, 1180, 1209, 1652, 2186
BfaI	CTAG	4 cut(s)	201, 230, 1704, 1854
BfmI	CTRYAG	1 cut(s)	462
BfoI	RGCGCY	1 cut(s)	2014
BfrI	CTTAAG	1 cut(s)	791
BfuAI	ACCTGC	2 cut(s)	1615, 2008
BfuI	GTATCC	3 cut(s)	592, 903, 2107
BisI	GCNGC	6 cut(s)	432, 462, 767, 918, 1802, 2066
BlpI	GCTNAGC	1 cut(s)	1341
BlsI	GCNGC	6 cut(s)	433, 463, 768, 919, 1803, 2067
Bme1390I	CCNGG	4 cut(s)	1596, 1770, 1878, 2247
Bme18I	GGWCC	4 cut(s)	281, 1598, 1772, 2078
BmeRI	GACNNNNNGTC	1 cut(s)	2266
BmeT110I	CYCGRG	1 cut(s)	437
BmgT120I	GGNCC	7 cut(s)	281, 445, 1396, 1598, 1734, 1772, 2078
BmiI	GGNNCC	7 cut(s)	57, 447, 1149, 1202, 1429, 1736, 2079
BmrFI	CCNGG	4 cut(s)	1596, 1770, 1878, 2247
BmrI	ACTGGG	4 cut(s)	613, 679, 1257, 1733
BmsI	GCATC	9 cut(s)	107, 385, 733, 753, 1570, 1772, 1815, 1935, 2097
BmuI	ACTGGG	4 cut(s)	613, 679, 1257, 1733
BpiI	GAAGAC	3 cut(s)	31, 1104, 1583
BplI	GAGNNNNNCTC	2 cut(s)	1279, 1311
BpmI	CTGGAG	3 cut(s)	606, 866, 1123
Bpu10I	CCTNAGC	2 cut(s)	705, 1365
Bpu1102I	GCTNAGC	1 cut(s)	1341
BpuEI	CTTGAG	4 cut(s)	334, 558, 1366, 2240
BsaBI	GATNNNNATC	1 cut(s)	18
BsaHI	GRCGYC	1 cut(s)	1533
BsaI	GGTCTC	3 cut(s)	1180, 1209, 1652
BsaJI	CCNNGG	3 cut(s)	103, 394, 1730
BsaXI	ACNNNNNCTCC	2 cut(s)	140, 170
Bsc4I	CCNNNNNNNGG	5 cut(s)	625, 773, 1247, 1877, 2075
Bse21I	CCTNAGG	3 cut(s)	771, 1008, 1191
Bse3DI	GCAATG	1 cut(s)	2150
Bse8I	GATNNNNATC	1 cut(s)	18
BseBI	CCWGG	4 cut(s)	1596, 1770, 1878, 2247
BseDI	CCNNGG	3 cut(s)	103, 394, 1730
BseGI	GGATG	7 cut(s)	98, 130, 985, 1096, 1375, 1672, 2100
BseJI	GATNNNNATC	1 cut(s)	18
BseLI	CCNNNNNNNGG	5 cut(s)	625, 773, 1247, 1877, 2075
BseMI	GCAATG	1 cut(s)	2150
BseRI	GAGGAG	5 cut(s)	48, 164, 167, 495, 984
BseSI	GKGCMC	1 cut(s)	1852
BseXI	GCAGC	4 cut(s)	418, 448, 1813, 2077
BsgI	GTGCAG	3 cut(s)	417, 1986, 2093
Bsh1236I	CGCG	1 cut(s)	2328
BshFI	GGCC	6 cut(s)	446, 548, 703, 1398, 1713, 1735
BshNI	GGYRCC	1 cut(s)	1427
BsiHKAI	GWGCWC	3 cut(s)	487, 534, 1852
BsiHKCI	CYCGRG	1 cut(s)	437
BsiSI	CCGG	1 cut(s)	458
BslFI	GGGAC	5 cut(s)	121, 339, 1523, 2091, 2145
BslI	CCNNNNNNNGG	5 cut(s)	625, 773, 1247, 1877, 2075
BsmAI	GTCTC	6 cut(s)	1055, 1124, 1180, 1209, 1652, 2186
BsmFI	GGGAC	5 cut(s)	121, 339, 1523, 2091, 2145
BsnI	GGCC	6 cut(s)	446, 548, 703, 1398, 1713, 1735
Bso31I	GGTCTC	3 cut(s)	1180, 1209, 1652
BsoBI	CYCGRG	1 cut(s)	437
Bsp1286I	GDGCHC	4 cut(s)	487, 534, 1852, 1978
Bsp143I	GATC	8 cut(s)	19, 213, 970, 1147, 1200, 1303, 2047, 2205
Bsp1720I	GCTNAGC	1 cut(s)	1341
BspACI	CCGC	6 cut(s)	767, 917, 1411, 1635, 1985, 2328
BspANI	GGCC	6 cut(s)	446, 548, 703, 1398, 1713, 1735
BspFNI	CGCG	1 cut(s)	2328
BspHI	TCATGA	2 cut(s)	138, 973
BspLI	GGNNCC	7 cut(s)	57, 447, 1149, 1202, 1429, 1736, 2079
BspMAI	CTGCAG	1 cut(s)	466
BspMI	ACCTGC	2 cut(s)	1615, 2008
BspPI	GGATC	7 cut(s)	221, 1142, 1155, 1195, 1208, 1298, 2200
BspT107I	GGYRCC	1 cut(s)	1427
BspTI	CTTAAG	1 cut(s)	791
BspTNI	GGTCTC	3 cut(s)	1180, 1209, 1652
BsrDI	GCAATG	1 cut(s)	2150
BssECI	CCNNGG	3 cut(s)	103, 394, 1730
BssMI	GATC	8 cut(s)	19, 213, 970, 1147, 1200, 1303, 2047, 2205
BssNAI	GTATAC	1 cut(s)	558
BssNI	GRCGYC	1 cut(s)	1533
BssSI	CACGAG	1 cut(s)	1665
BssT1I	CCWWGG	2 cut(s)	103, 1730
Bst1107I	GTATAC	1 cut(s)	558
Bst2BI	CACGAG	1 cut(s)	1665
Bst2UI	CCWGG	4 cut(s)	1596, 1770, 1878, 2247
Bst4CI	ACNGT	8 cut(s)	470, 562, 604, 1514, 1684, 2095, 2139, 2173
Bst6I	CTCTTC	5 cut(s)	585, 1178, 1207, 1434, 1635
BstACI	GRCGYC	1 cut(s)	1533
BstAFI	CTTAAG	1 cut(s)	791
BstAPI	GCANNNNNTGC	4 cut(s)	428, 812, 1945, 2071
BstC8I	GCNNGC	4 cut(s)	523, 870, 1902, 2274
BstDSI	CCRYGG	1 cut(s)	394
BstF5I	GGATG	7 cut(s)	98, 130, 985, 1096, 1375, 1672, 2100
BstFNI	CGCG	1 cut(s)	2328
BstH2I	RGCGCY	1 cut(s)	2014
BstHHI	GCGC	2 cut(s)	2013, 2328
BstKTI	GATC	8 cut(s)	22, 216, 973, 1150, 1203, 1306, 2050, 2208
BstMAI	GTCTC	6 cut(s)	1055, 1124, 1180, 1209, 1652, 2186
BstMBI	GATC	8 cut(s)	19, 213, 970, 1147, 1200, 1303, 2047, 2205
BstNI	CCWGG	4 cut(s)	1596, 1770, 1878, 2247
BstSCI	CCNGG	4 cut(s)	1594, 1768, 1876, 2245
BstSFI	CTRYAG	1 cut(s)	462
BstSLI	GKGCMC	1 cut(s)	1852
BstUI	CGCG	1 cut(s)	2328
BstV1I	GCAGC	4 cut(s)	418, 448, 1813, 2077
BstV2I	GAAGAC	3 cut(s)	31, 1104, 1583
BstX2I	RGATCY	3 cut(s)	1147, 1200, 2205
BstYI	RGATCY	3 cut(s)	1147, 1200, 2205
BstZ17I	GTATAC	1 cut(s)	558
Bsu36I	CCTNAGG	3 cut(s)	771, 1008, 1191
BsuI	GTATCC	3 cut(s)	592, 903, 2107
BsuRI	GGCC	6 cut(s)	446, 548, 703, 1398, 1713, 1735
BtgI	CCRYGG	1 cut(s)	394
BtsCI	GGATG	7 cut(s)	98, 130, 985, 1096, 1375, 1672, 2100
BtsI	GCAGTG	1 cut(s)	1714
BtsIMutI	CAGTG	4 cut(s)	1245, 1518, 1714, 2076
BveI	ACCTGC	2 cut(s)	1615, 2008
Cac8I	GCNNGC	4 cut(s)	523, 870, 1902, 2274
CaiI	CAGNNNCTG	3 cut(s)	428, 2056, 2233
CciI	TCATGA	2 cut(s)	138, 973
CfoI	GCGC	2 cut(s)	2013, 2328
Cfr13I	GGNCC	7 cut(s)	281, 445, 1396, 1598, 1734, 1772, 2078
CseI	GACGC	2 cut(s)	202, 1522
CsiI	ACCWGGT	2 cut(s)	1876, 2245
Csp6I	GTAC	4 cut(s)	180, 1428, 1721, 1865
CviAII	CATG	8 cut(s)	139, 362, 820, 974, 1285, 1643, 1786, 1897
CviQI	GTAC	4 cut(s)	180, 1428, 1721, 1865
DpnI	GATC	8 cut(s)	21, 215, 972, 1149, 1202, 1305, 2049, 2207
DpnII	GATC	8 cut(s)	19, 213, 970, 1147, 1200, 1303, 2047, 2205
DraI	TTTAAA	1 cut(s)	514
DriI	GACNNNNNGTC	1 cut(s)	2266
Eam1104I	CTCTTC	5 cut(s)	585, 1178, 1207, 1434, 1635
Eam1105I	GACNNNNNGTC	1 cut(s)	2266
EarI	CTCTTC	5 cut(s)	585, 1178, 1207, 1434, 1635
Eco130I	CCWWGG	2 cut(s)	103, 1730
Eco147I	AGGCCT	1 cut(s)	703
Eco24I	GRGCYC	1 cut(s)	1978
Eco31I	GGTCTC	3 cut(s)	1180, 1209, 1652
Eco47I	GGWCC	4 cut(s)	281, 1598, 1772, 2078
Eco57I	CTGAAG	4 cut(s)	132, 168, 906, 1602
Eco81I	CCTNAGG	3 cut(s)	771, 1008, 1191
Eco88I	CYCGRG	1 cut(s)	437
EcoO109I	RGGNCCY	2 cut(s)	1734, 2078
EcoRI	GAATTC	2 cut(s)	263, 389
EcoRII	CCWGG	4 cut(s)	1594, 1768, 1876, 2245
EcoT14I	CCWWGG	2 cut(s)	103, 1730
EcoT22I	ATGCAT	1 cut(s)	367
EcoT38I	GRGCYC	1 cut(s)	1978
ErhI	CCWWGG	2 cut(s)	103, 1730
FaeI	CATG	8 cut(s)	142, 365, 823, 977, 1288, 1646, 1789, 1900
FalI	AAGNNNNNCTT	2 cut(s)	320, 352
FaqI	GGGAC	5 cut(s)	121, 339, 1523, 2091, 2145
FatI	CATG	8 cut(s)	138, 361, 819, 973, 1284, 1642, 1785, 1896
FauI	CCCGC	2 cut(s)	1418, 1642
FauNDI	CATATG	1 cut(s)	1505
FbaI	TGATCA	1 cut(s)	970
FblI	GTMKAC	1 cut(s)	557
Fnu4HI	GCNGC	6 cut(s)	432, 462, 767, 918, 1802, 2066
FokI	GGATG	7 cut(s)	85, 137, 992, 1103, 1382, 1659, 2087
FriOI	GRGCYC	1 cut(s)	1978
Fsp4HI	GCNGC	6 cut(s)	432, 462, 767, 918, 1802, 2066
FspBI	CTAG	4 cut(s)	201, 230, 1704, 1854
GlaI	GCGC	2 cut(s)	2012, 2327
GluI	GCNGC	6 cut(s)	432, 462, 767, 918, 1802, 2066
GsuI	CTGGAG	3 cut(s)	606, 866, 1123
HaeII	RGCGCY	1 cut(s)	2014
HaeIII	GGCC	6 cut(s)	446, 548, 703, 1398, 1713, 1735
HapII	CCGG	1 cut(s)	458
HgaI	GACGC	2 cut(s)	202, 1522
HhaI	GCGC	2 cut(s)	2013, 2328
Hin1I	GRCGYC	1 cut(s)	1533
Hin1II	CATG	8 cut(s)	142, 365, 823, 977, 1288, 1646, 1789, 1900
Hin6I	GCGC	2 cut(s)	2011, 2326
HinP1I	GCGC	2 cut(s)	2011, 2326
HincII	GTYRAC	1 cut(s)	250
HindII	GTYRAC	1 cut(s)	250
HindIII	AAGCTT	3 cut(s)	788, 1343, 1902
HinfI	GANTC	8 cut(s)	36, 425, 440, 838, 1588, 1657, 2027, 2179
HpaII	CCGG	1 cut(s)	458
HphI	GGTGA	3 cut(s)	482, 1363, 1758
Hpy166II	GTNNAC	6 cut(s)	250, 398, 558, 860, 1174, 1850
Hpy188I	TCNGA	7 cut(s)	239, 388, 699, 1279, 1971, 2127, 2167
Hpy8I	GTNNAC	6 cut(s)	250, 398, 558, 860, 1174, 1850
Hpy99I	CGWCG	1 cut(s)	196
HpyAV	CCTTC	6 cut(s)	367, 417, 1626, 1925, 2111, 2122
HpyCH4III	ACNGT	8 cut(s)	470, 562, 604, 1514, 1684, 2095, 2139, 2173
HpyCH4IV	ACGT	1 cut(s)	856
HpySE526I	ACGT	1 cut(s)	856
Hsp92I	GRCGYC	1 cut(s)	1533
Hsp92II	CATG	8 cut(s)	142, 365, 823, 977, 1288, 1646, 1789, 1900
HspAI	GCGC	2 cut(s)	2011, 2326
KpnI	GGTACC	1 cut(s)	1431
Ksp22I	TGATCA	1 cut(s)	970
Kzo9I	GATC	8 cut(s)	19, 213, 970, 1147, 1200, 1303, 2047, 2205
LmnI	GCTCC	7 cut(s)	61, 460, 482, 1252, 1318, 1702, 2291
Lsp1109I	GCAGC	4 cut(s)	418, 448, 1813, 2077
LweI	GCATC	9 cut(s)	107, 385, 733, 753, 1570, 1772, 1815, 1935, 2097
MabI	ACCWGGT	2 cut(s)	1876, 2245
MaeI	CTAG	4 cut(s)	201, 230, 1704, 1854
MaeII	ACGT	1 cut(s)	856
MaeIII	GTNAC	5 cut(s)	187, 1033, 1351, 1514, 1534
MalI	GATC	8 cut(s)	21, 215, 972, 1149, 1202, 1305, 2049, 2207
MboI	GATC	8 cut(s)	19, 213, 970, 1147, 1200, 1303, 2047, 2205
MflI	RGATCY	3 cut(s)	1147, 1200, 2205
MhlI	GDGCHC	4 cut(s)	487, 534, 1852, 1978
MluCI	AATT	9 cut(s)	134, 263, 287, 389, 894, 1085, 1167, 1836, 2193
MlyI	GAGTC	3 cut(s)	449, 1597, 2188
MmeI	TCCRAC	4 cut(s)	576, 1724, 2121, 2269
Mph1103I	ATGCAT	1 cut(s)	367
MroXI	GAANNNNTTC	1 cut(s)	134
MseI	TTAA	4 cut(s)	513, 792, 1572, 2318
MslI	CAYNNNNRTG	2 cut(s)	978, 1040
MspCI	CTTAAG	1 cut(s)	791
MspI	CCGG	1 cut(s)	458
MspR9I	CCNGG	4 cut(s)	1596, 1770, 1878, 2247
MvaI	CCWGG	4 cut(s)	1596, 1770, 1878, 2247
MvnI	CGCG	1 cut(s)	2328
NdeI	CATATG	1 cut(s)	1505
NdeII	GATC	8 cut(s)	19, 213, 970, 1147, 1200, 1303, 2047, 2205
NlaIII	CATG	8 cut(s)	142, 365, 823, 977, 1288, 1646, 1789, 1900
NlaIV	GGNNCC	7 cut(s)	57, 447, 1149, 1202, 1429, 1736, 2079
NmeAIII	GCCGAG	1 cut(s)	574
NmuCI	GTSAC	4 cut(s)	1033, 1351, 1514, 1534
NsiI	ATGCAT	1 cut(s)	367
PagI	TCATGA	2 cut(s)	138, 973
PceI	AGGCCT	1 cut(s)	703
PdmI	GAANNNNTTC	1 cut(s)	134
PfeI	GAWTC	5 cut(s)	36, 425, 838, 1657, 2027
PflMI	CCANNNNNTGG	2 cut(s)	625, 1247
PkrI	GCNGC	6 cut(s)	433, 463, 768, 919, 1803, 2067
PleI	GAGTC	3 cut(s)	448, 1596, 2187
PpsI	GAGTC	3 cut(s)	448, 1596, 2187
PpuMI	RGGWCCY	1 cut(s)	2078
PsiI	TTATAA	1 cut(s)	1019
Psp1406I	AACGTT	1 cut(s)	856
Psp5II	RGGWCCY	1 cut(s)	2078
Psp6I	CCWGG	4 cut(s)	1594, 1768, 1876, 2245
PspGI	CCWGG	4 cut(s)	1594, 1768, 1876, 2245
PspN4I	GGNNCC	7 cut(s)	57, 447, 1149, 1202, 1429, 1736, 2079
PspPI	GGNCC	7 cut(s)	281, 445, 1396, 1598, 1734, 1772, 2078
PspPPI	RGGWCCY	1 cut(s)	2078
PstI	CTGCAG	1 cut(s)	466
PstNI	CAGNNNCTG	3 cut(s)	428, 2056, 2233
PsuI	RGATCY	3 cut(s)	1147, 1200, 2205
RsaI	GTAC	4 cut(s)	181, 1429, 1722, 1866
RsaNI	GTAC	4 cut(s)	180, 1428, 1721, 1865
RseI	CAYNNNNRTG	2 cut(s)	978, 1040
SaqAI	TTAA	4 cut(s)	513, 792, 1572, 2318
SatI	GCNGC	6 cut(s)	432, 462, 767, 918, 1802, 2066
Sau3AI	GATC	8 cut(s)	19, 213, 970, 1147, 1200, 1303, 2047, 2205
Sau96I	GGNCC	7 cut(s)	281, 445, 1396, 1598, 1734, 1772, 2078
SchI	GAGTC	3 cut(s)	449, 1597, 2188
ScrFI	CCNGG	4 cut(s)	1596, 1770, 1878, 2247
SduI	GDGCHC	4 cut(s)	487, 534, 1852, 1978
SexAI	ACCWGGT	2 cut(s)	1876, 2245
SfaNI	GCATC	9 cut(s)	107, 385, 733, 753, 1570, 1772, 1815, 1935, 2097
SfcI	CTRYAG	1 cut(s)	462
SinI	GGWCC	4 cut(s)	281, 1598, 1772, 2078
SmiMI	CAYNNNNRTG	2 cut(s)	978, 1040
SmlI	CTYRAG	5 cut(s)	349, 573, 791, 1381, 2255
SmoI	CTYRAG	5 cut(s)	349, 573, 791, 1381, 2255
Sse9I	AATT	9 cut(s)	134, 263, 287, 389, 894, 1085, 1167, 1836, 2193
SseBI	AGGCCT	1 cut(s)	703
SsiI	CCGC	6 cut(s)	767, 917, 1411, 1635, 1985, 2328
SspI	AATATT	1 cut(s)	1390
SspMI	CTAG	4 cut(s)	201, 230, 1704, 1854
StuI	AGGCCT	1 cut(s)	703
StyD4I	CCNGG	4 cut(s)	1594, 1768, 1876, 2245
StyI	CCWWGG	2 cut(s)	103, 1730
TaaI	ACNGT	8 cut(s)	470, 562, 604, 1514, 1684, 2095, 2139, 2173
TaiI	ACGT	1 cut(s)	859
TaqI	TCGA	6 cut(s)	22, 534, 631, 841, 1059, 2022
TasI	AATT	9 cut(s)	134, 263, 287, 389, 894, 1085, 1167, 1836, 2193
TatI	WGTACW	1 cut(s)	179
TauI	GCSGC	2 cut(s)	769, 920
TfiI	GAWTC	5 cut(s)	36, 425, 838, 1657, 2027
Tru1I	TTAA	4 cut(s)	513, 792, 1572, 2318
Tru9I	TTAA	4 cut(s)	513, 792, 1572, 2318
TscAI	CASTG	4 cut(s)	1252, 1525, 1714, 2076
TseFI	GTSAC	4 cut(s)	1033, 1351, 1514, 1534
TseI	GCWGC	4 cut(s)	431, 461, 1801, 2065
Tsp45I	GTSAC	4 cut(s)	1033, 1351, 1514, 1534
TspDTI	ATGAA	9 cut(s)	127, 155, 906, 1107, 1389, 1661, 1829, 2130, 2304
TspGWI	ACGGA	1 cut(s)	383
TspRI	CASTG	4 cut(s)	1252, 1525, 1714, 2076
Van91I	CCANNNNNTGG	2 cut(s)	625, 1247
Vha464I	CTTAAG	1 cut(s)	791
VneI	GTGCAC	1 cut(s)	1848
VpaK11BI	GGWCC	4 cut(s)	281, 1598, 1772, 2078
XapI	RAATTY	4 cut(s)	263, 287, 389, 2193
XmiI	GTMKAC	1 cut(s)	557
XmnI	GAANNNNTTC	1 cut(s)	134
XspI	CTAG	4 cut(s)	201, 230, 1704, 1854
Zsp2I	ATGCAT	1 cut(s)	367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.