Prupe.3G101700_v2.0.a1

Shikimate O-hydroxycinnamoyltransferase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Forward (+)
7902701 .. 7905279
2579 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G101700.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 1332 bp
ATGGCGGAGAAGGTGATGGTGAGCATAAGGGAGTCAACAATGGTGAGGCCAGCCGAGGAGTCCACGCCTCGGGGCTCCCTGTGGCTCTCCAATTCAGACCTAGCGTTCCCACCCTTTCACACGTCCAGTGTTTACTTTTACAAATCTAGTGGTGAGCACAACTTTTTTGACAAGGGAGTGCTCAAGCAGGCCCTCGGCAAGGCCCTTGTGCCCTTCTACCCCATGGCCGGTCGCTTCAAGCTCAACGACCAGAACGGCCGTGTGGAGATTGATTGCAATGCGGAGGGAGTGGTCTTTGTTGTAGCGGAAAGCAGCTCTGCTGTTGATGATTTTGGTGATTTTGCGCCTACTCCCGATTTCCTGACACTGATCCCTACAATTGATTACTCTGGTGGGATATCCTCATATCCAATTTTGGCGTTACAGATCACGTACTTCAAATGCGGTGGTGTGTCACTTGGTGTTGGCATGGATCACCGCGTTGCAGATGGAGTTTCTGGTCTCCACTTTGTAAATGCATGGTCTGATATTGCTCGTGGTGATCTCTCAAATATTAAACCGCCCTTCATGGACAGGACATTACTTCGTGCCCGAGACCCACCTCAGCCTGCATTCCCCCACATTGAATACCAACCTTCTCCACAAATGAAACCTTCTGATAATCTGAAAAGTACAAGTAATATTACTACGTCCATTTTTAAATTGACGCGGAAGCAGCTCAACATCTTGAAAGACAAGTCTAAGAAAGATGGCGGGAATAATATTAATACAATCAACTATAGCTCATTTGAGATGTTGGCAGGTCATATCTGGAGATGTGCTTGCAAGGCACGTAAACTTCCGGATGATCAAGACACCAAACTACTTATTGCCACCGATGCACGGTCCAGATTGCAACCCCCACTCCCACCTTATTTCTTTGGCAATGCTGTTTTCAGAACCACACCAATTGCTGTTGCAGGGGATCTCCAATCGAAGCCAACATGGTATGCTACAAGCTTTGTTCATGATGCTTTGGTGCGGATGGACGATGATTATTTTAGATCAGTCCTTGACTATCTTGAGCTTCATCATCCTTGTCTTTCTGAACTTATTACGGGGCCTCCGTCGATTTGTTGCCCAAATCTTCGCATAAACAGTTGGGCTAGGATGCCAATTCATGATGCCGATTTTGGGTGGGGTCGACCCATTTTCATGGGGCCTGGTGCAATTCCATTTGACGGGATGTCTTTCTTGTTACCAAGTGCAACAAATGATGGGAGTTTATCACTGGTCATTTCTCTGAAATCCGAGGACATGAAATCATTTTCCACGTTGTTGTATGACATATAA

Protein Analysis

444

Amino Acids

49.07

Weight (kDa)

6.21

Isoelectric Point (pI)

45.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 791
AccI GTMKAC 1 cut(s) 1183
AccII CGCG 2 cut(s) 480, 709
AccIII TCCGGA 1 cut(s) 841
AciI CCGC 9 cut(s) 5, 281, 305, 444, 478, 560, 709, 753, 1021
AclWI GGATC 3 cut(s) 364, 480, 972
AcoI YGGCCR 2 cut(s) 225, 256
AdeI CACNNNGTG 1 cut(s) 461
AfaI GTAC 2 cut(s) 434, 673
AfiI CCNNNNNNNGG 6 cut(s) 69, 199, 227, 882, 1173, 1220
AflIII ACRYGT 1 cut(s) 120
AgsI TTSAA 4 cut(s) 238, 439, 626, 730
AhdI GACNNNNNGTC 1 cut(s) 1225
AjiI CACGTC 1 cut(s) 123
AjnI CCWGG 1 cut(s) 1201
AluBI AGCT 6 cut(s) 241, 315, 718, 783, 999, 1066
AluI AGCT 6 cut(s) 241, 315, 718, 783, 999, 1066
Alw21I GWGCWC 2 cut(s) 159, 183
Alw26I GTCTC 2 cut(s) 506, 588
AlwI GGATC 3 cut(s) 364, 480, 972
Ama87I CYCGRG 2 cut(s) 69, 591
Aor13HI TCCGGA 1 cut(s) 841
AoxI GGCC 7 cut(s) 47, 189, 201, 225, 256, 1100, 1199
ApeKI GCWGC 2 cut(s) 312, 715
AseI ATTAAT 1 cut(s) 765
AspLEI GCGC 1 cut(s) 346
AspS9I GGNCC 5 cut(s) 190, 202, 885, 1100, 1199
AsuHPI GGTGA 7 cut(s) 25, 31, 55, 164, 347, 467, 551
AvaI CYCGRG 2 cut(s) 69, 591
AvaII GGWCC 1 cut(s) 885
BaeGI GKGCMC 2 cut(s) 213, 592
BanII GRGCYC 1 cut(s) 77
BauI CACGAG 1 cut(s) 534
Bbv12I GWGCWC 2 cut(s) 159, 183
BbvCI CCTCAGC 1 cut(s) 603
BbvI GCAGC 2 cut(s) 324, 727
BccI CCATC 5 cut(s) 10, 482, 743, 1018, 1250
BceAI ACGGC 2 cut(s) 243, 271
BciT130I CCWGG 1 cut(s) 1203
BclI TGATCA 1 cut(s) 847
BcoDI GTCTC 2 cut(s) 506, 588
BfaI CTAG 3 cut(s) 101, 147, 1146
BfmI CTRYAG 1 cut(s) 778
BfuAI ACCTGC 1 cut(s) 791
BisI GCNGC 2 cut(s) 313, 716
BlsI GCNGC 2 cut(s) 314, 717
Bme1390I CCNGG 1 cut(s) 1203
Bme18I GGWCC 1 cut(s) 885
BmeRI GACNNNNNGTC 1 cut(s) 1225
BmeT110I CYCGRG 2 cut(s) 69, 591
BmgBI CACGTC 1 cut(s) 123
BmgT120I GGNCC 5 cut(s) 190, 202, 885, 1100, 1199
BmiI GGNNCC 3 cut(s) 76, 1101, 1200
BmrFI CCNGG 1 cut(s) 1203
BmsI GCATC 4 cut(s) 868, 1000, 1140, 1153
BpmI CTGGAG 1 cut(s) 832
Bpu10I CCTNAGC 1 cut(s) 603
BpuEI CTTGAG 2 cut(s) 167, 1082
BsaAI YACGTR 2 cut(s) 432, 833
BsaI GGTCTC 2 cut(s) 506, 588
BsaJI CCNNGG 5 cut(s) 54, 68, 193, 222, 1290
BsaWI WCCGGW 1 cut(s) 841
BsaXI ACNNNNNCTCC 4 cut(s) 888, 918, 1087, 1117
Bsc4I CCNNNNNNNGG 6 cut(s) 69, 199, 227, 882, 1173, 1220
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 2 cut(s) 126, 1275
Bse3DI GCAATG 2 cut(s) 283, 931
BseAI TCCGGA 1 cut(s) 841
BseBI CCWGG 1 cut(s) 1203
BseDI CCNNGG 5 cut(s) 54, 68, 193, 222, 1290
BseGI GGATG 5 cut(s) 850, 1029, 1072, 1155, 1230
BseLI CCNNNNNNNGG 6 cut(s) 69, 199, 227, 882, 1173, 1220
BseMI GCAATG 2 cut(s) 283, 931
BseMII CTCAG 1 cut(s) 617
BseNI ACTGG 2 cut(s) 126, 1275
BseRI GAGGAG 1 cut(s) 71
BseSI GKGCMC 2 cut(s) 213, 592
BseX3I CGGCCG 1 cut(s) 256
BseXI GCAGC 2 cut(s) 324, 727
Bsh1236I CGCG 2 cut(s) 480, 709
Bsh1285I CGRYCG 2 cut(s) 232, 259
BshFI GGCC 7 cut(s) 49, 191, 203, 227, 258, 1102, 1201
BsiEI CGRYCG 2 cut(s) 232, 259
BsiHKAI GWGCWC 2 cut(s) 159, 183
BsiHKCI CYCGRG 2 cut(s) 69, 591
BsiSI CCGG 2 cut(s) 228, 842
BslI CCNNNNNNNGG 6 cut(s) 69, 199, 227, 882, 1173, 1220
BsmAI GTCTC 2 cut(s) 506, 588
BsmI GAATGC 1 cut(s) 611
BsnI GGCC 7 cut(s) 49, 191, 203, 227, 258, 1102, 1201
Bso31I GGTCTC 2 cut(s) 506, 588
BsoBI CYCGRG 2 cut(s) 69, 591
Bsp1286I GDGCHC 5 cut(s) 77, 159, 183, 213, 592
Bsp13I TCCGGA 1 cut(s) 841
Bsp143I GATC 7 cut(s) 369, 426, 472, 541, 847, 964, 1043
Bsp19I CCATGG 1 cut(s) 222
BspACI CCGC 9 cut(s) 5, 281, 305, 444, 478, 560, 709, 753, 1021
BspANI GGCC 7 cut(s) 49, 191, 203, 227, 258, 1102, 1201
BspCNI CTCAG 1 cut(s) 616
BspEI TCCGGA 1 cut(s) 841
BspFNI CGCG 2 cut(s) 480, 709
BspHI TCATGA 2 cut(s) 1006, 1159
BspLI GGNNCC 3 cut(s) 76, 1101, 1200
BspMI ACCTGC 1 cut(s) 791
BspPI GGATC 3 cut(s) 364, 480, 972
BspTNI GGTCTC 2 cut(s) 506, 588
BsrDI GCAATG 2 cut(s) 283, 931
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 2 cut(s) 126, 1275
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 5 cut(s) 54, 68, 193, 222, 1290
BssMI GATC 7 cut(s) 369, 426, 472, 541, 847, 964, 1043
BssSI CACGAG 1 cut(s) 534
BssT1I CCWWGG 1 cut(s) 222
Bst2BI CACGAG 1 cut(s) 534
Bst2UI CCWGG 1 cut(s) 1203
Bst4CI ACNGT 2 cut(s) 885, 1139
BstBAI YACGTR 2 cut(s) 432, 833
BstC8I GCNNGC 4 cut(s) 51, 189, 609, 823
BstDEI CTNAG 2 cut(s) 603, 741
BstDSI CCRYGG 1 cut(s) 222
BstENI CCTNNNNNAGG 1 cut(s) 197
BstF5I GGATG 5 cut(s) 850, 1029, 1072, 1155, 1230
BstFNI CGCG 2 cut(s) 480, 709
BstHHI GCGC 1 cut(s) 346
BstKTI GATC 7 cut(s) 372, 429, 475, 544, 850, 967, 1046
BstMAI GTCTC 2 cut(s) 506, 588
BstMBI GATC 7 cut(s) 369, 426, 472, 541, 847, 964, 1043
BstMCI CGRYCG 2 cut(s) 232, 259
BstMWI GCNNNNNNNGC 3 cut(s) 715, 827, 878
BstNI CCWGG 1 cut(s) 1203
BstSCI CCNGG 1 cut(s) 1201
BstSFI CTRYAG 1 cut(s) 778
BstSLI GKGCMC 2 cut(s) 213, 592
BstUI CGCG 2 cut(s) 480, 709
BstV1I GCAGC 2 cut(s) 324, 727
BstX2I RGATCY 1 cut(s) 964
BstXI CCANNNNNNTGG 1 cut(s) 1195
BstYI RGATCY 1 cut(s) 964
BstZI CGGCCG 1 cut(s) 256
BsuRI GGCC 7 cut(s) 49, 191, 203, 227, 258, 1102, 1201
BtgI CCRYGG 1 cut(s) 222
BtrI CACGTC 1 cut(s) 123
BtsCI GGATG 5 cut(s) 850, 1029, 1072, 1155, 1230
BtsIMutI CAGTG 3 cut(s) 133, 365, 1268
BveI ACCTGC 1 cut(s) 791
Cac8I GCNNGC 4 cut(s) 51, 189, 609, 823
CciI TCATGA 2 cut(s) 1006, 1159
CfoI GCGC 1 cut(s) 346
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 5 cut(s) 190, 202, 885, 1100, 1199
CseI GACGC 1 cut(s) 715
Csp6I GTAC 2 cut(s) 433, 672
CspCI CAANNNNNGTGG 6 cut(s) 130, 165, 427, 462, 931, 966
CviAII CATG 9 cut(s) 223, 469, 519, 568, 984, 1007, 1160, 1195, 1297
CviQI GTAC 2 cut(s) 433, 672
DdeI CTNAG 2 cut(s) 603, 741
DpnI GATC 7 cut(s) 371, 428, 474, 543, 849, 966, 1045
DpnII GATC 7 cut(s) 369, 426, 472, 541, 847, 964, 1043
DraI TTTAAA 1 cut(s) 700
DraIII CACNNNGTG 1 cut(s) 461
DriI GACNNNNNGTC 1 cut(s) 1225
EaeI YGGCCR 2 cut(s) 225, 256
EagI CGGCCG 1 cut(s) 256
Eam1105I GACNNNNNGTC 1 cut(s) 1225
EciI GGCGGA 1 cut(s) 20
EclXI CGGCCG 1 cut(s) 256
Eco130I CCWWGG 1 cut(s) 222
Eco24I GRGCYC 1 cut(s) 77
Eco31I GGTCTC 2 cut(s) 506, 588
Eco32I GATATC 1 cut(s) 399
Eco47I GGWCC 1 cut(s) 885
Eco52I CGGCCG 1 cut(s) 256
Eco88I CYCGRG 2 cut(s) 69, 591
EcoNI CCTNNNNNAGG 1 cut(s) 197
EcoO109I RGGNCCY 4 cut(s) 190, 202, 1100, 1199
EcoRII CCWGG 1 cut(s) 1201
EcoRV GATATC 1 cut(s) 399
EcoT14I CCWWGG 1 cut(s) 222
EcoT22I ATGCAT 1 cut(s) 520
EcoT38I GRGCYC 1 cut(s) 77
ErhI CCWWGG 1 cut(s) 222
FaeI CATG 9 cut(s) 226, 472, 522, 571, 987, 1010, 1163, 1198, 1300
FatI CATG 9 cut(s) 222, 468, 518, 567, 983, 1006, 1159, 1194, 1296
FauI CCCGC 1 cut(s) 746
FbaI TGATCA 1 cut(s) 847
FblI GTMKAC 1 cut(s) 1183
Fnu4HI GCNGC 2 cut(s) 313, 716
FokI GGATG 5 cut(s) 857, 1036, 1059, 1162, 1237
FriOI GRGCYC 1 cut(s) 77
Fsp4HI GCNGC 2 cut(s) 313, 716
FspBI CTAG 3 cut(s) 101, 147, 1146
GlaI GCGC 1 cut(s) 345
GluI GCNGC 2 cut(s) 313, 716
GsuI CTGGAG 1 cut(s) 832
HaeIII GGCC 7 cut(s) 49, 191, 203, 227, 258, 1102, 1201
HapII CCGG 2 cut(s) 228, 842
HgaI GACGC 1 cut(s) 715
HhaI GCGC 1 cut(s) 346
Hin1II CATG 9 cut(s) 226, 472, 522, 571, 987, 1010, 1163, 1198, 1300
Hin6I GCGC 1 cut(s) 344
HinP1I GCGC 1 cut(s) 344
HincII GTYRAC 2 cut(s) 36, 1184
HindII GTYRAC 2 cut(s) 36, 1184
HindIII AAGCTT 1 cut(s) 997
HinfI GANTC 2 cut(s) 32, 59
HpaII CCGG 2 cut(s) 228, 842
HphI GGTGA 7 cut(s) 25, 31, 55, 164, 347, 467, 551
Hpy166II GTNNAC 5 cut(s) 36, 63, 133, 836, 1184
Hpy188I TCNGA 8 cut(s) 97, 526, 658, 666, 938, 1087, 1284, 1291
Hpy8I GTNNAC 5 cut(s) 36, 63, 133, 836, 1184
Hpy99I CGWCG 1 cut(s) 1111
HpyAV CCTTC 5 cut(s) 4, 223, 574, 645, 663
HpyCH4III ACNGT 2 cut(s) 885, 1139
HpyCH4IV ACGT 5 cut(s) 122, 431, 689, 832, 1313
HpyF10VI GCNNNNNNNGC 3 cut(s) 715, 827, 878
HpyF3I CTNAG 2 cut(s) 603, 741
HpySE526I ACGT 5 cut(s) 122, 431, 689, 832, 1313
Hsp92II CATG 9 cut(s) 226, 472, 522, 571, 987, 1010, 1163, 1198, 1300
HspAI GCGC 1 cut(s) 344
Kpn2I TCCGGA 1 cut(s) 841
Ksp22I TGATCA 1 cut(s) 847
Kzo9I GATC 7 cut(s) 369, 426, 472, 541, 847, 964, 1043
LmnI GCTCC 1 cut(s) 80
Lsp1109I GCAGC 2 cut(s) 324, 727
LweI GCATC 4 cut(s) 868, 1000, 1140, 1153
MaeI CTAG 3 cut(s) 101, 147, 1146
MaeII ACGT 5 cut(s) 122, 431, 689, 832, 1313
MaeIII GTNAC 3 cut(s) 420, 453, 1236
MalI GATC 7 cut(s) 371, 428, 474, 543, 849, 966, 1045
MboI GATC 7 cut(s) 369, 426, 472, 541, 847, 964, 1043
MboII GAAGA 1 cut(s) 1118
MfeI CAATTG 2 cut(s) 378, 948
MflI RGATCY 1 cut(s) 964
MhlI GDGCHC 5 cut(s) 77, 159, 183, 213, 592
MluCI AATT 7 cut(s) 91, 378, 411, 701, 948, 1155, 1209
MlyI GAGTC 2 cut(s) 41, 68
MnlI CCTC 9 cut(s) 39, 49, 78, 203, 277, 412, 612, 1113, 1285
Mph1103I ATGCAT 1 cut(s) 520
MroI TCCGGA 1 cut(s) 841
MseI TTAA 3 cut(s) 555, 699, 765
MslI CAYNNNNRTG 1 cut(s) 1193
MspI CCGG 2 cut(s) 228, 842
MspR9I CCNGG 1 cut(s) 1203
MunI CAATTG 2 cut(s) 378, 948
Mva1269I GAATGC 1 cut(s) 611
MvaI CCWGG 1 cut(s) 1203
MvnI CGCG 2 cut(s) 480, 709
MwoI GCNNNNNNNGC 3 cut(s) 715, 827, 878
NcoI CCATGG 1 cut(s) 222
NdeII GATC 7 cut(s) 369, 426, 472, 541, 847, 964, 1043
NlaIII CATG 9 cut(s) 226, 472, 522, 571, 987, 1010, 1163, 1198, 1300
NlaIV GGNNCC 3 cut(s) 76, 1101, 1200
NmeAIII GCCGAG 2 cut(s) 79, 174
NmuCI GTSAC 1 cut(s) 453
NsiI ATGCAT 1 cut(s) 520
PagI TCATGA 2 cut(s) 1006, 1159
PcsI WCGNNNNNNNCGW 1 cut(s) 1103
PctI GAATGC 1 cut(s) 611
PkrI GCNGC 2 cut(s) 314, 717
PleI GAGTC 2 cut(s) 40, 67
PpsI GAGTC 2 cut(s) 40, 67
Ppu21I YACGTR 2 cut(s) 432, 833
PshBI ATTAAT 1 cut(s) 765
Psp6I CCWGG 1 cut(s) 1201
PspGI CCWGG 1 cut(s) 1201
PspN4I GGNNCC 3 cut(s) 76, 1101, 1200
PspPI GGNCC 5 cut(s) 190, 202, 885, 1100, 1199
PsuI RGATCY 1 cut(s) 964
RsaI GTAC 2 cut(s) 434, 673
RsaNI GTAC 2 cut(s) 433, 672
RseI CAYNNNNRTG 1 cut(s) 1193
SalI GTCGAC 1 cut(s) 1182
SaqAI TTAA 3 cut(s) 555, 699, 765
SatI GCNGC 2 cut(s) 313, 716
Sau3AI GATC 7 cut(s) 369, 426, 472, 541, 847, 964, 1043
Sau96I GGNCC 5 cut(s) 190, 202, 885, 1100, 1199
SchI GAGTC 2 cut(s) 41, 68
ScrFI CCNGG 1 cut(s) 1203
SduI GDGCHC 5 cut(s) 77, 159, 183, 213, 592
SfaNI GCATC 4 cut(s) 868, 1000, 1140, 1153
SfcI CTRYAG 1 cut(s) 778
SinI GGWCC 1 cut(s) 885
SmiMI CAYNNNNRTG 1 cut(s) 1193
SmlI CTYRAG 2 cut(s) 182, 1061
SmoI CTYRAG 2 cut(s) 182, 1061
Sse9I AATT 7 cut(s) 91, 378, 411, 701, 948, 1155, 1209
SsiI CCGC 9 cut(s) 5, 281, 305, 444, 478, 560, 709, 753, 1021
SspI AATATT 3 cut(s) 553, 682, 763
SspMI CTAG 3 cut(s) 101, 147, 1146
StyD4I CCNGG 1 cut(s) 1201
StyI CCWWGG 1 cut(s) 222
TaaI ACNGT 2 cut(s) 885, 1139
TaiI ACGT 5 cut(s) 125, 434, 692, 835, 1316
TaqI TCGA 3 cut(s) 974, 1109, 1183
TasI AATT 7 cut(s) 91, 378, 411, 701, 948, 1155, 1209
TatI WGTACW 1 cut(s) 671
Tru1I TTAA 3 cut(s) 555, 699, 765
Tru9I TTAA 3 cut(s) 555, 699, 765
TscAI CASTG 3 cut(s) 133, 372, 1275
TseFI GTSAC 1 cut(s) 453
TseI GCWGC 2 cut(s) 312, 715
Tsp45I GTSAC 1 cut(s) 453
TspDTI ATGAA 7 cut(s) 556, 662, 995, 1058, 1148, 1183, 1313
TspGWI ACGGA 1 cut(s) 1095
TspRI CASTG 3 cut(s) 133, 372, 1275
VpaK11BI GGWCC 1 cut(s) 885
VspI ATTAAT 1 cut(s) 765
XagI CCTNNNNNAGG 1 cut(s) 197
XmiI GTMKAC 1 cut(s) 1183
XspI CTAG 3 cut(s) 101, 147, 1146
Zsp2I ATGCAT 1 cut(s) 520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.