Prupe.3G123900_v2.0.a1

Protein of unknown function (DUF667)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
11114232 .. 11116705
2474 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G123900.2_v2.0.a1.CDS.3

Sequence Viewer

Length: 261 bp
ATGTTCAAGAACACATTTCAATCCGGATTTCTGTCAATTCTATACAGCCTTGGGAGCAAACCGTTGCAGATTTGGGATAAAGAAGGACTCGGTTTTGGCTTAACAAAATTTGTTGATGACCATATTAAAAGACCACAGGATGAAGACATACAATCCAATGTCCTTGAGATTGGTATGAACATCCAGTCCACATACATTACTTGCCCAGCAGACCCATCAGCTACACTTGGTATAAAACTTCCATTCCTGGATATGTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

9.64

Weight (kDa)

4.79

Isoelectric Point (pI)

57.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022501)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 23
AcsI RAATTY 1 cut(s) 107
AgsI TTSAA 2 cut(s) 7, 20
AjnI CCWGG 1 cut(s) 246
AloI GAACNNNNNNTCC 2 cut(s) 170, 202
AluBI AGCT 1 cut(s) 221
AluI AGCT 1 cut(s) 221
Aor13HI TCCGGA 1 cut(s) 23
ApoI RAATTY 1 cut(s) 107
BbsI GAAGAC 1 cut(s) 150
BccI CCATC 1 cut(s) 223
BciT130I CCWGG 1 cut(s) 248
Bme1390I CCNGG 1 cut(s) 248
BmrFI CCNGG 1 cut(s) 248
BpiI GAAGAC 1 cut(s) 150
BpuEI CTTGAG 1 cut(s) 185
BsaJI CCNNGG 1 cut(s) 49
BsaWI WCCGGW 1 cut(s) 23
Bse1I ACTGG 1 cut(s) 184
BseAI TCCGGA 1 cut(s) 23
BseBI CCWGG 1 cut(s) 248
BseDI CCNNGG 1 cut(s) 49
BseGI GGATG 2 cut(s) 145, 180
BseNI ACTGG 1 cut(s) 184
BseYI CCCAGC 1 cut(s) 205
BsiSI CCGG 1 cut(s) 24
Bsp13I TCCGGA 1 cut(s) 23
BspEI TCCGGA 1 cut(s) 23
BsrI ACTGG 1 cut(s) 184
BssECI CCNNGG 1 cut(s) 49
BssT1I CCWWGG 1 cut(s) 49
Bst2UI CCWGG 1 cut(s) 248
Bst4CI ACNGT 1 cut(s) 63
BstF5I GGATG 2 cut(s) 145, 180
BstMWI GCNNNNNNNGC 1 cut(s) 54
BstNI CCWGG 1 cut(s) 248
BstSCI CCNGG 1 cut(s) 246
BstV2I GAAGAC 1 cut(s) 150
BtsCI GGATG 2 cut(s) 145, 180
CviJI RGCY 3 cut(s) 48, 99, 221
CviKI_1 RGCY 3 cut(s) 48, 99, 221
Eco130I CCWWGG 1 cut(s) 49
EcoRII CCWGG 1 cut(s) 246
EcoT14I CCWWGG 1 cut(s) 49
ErhI CCWWGG 1 cut(s) 49
FaiI YATR 7 cut(s) 43, 123, 149, 176, 193, 233, 254
FokI GGATG 2 cut(s) 152, 167
GsaI CCCAGC 1 cut(s) 209
HapII CCGG 1 cut(s) 24
HinfI GANTC 1 cut(s) 87
HpaII CCGG 1 cut(s) 24
Hpy166II GTNNAC 1 cut(s) 189
Hpy188III TCNNGA 2 cut(s) 7, 24
Hpy8I GTNNAC 1 cut(s) 189
HpyAV CCTTC 1 cut(s) 77
HpyCH4III ACNGT 1 cut(s) 63
HpyCH4V TGCA 1 cut(s) 67
HpyF10VI GCNNNNNNNGC 1 cut(s) 54
Kpn2I TCCGGA 1 cut(s) 23
LmnI GCTCC 1 cut(s) 54
LpnPI CCDG 5 cut(s) 37, 122, 197, 219, 233
MboII GAAGA 1 cut(s) 155
MluCI AATT 2 cut(s) 36, 107
MlyI GAGTC 1 cut(s) 81
MroI TCCGGA 1 cut(s) 23
MseI TTAA 2 cut(s) 101, 126
MspI CCGG 1 cut(s) 24
MspR9I CCNGG 1 cut(s) 248
MvaI CCWGG 1 cut(s) 248
MwoI GCNNNNNNNGC 1 cut(s) 54
PfoI TCCNGGA 1 cut(s) 246
PleI GAGTC 1 cut(s) 81
PpsI GAGTC 1 cut(s) 81
Psp6I CCWGG 1 cut(s) 246
PspFI CCCAGC 1 cut(s) 205
PspGI CCWGG 1 cut(s) 246
SaqAI TTAA 2 cut(s) 101, 126
SchI GAGTC 1 cut(s) 81
ScrFI CCNGG 1 cut(s) 248
SetI ASST 1 cut(s) 223
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
Sse9I AATT 2 cut(s) 36, 107
StyD4I CCNGG 1 cut(s) 246
StyI CCWWGG 1 cut(s) 49
TaaI ACNGT 1 cut(s) 63
TasI AATT 2 cut(s) 36, 107
Tru1I TTAA 2 cut(s) 101, 126
Tru9I TTAA 2 cut(s) 101, 126
TspDTI ATGAA 2 cut(s) 156, 191
XapI RAATTY 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.