Prupe.3G139200_v2.0.a1

Peroxiredoxin Q

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
14687588 .. 14688871
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G139200.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 414 bp
ATGGCTAAGGAAAAATGGGTGGAGTTGCTCTCATACAGAGAGCTTAAAATTTGGTTCGTAAATAAGCCCTTCGTTAAACTGAGAACACGCGACTCAGCCTCCCTCTCTCTCGTTCGCGATTCCAGCTCTCTCTCTCTCTCGTTTGCATACGCGACTTCGCCACTCCTTCGTTTAACATCGATTGCTCCCAGGCAAGCTTTTGCAAAGAAATACAAACTTCCACACACATTACTTAGCGACGAGGGTAATAAGGTGAGGAAAGAATGGGGAGTGCCATCAGATCTGTTTGGGACATTGCCTGGAAGACAGACTTATGTTCTGGACAAGGATGGGGTGGTTCAACTCATCTACAACAACCAGTTCCAACCTGAGAAGCTTATTGATGAAACTCTCAAATTCCTTCAAAGCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

138

Amino Acids

15.77

Weight (kDa)

9.69

Isoelectric Point (pI)

34.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 90, 117, 152
AcsI RAATTY 2 cut(s) 48, 395
AgsI TTSAA 2 cut(s) 341, 404
AjnI CCWGG 2 cut(s) 188, 298
AluBI AGCT 4 cut(s) 43, 126, 197, 376
AluI AGCT 4 cut(s) 43, 126, 197, 376
ApoI RAATTY 2 cut(s) 48, 395
AsuHPI GGTGA 1 cut(s) 265
BbsI GAAGAC 1 cut(s) 310
BccI CCATC 2 cut(s) 283, 323
BciT130I CCWGG 2 cut(s) 190, 300
BglII AGATCT 1 cut(s) 280
Bme1390I CCNGG 2 cut(s) 190, 300
BmrFI CCNGG 2 cut(s) 190, 300
BpiI GAAGAC 1 cut(s) 310
BplI GAGNNNNNCTC 2 cut(s) 14, 46
Bpu10I CCTNAGC 1 cut(s) 6
Bsa29I ATCGAT 1 cut(s) 179
BsaJI CCNNGG 1 cut(s) 188
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bse1I ACTGG 1 cut(s) 358
Bse3DI GCAATG 1 cut(s) 293
BseBI CCWGG 2 cut(s) 190, 300
BseCI ATCGAT 1 cut(s) 179
BseDI CCNNGG 1 cut(s) 188
BseGI GGATG 1 cut(s) 334
BseMI GCAATG 1 cut(s) 293
BseMII CTCAG 3 cut(s) 71, 108, 360
BseNI ACTGG 1 cut(s) 358
Bsh1236I CGCG 3 cut(s) 90, 117, 152
BshVI ATCGAT 1 cut(s) 179
BslFI GGGAC 1 cut(s) 304
BsmFI GGGAC 1 cut(s) 304
Bsp143I GATC 1 cut(s) 280
Bsp68I TCGCGA 1 cut(s) 117
BspCNI CTCAG 3 cut(s) 72, 107, 361
BspDI ATCGAT 1 cut(s) 179
BspFNI CGCG 3 cut(s) 90, 117, 152
BsrDI GCAATG 1 cut(s) 293
BsrI ACTGG 1 cut(s) 358
BssECI CCNNGG 1 cut(s) 188
BssMI GATC 1 cut(s) 280
Bst2UI CCWGG 2 cut(s) 190, 300
BstC8I GCNNGC 1 cut(s) 195
BstDEI CTNAG 5 cut(s) 6, 80, 94, 233, 369
BstF5I GGATG 1 cut(s) 334
BstFNI CGCG 3 cut(s) 90, 117, 152
BstKTI GATC 1 cut(s) 283
BstMBI GATC 1 cut(s) 280
BstMWI GCNNNNNNNGC 1 cut(s) 123
BstNI CCWGG 2 cut(s) 190, 300
BstSCI CCNGG 2 cut(s) 188, 298
BstUI CGCG 3 cut(s) 90, 117, 152
BstV2I GAAGAC 1 cut(s) 310
BstX2I RGATCY 1 cut(s) 280
BstYI RGATCY 1 cut(s) 280
Bsu15I ATCGAT 1 cut(s) 179
BsuTUI ATCGAT 1 cut(s) 179
BtsCI GGATG 1 cut(s) 334
BtuMI TCGCGA 1 cut(s) 117
Cac8I GCNNGC 1 cut(s) 195
ClaI ATCGAT 1 cut(s) 179
CviJI RGCY 8 cut(s) 5, 43, 67, 98, 126, 197, 376, 408
CviKI_1 RGCY 8 cut(s) 5, 43, 67, 98, 126, 197, 376, 408
DdeI CTNAG 5 cut(s) 6, 80, 94, 233, 369
DpnI GATC 1 cut(s) 282
DpnII GATC 1 cut(s) 280
EcoRII CCWGG 2 cut(s) 188, 298
FaiI YATR 3 cut(s) 34, 148, 315
FalI AAGNNNNNCTT 2 cut(s) 295, 327
FaqI GGGAC 1 cut(s) 304
FokI GGATG 1 cut(s) 341
HindIII AAGCTT 2 cut(s) 195, 374
HinfI GANTC 2 cut(s) 92, 119
HphI GGTGA 1 cut(s) 265
Hpy188I TCNGA 1 cut(s) 280
Hpy188III TCNNGA 2 cut(s) 116, 320
Hpy99I CGWCG 1 cut(s) 242
HpyAV CCTTC 3 cut(s) 79, 176, 410
HpyCH4V TGCA 2 cut(s) 146, 203
HpyF10VI GCNNNNNNNGC 1 cut(s) 123
HpyF3I CTNAG 5 cut(s) 6, 80, 94, 233, 369
Kzo9I GATC 1 cut(s) 280
LmnI GCTCC 1 cut(s) 190
LpnPI CCDG 8 cut(s) 136, 175, 202, 285, 305, 312, 371, 381
MalI GATC 1 cut(s) 282
MboI GATC 1 cut(s) 280
MboII GAAGA 1 cut(s) 315
MflI RGATCY 1 cut(s) 280
MluCI AATT 2 cut(s) 48, 395
MlyI GAGTC 1 cut(s) 86
MmeI TCCRAC 1 cut(s) 388
MnlI CCTC 4 cut(s) 109, 113, 235, 249
MseI TTAA 3 cut(s) 45, 75, 173
MspR9I CCNGG 2 cut(s) 190, 300
MvaI CCWGG 2 cut(s) 190, 300
MvnI CGCG 3 cut(s) 90, 117, 152
MwoI GCNNNNNNNGC 1 cut(s) 123
NdeII GATC 1 cut(s) 280
NruI TCGCGA 1 cut(s) 117
PfeI GAWTC 1 cut(s) 119
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
Psp6I CCWGG 2 cut(s) 188, 298
PspGI CCWGG 2 cut(s) 188, 298
PsuI RGATCY 1 cut(s) 280
RruI TCGCGA 1 cut(s) 117
SaqAI TTAA 3 cut(s) 45, 75, 173
Sau3AI GATC 1 cut(s) 280
SchI GAGTC 1 cut(s) 86
ScrFI CCNGG 2 cut(s) 190, 300
SetI ASST 6 cut(s) 45, 128, 199, 255, 370, 378
Sse9I AATT 2 cut(s) 48, 395
StyD4I CCNGG 2 cut(s) 188, 298
TaqI TCGA 1 cut(s) 179
TasI AATT 2 cut(s) 48, 395
TfiI GAWTC 1 cut(s) 119
Tru1I TTAA 3 cut(s) 45, 75, 173
Tru9I TTAA 3 cut(s) 45, 75, 173
TspDTI ATGAA 1 cut(s) 399
XapI RAATTY 2 cut(s) 48, 395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.