Prupe.3G161800_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Forward (+)
18083499 .. 18084764
1266 bp
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UTR
Exon/CDS
Intron
Prupe.3G161800.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 165 bp
ATGGTTAAACTTGGCAGGCAAAGGAAGGGCAGAGCTTCATCCTCACTCCTTGCAACAATATATTCTTCTTCACAGTCTTTACCCACAATGTACCAAACTGGTATTCGATGTCCCCACCACAGTTGTCTGCTTATGCACCAATCCTTAATATTTGATAGCCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

55

Amino Acids

6.05

Weight (kDa)

10.05

Isoelectric Point (pI)

81.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 92
AjuI GAANNNNNNNTTGG 2 cut(s) 87, 119
AluBI AGCT 1 cut(s) 35
AluI AGCT 1 cut(s) 35
Bse1I ACTGG 2 cut(s) 103, 160
BseGI GGATG 1 cut(s) 38
BseNI ACTGG 2 cut(s) 103, 160
BslFI GGGAC 1 cut(s) 96
BsmFI GGGAC 1 cut(s) 96
BsrI ACTGG 2 cut(s) 103, 160
Bst4CI ACNGT 2 cut(s) 75, 122
BstC8I GCNNGC 1 cut(s) 17
BstF5I GGATG 1 cut(s) 38
BtsCI GGATG 1 cut(s) 38
Cac8I GCNNGC 1 cut(s) 17
Csp6I GTAC 1 cut(s) 91
CspCI CAANNNNNGTGG 2 cut(s) 104, 139
CviJI RGCY 2 cut(s) 35, 159
CviKI_1 RGCY 2 cut(s) 35, 159
CviQI GTAC 1 cut(s) 91
FaiI YATR 2 cut(s) 61, 134
FaqI GGGAC 1 cut(s) 96
FokI GGATG 1 cut(s) 25
HpyAV CCTTC 1 cut(s) 19
HpyCH4III ACNGT 2 cut(s) 75, 122
HpyCH4V TGCA 2 cut(s) 53, 136
LpnPI CCDG 1 cut(s) 84
MboII GAAGA 2 cut(s) 57, 60
MnlI CCTC 1 cut(s) 52
MseI TTAA 2 cut(s) 6, 146
RsaI GTAC 1 cut(s) 92
RsaNI GTAC 1 cut(s) 91
SaqAI TTAA 2 cut(s) 6, 146
SetI ASST 1 cut(s) 37
SgeI CNNG 4 cut(s) 23, 28, 62, 111
SspI AATATT 1 cut(s) 150
TaaI ACNGT 2 cut(s) 75, 122
TaqI TCGA 1 cut(s) 106
Tru1I TTAA 2 cut(s) 6, 146
Tru9I TTAA 2 cut(s) 6, 146
TspDTI ATGAA 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.