Prupe.3G167700_v2.0.a1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
18666279 .. 18670695
4417 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G167700.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 1260 bp
ATGCATCTGTCGTTATATAAGAATCAGTTTTCAAGAGAGATTCCTTCAACTATTGGAAACTGTAGTAAGTTGCAGGAGTTTGGAGTTCTTCTATTAGGGCTTGGAAATTGTAGTACGTTAACACGATTTTCTGCTGTGAGTAGCAATTTAGAAGGGAGTATTCCATCTTCCTTTGGCCATCTGAAGTACCTTACAACTCTGCAGCTACAACGAAATTATTTAACTGGTGAAATATCAATTAGCATATGGAAGCTTCGAAGTCTTAAGCAGATCCTTGTGTTCAATAATAGCCTCACTAGGGAGCTCATCATTGGGGAGTTGCCTGTAGTGGTGATTAAGCTGAAGCAGCTAAAATTTATAAGATTGTTCAACAACCTATTTTTTGGAGTTATACCTCAAAGTTTAGGGATTAACATCAGCTTGTCGCTGAAGTTGATTTTGGGATCCAATCGATTTCAATGCACCATAAGTTCTGATGTTGGAACTTGCTCTTCTCTTTCAAGGTTGAGCCTGTACCAGAATAACCTTATTGGGGTTTTTCCACAGTTTGCAAAAAATCCTACCCTTTCATACATGGACATAGCAGCTAGGCCTCATCATGAAATTATTGGAGAAATCCCATCAAGCTTGGGAAACTGTAACAATCTTACAAGTATCAATTTGTGTTGGAACAAGTTAACAGGAGTTCTACCCCATAAGCTAAGGAATCTTGCAGAACTTCATTCTTTGAATATTTCAAAAAAAACAATTTGTGACAACATTTTCACCGGCGGTATTCCACCTTTCTTTTTGGAGTTTGGAAAGCTTTTAGAGCTAAAACTGGGAGGAAATTTTTCGGAAACAAAGACTTTAAAAGCTCTTGGTTATATGAGTTCATTGATTAAGGTTGATGTTTCAGACAATAACTTCACAGGTGCAGTACCAGAGACCTTGATGAAGCTGTTGAACTCATCCCCATTATCATTTTTGGGCAATCCTTACATATGTGTCAGTTACCTTTCATCATGTGGCTCAACTTGTGCAAGAAACAATACCTTGGGGTCTTCATTACTTGTTGTTTCTATGCTTTATGGACTTGTTTATGTGTTCCTCTTGTGCAAAAAGACCAAGCAGGAATTTGAAGTTGTTACTCAAGAGGGTCCACCTCCCGATTGGCAAGGGCCATTTGGAGGGGAATTCCTTGCGAGAGTACAAAGGGCATGGTCTGGAGCACGAGTCTACGGTAAGATTTCTGAAAGGCAAGGTTTCGATAGGTTCTGA
Functional Annotation

Protein Analysis

420

Amino Acids

46.39

Weight (kDa)

9.35

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 359
AccI GTMKAC 1 cut(s) 1218
AciI CCGC 1 cut(s) 771
AclWI GGATC 3 cut(s) 265, 438, 451
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 4 cut(s) 353, 829, 1115, 1175
AcuI CTGAAG 3 cut(s) 203, 362, 449
AfaI GTAC 5 cut(s) 115, 188, 515, 921, 1191
AfiI CCNNNNNNNGG 3 cut(s) 298, 532, 1169
AflII CTTAAG 1 cut(s) 263
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
Alw21I GWGCWC 2 cut(s) 306, 1213
Alw26I GTCTC 1 cut(s) 920
AlwI GGATC 3 cut(s) 265, 438, 451
AoxI GGCC 3 cut(s) 175, 590, 1160
ApeKI GCWGC 3 cut(s) 202, 346, 584
ApoI RAATTY 4 cut(s) 353, 829, 1115, 1175
Asp700I GAANNNNTTC 1 cut(s) 832
AspS9I GGNCC 2 cut(s) 1139, 1160
AsuHPI GGTGA 3 cut(s) 239, 343, 757
AsuII TTCGAA 1 cut(s) 256
AvaII GGWCC 1 cut(s) 1139
BalI TGGCCA 1 cut(s) 177
BamHI GGATCC 1 cut(s) 443
BanII GRGCYC 1 cut(s) 306
BarI GAAGNNNNNNTAC 2 cut(s) 151, 183
BauI CACGAG 1 cut(s) 1212
BbsI GAAGAC 1 cut(s) 1035
Bbv12I GWGCWC 2 cut(s) 306, 1213
BbvI GCAGC 3 cut(s) 214, 358, 596
BccI CCATC 3 cut(s) 172, 186, 628
BcgI CGANNNNNNTGC 2 cut(s) 441, 475
BcoDI GTCTC 1 cut(s) 920
BfaI CTAG 2 cut(s) 297, 588
BfmI CTRYAG 3 cut(s) 61, 200, 324
BfrI CTTAAG 1 cut(s) 263
BisI GCNGC 3 cut(s) 203, 347, 585
BlsI GCNGC 3 cut(s) 204, 348, 586
Bme18I GGWCC 1 cut(s) 1139
BmgT120I GGNCC 2 cut(s) 1139, 1160
BmiI GGNNCC 2 cut(s) 445, 1140
BmrI ACTGGG 1 cut(s) 830
BmsI GCATC 1 cut(s) 13
BmuI ACTGGG 1 cut(s) 830
BpiI GAAGAC 1 cut(s) 1035
BpmI CTGGAG 1 cut(s) 1227
Bpu10I CCTNAGC 1 cut(s) 701
Bpu14I TTCGAA 1 cut(s) 256
BpuEI CTTGAG 1 cut(s) 1116
Bsa29I ATCGAT 1 cut(s) 451
BsaBI GATNNNNATC 1 cut(s) 413
BsaI GGTCTC 1 cut(s) 920
BsaJI CCNNGG 1 cut(s) 1035
BsaXI ACNNNNNCTCC 2 cut(s) 1200, 1230
Bsc4I CCNNNNNNNGG 3 cut(s) 298, 532, 1169
Bse118I RCCGGY 1 cut(s) 767
Bse1I ACTGG 2 cut(s) 229, 825
Bse8I GATNNNNATC 1 cut(s) 413
BseCI ATCGAT 1 cut(s) 451
BseDI CCNNGG 1 cut(s) 1035
BseGI GGATG 1 cut(s) 950
BseJI GATNNNNATC 1 cut(s) 413
BseLI CCNNNNNNNGG 3 cut(s) 298, 532, 1169
BseNI ACTGG 2 cut(s) 229, 825
BseXI GCAGC 3 cut(s) 214, 358, 596
BsgI GTGCAG 1 cut(s) 936
BshFI GGCC 3 cut(s) 177, 592, 1162
BshVI ATCGAT 1 cut(s) 451
BsiHKAI GWGCWC 2 cut(s) 306, 1213
BsiSI CCGG 1 cut(s) 768
BslI CCNNNNNNNGG 3 cut(s) 298, 532, 1169
BsmAI GTCTC 1 cut(s) 920
BsnI GGCC 3 cut(s) 177, 592, 1162
Bso31I GGTCTC 1 cut(s) 920
Bsp119I TTCGAA 1 cut(s) 256
Bsp1286I GDGCHC 2 cut(s) 306, 1213
Bsp143I GATC 2 cut(s) 270, 443
BspACI CCGC 1 cut(s) 771
BspANI GGCC 3 cut(s) 177, 592, 1162
BspDI ATCGAT 1 cut(s) 451
BspHI TCATGA 1 cut(s) 598
BspLI GGNNCC 2 cut(s) 445, 1140
BspMAI CTGCAG 1 cut(s) 204
BspPI GGATC 3 cut(s) 265, 438, 451
BspQI GCTCTTC 1 cut(s) 496
BspT104I TTCGAA 1 cut(s) 256
BspTI CTTAAG 1 cut(s) 263
BspTNI GGTCTC 1 cut(s) 920
BsrFI RCCGGY 1 cut(s) 767
BsrI ACTGG 2 cut(s) 229, 825
BssAI RCCGGY 1 cut(s) 767
BssECI CCNNGG 1 cut(s) 1035
BssMI GATC 2 cut(s) 270, 443
BssSI CACGAG 1 cut(s) 1212
BssT1I CCWWGG 1 cut(s) 1035
Bst2BI CACGAG 1 cut(s) 1212
Bst4CI ACNGT 4 cut(s) 62, 546, 638, 1223
Bst6I CTCTTC 1 cut(s) 496
BstAFI CTTAAG 1 cut(s) 263
BstBI TTCGAA 1 cut(s) 256
BstDEI CTNAG 1 cut(s) 701
BstF5I GGATG 1 cut(s) 950
BstKTI GATC 2 cut(s) 273, 446
BstMAI GTCTC 1 cut(s) 920
BstMBI GATC 2 cut(s) 270, 443
BstMWI GCNNNNNNNGC 2 cut(s) 346, 811
BstSFI CTRYAG 3 cut(s) 61, 200, 324
BstV1I GCAGC 3 cut(s) 214, 358, 596
BstV2I GAAGAC 1 cut(s) 1035
BstX2I RGATCY 2 cut(s) 270, 443
BstYI RGATCY 2 cut(s) 270, 443
Bsu15I ATCGAT 1 cut(s) 451
BsuRI GGCC 3 cut(s) 177, 592, 1162
BsuTUI ATCGAT 1 cut(s) 451
BtsCI GGATG 1 cut(s) 950
CciI TCATGA 1 cut(s) 598
Cfr10I RCCGGY 1 cut(s) 767
Cfr13I GGNCC 2 cut(s) 1139, 1160
ClaI ATCGAT 1 cut(s) 451
Csp6I GTAC 5 cut(s) 114, 187, 514, 920, 1190
CviAII CATG 4 cut(s) 574, 599, 1005, 1200
CviQI GTAC 5 cut(s) 114, 187, 514, 920, 1190
DdeI CTNAG 1 cut(s) 701
DpnI GATC 2 cut(s) 272, 445
DpnII GATC 2 cut(s) 270, 443
DraI TTTAAA 1 cut(s) 852
EaeI YGGCCR 1 cut(s) 175
Eam1104I CTCTTC 1 cut(s) 496
EarI CTCTTC 1 cut(s) 496
Ecl136II GAGCTC 1 cut(s) 304
Eco130I CCWWGG 1 cut(s) 1035
Eco147I AGGCCT 1 cut(s) 592
Eco24I GRGCYC 1 cut(s) 306
Eco31I GGTCTC 1 cut(s) 920
Eco47I GGWCC 1 cut(s) 1139
Eco53kI GAGCTC 1 cut(s) 304
Eco57I CTGAAG 3 cut(s) 203, 362, 449
EcoICRI GAGCTC 1 cut(s) 304
EcoRI GAATTC 1 cut(s) 1175
EcoT14I CCWWGG 1 cut(s) 1035
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 306
ErhI CCWWGG 1 cut(s) 1035
FaeI CATG 4 cut(s) 577, 602, 1008, 1203
FatI CATG 4 cut(s) 573, 598, 1004, 1199
FauNDI CATATG 2 cut(s) 245, 983
FblI GTMKAC 1 cut(s) 1218
Fnu4HI GCNGC 3 cut(s) 203, 347, 585
FokI GGATG 1 cut(s) 937
FriOI GRGCYC 1 cut(s) 306
Fsp4HI GCNGC 3 cut(s) 203, 347, 585
FspBI CTAG 2 cut(s) 297, 588
GluI GCNGC 3 cut(s) 203, 347, 585
GsuI CTGGAG 1 cut(s) 1227
HaeIII GGCC 3 cut(s) 177, 592, 1162
HapII CCGG 1 cut(s) 768
Hin1II CATG 4 cut(s) 577, 602, 1008, 1203
HincII GTYRAC 2 cut(s) 120, 678
HindII GTYRAC 2 cut(s) 120, 678
HindIII AAGCTT 3 cut(s) 251, 625, 803
HinfI GANTC 4 cut(s) 22, 40, 706, 1215
HpaI GTTAAC 2 cut(s) 120, 678
HpaII CCGG 1 cut(s) 768
HphI GGTGA 3 cut(s) 239, 343, 757
Hpy166II GTNNAC 4 cut(s) 120, 678, 1142, 1219
Hpy188I TCNGA 6 cut(s) 183, 475, 838, 898, 1234, 1259
Hpy188III TCNNGA 5 cut(s) 33, 599, 1133, 1148, 1206
Hpy8I GTNNAC 4 cut(s) 120, 678, 1142, 1219
HpyAV CCTTC 2 cut(s) 54, 146
HpyCH4III ACNGT 4 cut(s) 62, 546, 638, 1223
HpyCH4IV ACGT 1 cut(s) 116
HpyCH4V TGCA 9 cut(s) 4, 73, 202, 462, 551, 713, 917, 1022, 1098
HpyF10VI GCNNNNNNNGC 2 cut(s) 346, 811
HpyF3I CTNAG 1 cut(s) 701
HpySE526I ACGT 1 cut(s) 116
Hsp92II CATG 4 cut(s) 577, 602, 1008, 1203
KspAI GTTAAC 2 cut(s) 120, 678
Kzo9I GATC 2 cut(s) 270, 443
LguI GCTCTTC 1 cut(s) 496
LmnI GCTCC 2 cut(s) 301, 1208
Lsp1109I GCAGC 3 cut(s) 214, 358, 596
LweI GCATC 1 cut(s) 13
MaeI CTAG 2 cut(s) 297, 588
MaeII ACGT 1 cut(s) 116
MaeIII GTNAC 4 cut(s) 638, 752, 992, 1126
MalI GATC 2 cut(s) 272, 445
MboI GATC 2 cut(s) 270, 443
MboII GAAGA 4 cut(s) 80, 159, 483, 1035
MflI RGATCY 2 cut(s) 270, 443
MhlI GDGCHC 2 cut(s) 306, 1213
MlsI TGGCCA 1 cut(s) 177
MluNI TGGCCA 1 cut(s) 177
MlyI GAGTC 1 cut(s) 1224
MmeI TCCRAC 2 cut(s) 460, 647
MnlI CCTC 8 cut(s) 302, 405, 603, 818, 1100, 1129, 1155, 1163
Mox20I TGGCCA 1 cut(s) 177
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 832
MscI TGGCCA 1 cut(s) 177
MseI TTAA 8 cut(s) 119, 221, 264, 336, 411, 677, 851, 882
Msp20I TGGCCA 1 cut(s) 177
MspCI CTTAAG 1 cut(s) 263
MspI CCGG 1 cut(s) 768
MwoI GCNNNNNNNGC 2 cut(s) 346, 811
NdeI CATATG 2 cut(s) 245, 983
NdeII GATC 2 cut(s) 270, 443
NlaIII CATG 4 cut(s) 577, 602, 1008, 1203
NlaIV GGNNCC 2 cut(s) 445, 1140
NmuCI GTSAC 1 cut(s) 752
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 256
PagI TCATGA 1 cut(s) 598
PceI AGGCCT 1 cut(s) 592
PciSI GCTCTTC 1 cut(s) 496
PdmI GAANNNNTTC 1 cut(s) 832
PfeI GAWTC 3 cut(s) 22, 40, 706
PkrI GCNGC 3 cut(s) 204, 348, 586
PleI GAGTC 1 cut(s) 1223
PpsI GAGTC 1 cut(s) 1223
PsiI TTATAA 1 cut(s) 359
Psp124BI GAGCTC 1 cut(s) 306
PspN4I GGNNCC 2 cut(s) 445, 1140
PspPI GGNCC 2 cut(s) 1139, 1160
PstI CTGCAG 1 cut(s) 204
PsuI RGATCY 2 cut(s) 270, 443
RsaI GTAC 5 cut(s) 115, 188, 515, 921, 1191
RsaNI GTAC 5 cut(s) 114, 187, 514, 920, 1190
SacI GAGCTC 1 cut(s) 306
SapI GCTCTTC 1 cut(s) 496
SaqAI TTAA 8 cut(s) 119, 221, 264, 336, 411, 677, 851, 882
SatI GCNGC 3 cut(s) 203, 347, 585
Sau3AI GATC 2 cut(s) 270, 443
Sau96I GGNCC 2 cut(s) 1139, 1160
SchI GAGTC 1 cut(s) 1224
SduI GDGCHC 2 cut(s) 306, 1213
SfaNI GCATC 1 cut(s) 13
SfcI CTRYAG 3 cut(s) 61, 200, 324
SfuI TTCGAA 1 cut(s) 256
SgrAI CRCCGGYG 1 cut(s) 767
SinI GGWCC 1 cut(s) 1139
SmlI CTYRAG 2 cut(s) 263, 1131
SmoI CTYRAG 2 cut(s) 263, 1131
SseBI AGGCCT 1 cut(s) 592
SsiI CCGC 1 cut(s) 771
SspI AATATT 1 cut(s) 733
SspMI CTAG 2 cut(s) 297, 588
SstI GAGCTC 1 cut(s) 306
StuI AGGCCT 1 cut(s) 592
StyI CCWWGG 1 cut(s) 1035
TaaI ACNGT 4 cut(s) 62, 546, 638, 1223
TaiI ACGT 1 cut(s) 119
TaqI TCGA 3 cut(s) 256, 451, 1248
TatI WGTACW 1 cut(s) 1189
TfiI GAWTC 3 cut(s) 22, 40, 706
Tru1I TTAA 8 cut(s) 119, 221, 264, 336, 411, 677, 851, 882
Tru9I TTAA 8 cut(s) 119, 221, 264, 336, 411, 677, 851, 882
TseFI GTSAC 1 cut(s) 752
TseI GCWGC 3 cut(s) 202, 346, 584
Tsp45I GTSAC 1 cut(s) 752
TspDTI ATGAA 7 cut(s) 558, 615, 710, 864, 950, 990, 1035
Vha464I CTTAAG 1 cut(s) 263
VpaK11BI GGWCC 1 cut(s) 1139
XapI RAATTY 4 cut(s) 353, 829, 1115, 1175
XcmI CCANNNNNNNNNTGG 1 cut(s) 1149
XmiI GTMKAC 1 cut(s) 1218
XmnI GAANNNNTTC 1 cut(s) 832
XspI CTAG 2 cut(s) 297, 588
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.