Prupe.3G184000_v2.0.a1

36.4 kDa proline-rich

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
19908954 .. 19910567
1614 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G184000.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 1341 bp
ATGGGGAATTATACCCTGGCTTTGCTCTTAGTCCTCATTGTGAATTTGGGTAGTTTGCTCACTTCTCTTGCTAACTCCTACTGTCCACCACCAACATACCCTCCACACTTGCCACCCAAACAGCCTCCTCATGTAAAGCCACCCTTCATCCCTAAACCACCTAAACACCCACCTCATCCCCCTCATGTAAAGCCTCCCTCTGTTCCCAAACCACCATCAAAACCACCTCTTCCTCCTCATGTAAAGCCTCCCTATGTTCCCAAACCACCATCAAAACCACCCCATCCCCCTCATGTAAAGCCTCCCTATGTTCCCAAGCCACCATCAAAGCCACCTCATCCTCATCCACCCCATGTACCCAAGCCACCTCATGGCCCCAAACCCCCCATTGTATATCCTCCCCATATACCAAAACCTCCTTCTGTCCCCAAACCACCTATTGTGAGACCTCCCTTCATCCCCAAGCCTCCTATTGTCAAACCACCACCCCACCCCAAGCCCCCAATTGTGCACCCACCCTTCATCCCCAAGCCCCCAATTGTGCACCCACCCTTCATCCCTAAACCCCCAATTGTGCACCCACCCTTCATCCCTAAACCCCCAATTGTGCACCCACCCTTCATCCCTAAACCCCCAATTGTGCACCCACCCTTCATCCCCAAGCCCCCAATTGTGCACCCACCCTTCATCCCCAAGCCCCCAATCGTGCACCCACCTTTTATCCCTAAACCCCCAATTGTGCACCCACCCTTCATCCCCAAACCCCCAGTTGTACAACCACCACCACCATATGTACCCAAGCCCCCAGTTGTACAACCCCCACCACCCTATGTACCCAAGCCCCCAGTTGTACCAGTTAAGCCACCACCATCACCACCTGTTGTACCACCAAGCCCACCAACACCAACACCTACCCCAGTTGTACCAGTTAAGCCACCACCATCACCACCTGTTGTACCACCAAGCCCACCAACACCTACACCTACCCCAGTTGTACCAGTTAAGCCTCCTCCACCCACTGAGACACCATGTCCTCCTCCACCACCACCAACACCAGTGCCAACCCCATCACCACCAAAGAACACGTGTCCCATCGACACTCTCAAGTTGGGAGCTTGTGTGGATGTGTTGGGTGGCCTCATTCACATTGGAATTGGCAGCAGTGCCAAGGATGCATGCTGTCCAGTGCTTCAAGGGCTGGTGGACTTGGATGCTGCAATTTGCCTTTGCACCACCATCAAGGCTAAGCTTCTCAACATCAACATCATCATCCCCATCGCTCTTCAGGTTCTGATTGACTGTGGGAAAACTCCACCCTCTGGATTCCAGTGCCCTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

447

Amino Acids

47.36

Weight (kDa)

9.98

Isoelectric Point (pI)

69.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 371, 1319
AcsI RAATTY 1 cut(s) 43
AcuI CTGAAG 1 cut(s) 1268
AcvI CACGTG 1 cut(s) 1086
AfiI CCNNNNNNNGG 2 cut(s) 371, 1319
AflIII ACRYGT 2 cut(s) 1083, 1085
AgsI TTSAA 1 cut(s) 1193
AhdI GACNNNNNGTC 1 cut(s) 1029
AjnI CCWGG 1 cut(s) 15
AjuI GAANNNNNNNTTGG 2 cut(s) 403, 435
AluBI AGCT 2 cut(s) 1115, 1249
AluI AGCT 2 cut(s) 1115, 1249
Alw21I GWGCWC 8 cut(s) 513, 546, 579, 612, 645, 678, 711, 744
Alw26I GTCTC 2 cut(s) 439, 1016
Alw44I GTGCAC 8 cut(s) 509, 542, 575, 608, 641, 674, 707, 740
AlwNI CAGNNNCTG 1 cut(s) 1291
AoxI GGCC 2 cut(s) 373, 1135
ApaLI GTGCAC 8 cut(s) 509, 542, 575, 608, 641, 674, 707, 740
ApeKI GCWGC 2 cut(s) 1158, 1214
ApoI RAATTY 1 cut(s) 43
AspS9I GGNCC 1 cut(s) 374
AsuHPI GGTGA 3 cut(s) 864, 936, 1062
BaeGI GKGCMC 9 cut(s) 513, 546, 579, 612, 645, 678, 711, 744, 1334
BbrPI CACGTG 1 cut(s) 1086
Bbv12I GWGCWC 8 cut(s) 513, 546, 579, 612, 645, 678, 711, 744
BbvI GCAGC 2 cut(s) 1170, 1201
BciT130I CCWGG 1 cut(s) 17
BcoDI GTCTC 2 cut(s) 439, 1016
BisI GCNGC 2 cut(s) 1159, 1215
BlpI GCTNAGC 1 cut(s) 1245
BlsI GCNGC 2 cut(s) 1160, 1216
Bme1390I CCNGG 1 cut(s) 17
BmeRI GACNNNNNGTC 1 cut(s) 1029
BmgT120I GGNCC 1 cut(s) 374
BmiI GGNNCC 1 cut(s) 376
BmrFI CCNGG 1 cut(s) 17
BmrI ACTGGG 5 cut(s) 761, 800, 839, 911, 983
BmsI GCATC 2 cut(s) 1162, 1201
BmuI ACTGGG 5 cut(s) 761, 800, 839, 911, 983
Bpu1102I GCTNAGC 1 cut(s) 1245
BpuEI CTTGAG 1 cut(s) 1088
BsaAI YACGTR 1 cut(s) 1086
BsaI GGTCTC 1 cut(s) 439
BsaJI CCNNGG 2 cut(s) 15, 1167
BsaXI ACNNNNNCTCC 4 cut(s) 85, 115, 1104, 1134
Bsc4I CCNNNNNNNGG 2 cut(s) 371, 1319
BseBI CCWGG 1 cut(s) 17
BseDI CCNNGG 2 cut(s) 15, 1167
BseLI CCNNNNNNNGG 2 cut(s) 371, 1319
BseMII CTCAG 1 cut(s) 1011
BseRI GAGGAG 4 cut(s) 117, 225, 999, 1026
BseSI GKGCMC 9 cut(s) 513, 546, 579, 612, 645, 678, 711, 744, 1334
BseXI GCAGC 2 cut(s) 1170, 1201
BshFI GGCC 2 cut(s) 375, 1137
BsiHKAI GWGCWC 8 cut(s) 513, 546, 579, 612, 645, 678, 711, 744
BslFI GGGAC 2 cut(s) 410, 1074
BslI CCNNNNNNNGG 2 cut(s) 371, 1319
BsmAI GTCTC 2 cut(s) 439, 1016
BsmFI GGGAC 2 cut(s) 410, 1074
BsnI GGCC 2 cut(s) 375, 1137
Bso31I GGTCTC 1 cut(s) 439
Bsp1286I GDGCHC 9 cut(s) 513, 546, 579, 612, 645, 678, 711, 744, 1334
Bsp1407I TGTACA 2 cut(s) 772, 811
Bsp1720I GCTNAGC 1 cut(s) 1245
BspANI GGCC 2 cut(s) 375, 1137
BspCNI CTCAG 1 cut(s) 1012
BspLI GGNNCC 1 cut(s) 376
BspQI GCTCTTC 1 cut(s) 1287
BspTNI GGTCTC 1 cut(s) 439
BsrGI TGTACA 2 cut(s) 772, 811
BssECI CCNNGG 2 cut(s) 15, 1167
BssT1I CCWWGG 1 cut(s) 1167
Bst2UI CCWGG 1 cut(s) 17
Bst4CI ACNGT 2 cut(s) 83, 1301
Bst6I CTCTTC 2 cut(s) 234, 1287
BstAUI TGTACA 2 cut(s) 772, 811
BstBAI YACGTR 1 cut(s) 1086
BstC8I GCNNGC 1 cut(s) 1177
BstDEI CTNAG 3 cut(s) 28, 1020, 1245
BstMAI GTCTC 2 cut(s) 439, 1016
BstMWI GCNNNNNNNGC 2 cut(s) 1172, 1195
BstNI CCWGG 1 cut(s) 17
BstNSI RCATGY 1 cut(s) 1179
BstSCI CCNGG 1 cut(s) 15
BstSLI GKGCMC 9 cut(s) 513, 546, 579, 612, 645, 678, 711, 744, 1334
BstV1I GCAGC 2 cut(s) 1170, 1201
BsuRI GGCC 2 cut(s) 375, 1137
BtgZI GCGATG 1 cut(s) 1261
BtsI GCAGTG 1 cut(s) 1168
BtsIMutI CAGTG 5 cut(s) 1017, 1062, 1168, 1191, 1334
Cac8I GCNNGC 1 cut(s) 1177
CaiI CAGNNNCTG 1 cut(s) 1291
Cfr13I GGNCC 1 cut(s) 374
CviAII CATG 8 cut(s) 131, 185, 239, 293, 353, 371, 1029, 1176
DdeI CTNAG 3 cut(s) 28, 1020, 1245
DriI GACNNNNNGTC 1 cut(s) 1029
Eam1104I CTCTTC 2 cut(s) 234, 1287
Eam1105I GACNNNNNGTC 1 cut(s) 1029
EarI CTCTTC 2 cut(s) 234, 1287
Eco130I CCWWGG 1 cut(s) 1167
Eco31I GGTCTC 1 cut(s) 439
Eco57I CTGAAG 1 cut(s) 1268
Eco72I CACGTG 1 cut(s) 1086
EcoRII CCWGG 1 cut(s) 15
EcoT14I CCWWGG 1 cut(s) 1167
EcoT22I ATGCAT 1 cut(s) 1177
ErhI CCWWGG 1 cut(s) 1167
FaeI CATG 8 cut(s) 134, 188, 242, 296, 356, 374, 1032, 1179
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 2 cut(s) 410, 1074
FatI CATG 8 cut(s) 130, 184, 238, 292, 352, 370, 1028, 1175
FauNDI CATATG 1 cut(s) 790
Fnu4HI GCNGC 2 cut(s) 1159, 1215
Fsp4HI GCNGC 2 cut(s) 1159, 1215
GluI GCNGC 2 cut(s) 1159, 1215
HaeIII GGCC 2 cut(s) 375, 1137
Hin1II CATG 8 cut(s) 134, 188, 242, 296, 356, 374, 1032, 1179
HindIII AAGCTT 1 cut(s) 1247
HinfI GANTC 1 cut(s) 1323
HphI GGTGA 3 cut(s) 864, 936, 1062
Hpy188I TCNGA 1 cut(s) 1293
Hpy188III TCNNGA 1 cut(s) 1320
HpyCH4III ACNGT 2 cut(s) 83, 1301
HpyCH4IV ACGT 1 cut(s) 1085
HpyF10VI GCNNNNNNNGC 2 cut(s) 1172, 1195
HpyF3I CTNAG 3 cut(s) 28, 1020, 1245
HpySE526I ACGT 1 cut(s) 1085
Hsp92II CATG 8 cut(s) 134, 188, 242, 296, 356, 374, 1032, 1179
LguI GCTCTTC 1 cut(s) 1287
LmnI GCTCC 1 cut(s) 1112
Lsp1109I GCAGC 2 cut(s) 1170, 1201
LweI GCATC 2 cut(s) 1162, 1201
MaeII ACGT 1 cut(s) 1085
MboII GAAGA 2 cut(s) 221, 1274
MfeI CAATTG 7 cut(s) 504, 537, 570, 603, 636, 669, 735
MhlI GDGCHC 9 cut(s) 513, 546, 579, 612, 645, 678, 711, 744, 1334
Mph1103I ATGCAT 1 cut(s) 1177
MseI TTAA 3 cut(s) 858, 930, 1002
MspR9I CCNGG 1 cut(s) 17
MunI CAATTG 7 cut(s) 504, 537, 570, 603, 636, 669, 735
MvaI CCWGG 1 cut(s) 17
MwoI GCNNNNNNNGC 2 cut(s) 1172, 1195
NdeI CATATG 1 cut(s) 790
NlaIII CATG 8 cut(s) 134, 188, 242, 296, 356, 374, 1032, 1179
NlaIV GGNNCC 1 cut(s) 376
NsiI ATGCAT 1 cut(s) 1177
NspI RCATGY 1 cut(s) 1179
PaeI GCATGC 1 cut(s) 1179
PciSI GCTCTTC 1 cut(s) 1287
PfeI GAWTC 1 cut(s) 1323
PflMI CCANNNNNTGG 2 cut(s) 371, 1319
PkrI GCNGC 2 cut(s) 1160, 1216
PmaCI CACGTG 1 cut(s) 1086
PmlI CACGTG 1 cut(s) 1086
Ppu21I YACGTR 1 cut(s) 1086
Psp6I CCWGG 1 cut(s) 15
PspCI CACGTG 1 cut(s) 1086
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 1 cut(s) 376
PspPI GGNCC 1 cut(s) 374
PstNI CAGNNNCTG 1 cut(s) 1291
SapI GCTCTTC 1 cut(s) 1287
SaqAI TTAA 3 cut(s) 858, 930, 1002
SatI GCNGC 2 cut(s) 1159, 1215
Sau96I GGNCC 1 cut(s) 374
ScrFI CCNGG 1 cut(s) 17
SduI GDGCHC 9 cut(s) 513, 546, 579, 612, 645, 678, 711, 744, 1334
SfaNI GCATC 2 cut(s) 1162, 1201
SmlI CTYRAG 1 cut(s) 1103
SmoI CTYRAG 1 cut(s) 1103
SphI GCATGC 1 cut(s) 1179
StyD4I CCNGG 1 cut(s) 15
StyI CCWWGG 1 cut(s) 1167
TaaI ACNGT 2 cut(s) 83, 1301
TaiI ACGT 1 cut(s) 1088
TaqI TCGA 1 cut(s) 1095
TatI WGTACW 2 cut(s) 772, 811
TfiI GAWTC 1 cut(s) 1323
Tru1I TTAA 3 cut(s) 858, 930, 1002
Tru9I TTAA 3 cut(s) 858, 930, 1002
TscAI CASTG 5 cut(s) 1024, 1062, 1168, 1191, 1334
TseI GCWGC 2 cut(s) 1158, 1214
TspDTI ATGAA 9 cut(s) 136, 445, 511, 544, 577, 610, 643, 676, 742
TspRI CASTG 5 cut(s) 1024, 1062, 1168, 1191, 1334
Van91I CCANNNNNTGG 2 cut(s) 371, 1319
VneI GTGCAC 8 cut(s) 509, 542, 575, 608, 641, 674, 707, 740
XapI RAATTY 1 cut(s) 43
XceI RCATGY 1 cut(s) 1179
Zsp2I ATGCAT 1 cut(s) 1177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.