Prupe.3G215300_v2.0.a1

B-cell receptor-associated protein 31-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
21820438 .. 21822032
1595 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G215300.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 726 bp
ATGGTGCCGCTGCTTTTGATCTTAGGGCAGGGGTTGGTTTATCTGCTCTACGCACTGATTTTCAGCGAAATGGTGCTGATTATGACGTTGCTGTTTGATGCTCCTATGACGAAAACAGCGATCTTGGAGTTGGATAGTTTGAAGCTAAACCAAGGAAAGGGGCTTTTGATTGTGAAGATTGTCACTGGAACTCTGTTTCTGGTTTTAATGGCTAACTTCTACAGTGTCCTCCGCATAACTATGAAGAACCGAACCAACGAGGGCGGTGGGCTAAACCCAACAGAGGAGGTTCTTAAGTCCATGAACATACTCCAAATTTCTCTAATTGGGATTGTACTGTTTCTTGTACTGATGATAGATAGCTTGCACCATTACATAAGAGGACTTCCTTCACTCGTGATGGCCATGGAGGCTGCAAAAACACAAAACCAAAGTTTTCGAAAGGAGAAAACCGAAAGTGTACAGAAGCTTAACACCATGGTACAAGAGAAGGATACATTGAGGACAAAGCTCAAGTATCTGGAATCTGAATGCAAGAGCGAAGCAAACGAGGCAAACAAGGCAAGAGCCGAGGCAGAGGCCCTAAGACAGGAATCTGAAGAATTCTTAAAAGAATATGATCGATTGCTTGCAGACAACCAAAATTTTCGGAACCAGTCGAAATTGGTTGAACAGAGATTCACCAAGCAAAGCATATCACACCCTAATGACAAAAAGAACTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 ko05165 map04141 map05165
Pfam Domains
Protein Families
Bap31

Protein Analysis

242

Amino Acids

27.43

Weight (kDa)

8.82

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AciI CCGC 3 cut(s) 8, 232, 264
AcoI YGGCCR 1 cut(s) 402
AcsI RAATTY 3 cut(s) 315, 602, 643
AcuI CTGAAG 1 cut(s) 618
AfaI GTAC 4 cut(s) 336, 348, 462, 483
AfiI CCNNNNNNNGG 3 cut(s) 157, 283, 589
AflII CTTAAG 1 cut(s) 293
AgsI TTSAA 2 cut(s) 142, 671
AluBI AGCT 4 cut(s) 145, 363, 469, 511
AluI AGCT 4 cut(s) 145, 363, 469, 511
AoxI GGCC 2 cut(s) 402, 579
ApeKI GCWGC 2 cut(s) 10, 413
ApoI RAATTY 3 cut(s) 315, 602, 643
AspS9I GGNCC 1 cut(s) 580
AsuHPI GGTGA 1 cut(s) 673
AsuII TTCGAA 1 cut(s) 439
BalI TGGCCA 1 cut(s) 404
BanI GGYRCC 1 cut(s) 4
BauI CACGAG 1 cut(s) 395
BbvI GCAGC 1 cut(s) 400
BccI CCATC 1 cut(s) 394
BciVI GTATCC 1 cut(s) 487
BfmI CTRYAG 1 cut(s) 220
BfrI CTTAAG 1 cut(s) 293
BfuI GTATCC 1 cut(s) 487
BglI GCCNNNNNGGC 1 cut(s) 410
BisI GCNGC 3 cut(s) 8, 11, 414
BlsI GCNGC 3 cut(s) 9, 12, 415
BmgT120I GGNCC 1 cut(s) 580
BmiI GGNNCC 2 cut(s) 6, 653
BmsI GCATC 1 cut(s) 88
Bpu14I TTCGAA 1 cut(s) 439
BpuEI CTTGAG 1 cut(s) 497
Bsa29I ATCGAT 1 cut(s) 622
BsaJI CCNNGG 4 cut(s) 151, 405, 477, 570
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 283, 589
Bse1I ACTGG 2 cut(s) 190, 655
BseCI ATCGAT 1 cut(s) 622
BseDI CCNNGG 4 cut(s) 151, 405, 477, 570
BseLI CCNNNNNNNGG 3 cut(s) 157, 283, 589
BseNI ACTGG 2 cut(s) 190, 655
BseRI GAGGAG 1 cut(s) 299
BseXI GCAGC 1 cut(s) 400
BshFI GGCC 2 cut(s) 404, 581
BshNI GGYRCC 1 cut(s) 4
BshVI ATCGAT 1 cut(s) 622
BslI CCNNNNNNNGG 3 cut(s) 157, 283, 589
BsmI GAATGC 1 cut(s) 536
BsnI GGCC 2 cut(s) 404, 581
Bsp119I TTCGAA 1 cut(s) 439
Bsp1407I TGTACA 1 cut(s) 460
Bsp143I GATC 3 cut(s) 18, 120, 619
Bsp19I CCATGG 2 cut(s) 405, 477
BspACI CCGC 3 cut(s) 8, 232, 264
BspANI GGCC 2 cut(s) 404, 581
BspDI ATCGAT 1 cut(s) 622
BspLI GGNNCC 2 cut(s) 6, 653
BspT104I TTCGAA 1 cut(s) 439
BspT107I GGYRCC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 293
BsrGI TGTACA 1 cut(s) 460
BsrI ACTGG 2 cut(s) 190, 655
BssECI CCNNGG 4 cut(s) 151, 405, 477, 570
BssMI GATC 3 cut(s) 18, 120, 619
BssSI CACGAG 1 cut(s) 395
BssT1I CCWWGG 3 cut(s) 151, 405, 477
Bst2BI CACGAG 1 cut(s) 395
Bst4CI ACNGT 2 cut(s) 224, 339
BstAFI CTTAAG 1 cut(s) 293
BstAUI TGTACA 1 cut(s) 460
BstBI TTCGAA 1 cut(s) 439
BstC8I GCNNGC 2 cut(s) 365, 630
BstDEI CTNAG 2 cut(s) 22, 584
BstDSI CCRYGG 2 cut(s) 405, 477
BstENI CCTNNNNNAGG 1 cut(s) 587
BstKTI GATC 3 cut(s) 21, 123, 622
BstMBI GATC 3 cut(s) 18, 120, 619
BstMWI GCNNNNNNNGC 3 cut(s) 410, 551, 560
BstSFI CTRYAG 1 cut(s) 220
BstV1I GCAGC 1 cut(s) 400
Bsu15I ATCGAT 1 cut(s) 622
BsuI GTATCC 1 cut(s) 487
BsuRI GGCC 2 cut(s) 404, 581
BsuTUI ATCGAT 1 cut(s) 622
BtgI CCRYGG 2 cut(s) 405, 477
BtsIMutI CAGTG 3 cut(s) 53, 183, 229
Cac8I GCNNGC 2 cut(s) 365, 630
Cfr13I GGNCC 1 cut(s) 580
ClaI ATCGAT 1 cut(s) 622
Csp6I GTAC 4 cut(s) 335, 347, 461, 482
CviAII CATG 3 cut(s) 301, 406, 478
CviQI GTAC 4 cut(s) 335, 347, 461, 482
DdeI CTNAG 2 cut(s) 22, 584
DpnI GATC 3 cut(s) 20, 122, 621
DpnII GATC 3 cut(s) 18, 120, 619
EaeI YGGCCR 1 cut(s) 402
Eco130I CCWWGG 3 cut(s) 151, 405, 477
Eco57I CTGAAG 1 cut(s) 618
EcoNI CCTNNNNNAGG 1 cut(s) 587
EcoO109I RGGNCCY 1 cut(s) 580
EcoRI GAATTC 1 cut(s) 602
EcoT14I CCWWGG 3 cut(s) 151, 405, 477
ErhI CCWWGG 3 cut(s) 151, 405, 477
FaeI CATG 3 cut(s) 304, 409, 481
FatI CATG 3 cut(s) 300, 405, 477
Fnu4HI GCNGC 3 cut(s) 8, 11, 414
Fsp4HI GCNGC 3 cut(s) 8, 11, 414
GluI GCNGC 3 cut(s) 8, 11, 414
HaeIII GGCC 2 cut(s) 404, 581
Hin1II CATG 3 cut(s) 304, 409, 481
HindIII AAGCTT 1 cut(s) 467
HinfI GANTC 3 cut(s) 524, 593, 678
HphI GGTGA 1 cut(s) 673
Hpy166II GTNNAC 1 cut(s) 461
Hpy188I TCNGA 3 cut(s) 529, 598, 651
Hpy188III TCNNGA 2 cut(s) 397, 521
Hpy8I GTNNAC 1 cut(s) 461
HpyAV CCTTC 2 cut(s) 399, 484
HpyCH4III ACNGT 2 cut(s) 224, 339
HpyCH4IV ACGT 1 cut(s) 86
HpyCH4V TGCA 4 cut(s) 367, 416, 534, 632
HpyF10VI GCNNNNNNNGC 3 cut(s) 410, 551, 560
HpyF3I CTNAG 2 cut(s) 22, 584
HpySE526I ACGT 1 cut(s) 86
Hsp92II CATG 3 cut(s) 304, 409, 481
Kzo9I GATC 3 cut(s) 18, 120, 619
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 6 cut(s) 14, 171, 185, 506, 575, 668
Lsp1109I GCAGC 1 cut(s) 400
LweI GCATC 1 cut(s) 88
MaeII ACGT 1 cut(s) 86
MaeIII GTNAC 1 cut(s) 181
MalI GATC 3 cut(s) 20, 122, 621
MboI GATC 3 cut(s) 18, 120, 619
MboII GAAGA 3 cut(s) 187, 256, 611
MlsI TGGCCA 1 cut(s) 404
MluCI AATT 5 cut(s) 315, 324, 602, 643, 662
MluNI TGGCCA 1 cut(s) 404
MmeI TCCRAC 1 cut(s) 111
Mox20I TGGCCA 1 cut(s) 404
MscI TGGCCA 1 cut(s) 404
MseI TTAA 4 cut(s) 206, 294, 471, 608
MslI CAYNNNNRTG 2 cut(s) 239, 705
Msp20I TGGCCA 1 cut(s) 404
MspA1I CMGCKG 1 cut(s) 10
MspCI CTTAAG 1 cut(s) 293
Mva1269I GAATGC 1 cut(s) 536
MwoI GCNNNNNNNGC 3 cut(s) 410, 551, 560
NcoI CCATGG 2 cut(s) 405, 477
NdeII GATC 3 cut(s) 18, 120, 619
NlaIII CATG 3 cut(s) 304, 409, 481
NlaIV GGNNCC 2 cut(s) 6, 653
NmeAIII GCCGAG 1 cut(s) 595
NmuCI GTSAC 1 cut(s) 181
NspV TTCGAA 1 cut(s) 439
PcsI WCGNNNNNNNCGW 1 cut(s) 116
PctI GAATGC 1 cut(s) 536
PfeI GAWTC 3 cut(s) 524, 593, 678
PkrI GCNGC 3 cut(s) 9, 12, 415
PspN4I GGNNCC 2 cut(s) 6, 653
PspPI GGNCC 1 cut(s) 580
RsaI GTAC 4 cut(s) 336, 348, 462, 483
RsaNI GTAC 4 cut(s) 335, 347, 461, 482
RseI CAYNNNNRTG 2 cut(s) 239, 705
SaqAI TTAA 4 cut(s) 206, 294, 471, 608
SatI GCNGC 3 cut(s) 8, 11, 414
Sau3AI GATC 3 cut(s) 18, 120, 619
Sau96I GGNCC 1 cut(s) 580
SetI ASST 6 cut(s) 89, 147, 291, 365, 471, 513
SfaNI GCATC 1 cut(s) 88
SfcI CTRYAG 1 cut(s) 220
SfuI TTCGAA 1 cut(s) 439
SmiMI CAYNNNNRTG 2 cut(s) 239, 705
SmlI CTYRAG 2 cut(s) 293, 512
SmoI CTYRAG 2 cut(s) 293, 512
Sse9I AATT 5 cut(s) 315, 324, 602, 643, 662
SsiI CCGC 3 cut(s) 8, 232, 264
StyI CCWWGG 3 cut(s) 151, 405, 477
TaaI ACNGT 2 cut(s) 224, 339
TaiI ACGT 1 cut(s) 89
TaqI TCGA 3 cut(s) 439, 622, 659
TasI AATT 5 cut(s) 315, 324, 602, 643, 662
TatI WGTACW 3 cut(s) 334, 346, 460
TauI GCSGC 1 cut(s) 10
TfiI GAWTC 3 cut(s) 524, 593, 678
Tru1I TTAA 4 cut(s) 206, 294, 471, 608
Tru9I TTAA 4 cut(s) 206, 294, 471, 608
TscAI CASTG 3 cut(s) 60, 190, 229
TseFI GTSAC 1 cut(s) 181
TseI GCWGC 2 cut(s) 10, 413
Tsp45I GTSAC 1 cut(s) 181
TspDTI ATGAA 2 cut(s) 257, 317
TspRI CASTG 3 cut(s) 60, 190, 229
Vha464I CTTAAG 1 cut(s) 293
XagI CCTNNNNNAGG 1 cut(s) 587
XapI RAATTY 3 cut(s) 315, 602, 643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.