Prupe.3G215400_v2.0.a1

B-cell receptor-associated protein 31-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
21822234 .. 21823572
1339 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G215400.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 657 bp
ATGTTCCAGCTGCTGCTTTGCGCGGCGATCTTGGGCGAAATAGCGCTGATTCTAGCGCTGCTGTTGGAGATCAAACTGGCGGAGCCAGTGACGATAGCGGTAGATCGCTTGAAACGAGGGAGGGGCCCACTCGTTGTGAGGATCATCGCTGGTTCGGTGTTGTTTGTGCTAGTGGCCAGGGTCTACGGTACGATCAACATCATCAAACGAACCACCATGCTCAATCCGAGTGTTCTCATGAACATGTTCCAGATTTCTCTTACCGGATTCTTGCTGTTTCTTTCAGTTATTTTGGATAGATTGCATCATTACACGAGAGAAGTTTCTTTACTCAGGACTGAAATGGAGGCTGCACAAAGAGAGAACCAAACTTTAAAAGAGGAGAAAAATGGAAGAGCCATGGAGCTTAAGATCTTGGGACAAGAGATTGCTAAATTGAGGACAAACATCATGAATACGGAAACTGAATATGAGACGAAAGCAAAGGGGGCAAAGCTGGAAAAAACCAAGGCATATGCCTTGAGAAAGCAATATGAAGGACTCCTTGCGGAAATTGATCGCGTGCAGGAAGACAACCAAATTCTTCGAAGCCAGCTAGAATGGGTGGATCTAAGCTATGATGACAAAACGAAACACGCAAGGAAGCGATTACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 ko05165 map04141 map05165
Pfam Domains
Protein Families
Bap31

Protein Analysis

219

Amino Acids

24.97

Weight (kDa)

9.49

Isoelectric Point (pI)

32.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 183
AccII CGCG 2 cut(s) 23, 561
AciI CCGC 4 cut(s) 23, 80, 98, 548
AclWI GGATC 2 cut(s) 149, 615
AcoI YGGCCR 1 cut(s) 174
AcsI RAATTY 1 cut(s) 579
AfaI GTAC 1 cut(s) 190
AfeI AGCGCT 2 cut(s) 45, 57
AflII CTTAAG 1 cut(s) 407
AflIII ACRYGT 1 cut(s) 243
AgsI TTSAA 1 cut(s) 112
AjnI CCWGG 1 cut(s) 176
AluBI AGCT 5 cut(s) 10, 406, 496, 595, 615
AluI AGCT 5 cut(s) 10, 406, 496, 595, 615
Alw26I GTCTC 1 cut(s) 467
AlwI GGATC 2 cut(s) 149, 615
AlwNI CAGNNNCTG 1 cut(s) 13
Aor51HI AGCGCT 2 cut(s) 45, 57
AoxI GGCC 2 cut(s) 124, 174
ApaI GGGCCC 1 cut(s) 128
ApeKI GCWGC 4 cut(s) 10, 13, 58, 350
ApoI RAATTY 1 cut(s) 579
Asp700I GAANNNNTTC 1 cut(s) 245
AspLEI GCGC 3 cut(s) 23, 46, 58
AspS9I GGNCC 2 cut(s) 124, 125
AsuII TTCGAA 1 cut(s) 586
BaeGI GKGCMC 1 cut(s) 128
BalI TGGCCA 1 cut(s) 176
BanII GRGCYC 1 cut(s) 128
BarI GAAGNNNNNNTAC 2 cut(s) 312, 344
BauI CACGAG 1 cut(s) 313
BbsI GAAGAC 1 cut(s) 576
BbvI GCAGC 2 cut(s) 45, 337
BciT130I CCWGG 1 cut(s) 178
BcoDI GTCTC 1 cut(s) 467
BfaI CTAG 3 cut(s) 53, 170, 596
BfoI RGCGCY 2 cut(s) 47, 59
BfrI CTTAAG 1 cut(s) 407
BglII AGATCT 1 cut(s) 411
BisI GCNGC 5 cut(s) 11, 14, 24, 59, 351
BlsI GCNGC 5 cut(s) 12, 15, 25, 60, 352
Bme1390I CCNGG 1 cut(s) 178
BmgT120I GGNCC 2 cut(s) 124, 125
BmiI GGNNCC 3 cut(s) 84, 125, 126
BmrFI CCNGG 1 cut(s) 178
BmsI GCATC 1 cut(s) 313
BpiI GAAGAC 1 cut(s) 576
Bpu14I TTCGAA 1 cut(s) 586
BpuEI CTTGAG 1 cut(s) 541
BsaBI GATNNNNATC 1 cut(s) 197
BsaJI CCNNGG 3 cut(s) 177, 399, 507
BsaWI WCCGGW 1 cut(s) 263
Bse1I ACTGG 2 cut(s) 81, 86
Bse8I GATNNNNATC 1 cut(s) 197
BseBI CCWGG 1 cut(s) 178
BseDI CCNNGG 3 cut(s) 177, 399, 507
BseJI GATNNNNATC 1 cut(s) 197
BseMII CTCAG 1 cut(s) 346
BseNI ACTGG 2 cut(s) 81, 86
BseRI GAGGAG 1 cut(s) 395
BseSI GKGCMC 1 cut(s) 128
BseXI GCAGC 2 cut(s) 45, 337
BsgI GTGCAG 2 cut(s) 336, 584
Bsh1236I CGCG 2 cut(s) 23, 561
BshFI GGCC 2 cut(s) 126, 176
BsiSI CCGG 1 cut(s) 264
BslFI GGGAC 1 cut(s) 432
BsmAI GTCTC 1 cut(s) 467
BsmBI CGTCTC 1 cut(s) 467
BsmFI GGGAC 1 cut(s) 432
BsnI GGCC 2 cut(s) 126, 176
Bsp119I TTCGAA 1 cut(s) 586
Bsp120I GGGCCC 1 cut(s) 124
Bsp1286I GDGCHC 1 cut(s) 128
Bsp143I GATC 8 cut(s) 27, 69, 103, 141, 192, 411, 556, 607
Bsp19I CCATGG 1 cut(s) 399
BspACI CCGC 4 cut(s) 23, 80, 98, 548
BspANI GGCC 2 cut(s) 126, 176
BspCNI CTCAG 1 cut(s) 345
BspFNI CGCG 2 cut(s) 23, 561
BspHI TCATGA 2 cut(s) 237, 450
BspLI GGNNCC 3 cut(s) 84, 125, 126
BspPI GGATC 2 cut(s) 149, 615
BspQI GCTCTTC 1 cut(s) 388
BspT104I TTCGAA 1 cut(s) 586
BspTI CTTAAG 1 cut(s) 407
BsrI ACTGG 2 cut(s) 81, 86
BssECI CCNNGG 3 cut(s) 177, 399, 507
BssMI GATC 8 cut(s) 27, 69, 103, 141, 192, 411, 556, 607
BssSI CACGAG 1 cut(s) 313
BssT1I CCWWGG 2 cut(s) 399, 507
Bst2BI CACGAG 1 cut(s) 313
Bst2UI CCWGG 1 cut(s) 178
Bst4CI ACNGT 1 cut(s) 188
Bst6I CTCTTC 1 cut(s) 388
BstAFI CTTAAG 1 cut(s) 407
BstBI TTCGAA 1 cut(s) 586
BstC8I GCNNGC 2 cut(s) 563, 593
BstDEI CTNAG 2 cut(s) 332, 611
BstDSI CCRYGG 1 cut(s) 399
BstFNI CGCG 2 cut(s) 23, 561
BstH2I RGCGCY 2 cut(s) 47, 59
BstHHI GCGC 3 cut(s) 23, 46, 58
BstKTI GATC 8 cut(s) 30, 72, 106, 144, 195, 414, 559, 610
BstMAI GTCTC 1 cut(s) 467
BstMBI GATC 8 cut(s) 27, 69, 103, 141, 192, 411, 556, 607
BstMWI GCNNNNNNNGC 1 cut(s) 488
BstNI CCWGG 1 cut(s) 178
BstNSI RCATGY 1 cut(s) 247
BstSCI CCNGG 1 cut(s) 176
BstSLI GKGCMC 1 cut(s) 128
BstUI CGCG 2 cut(s) 23, 561
BstV1I GCAGC 2 cut(s) 45, 337
BstV2I GAAGAC 1 cut(s) 576
BstX2I RGATCY 2 cut(s) 411, 607
BstYI RGATCY 2 cut(s) 411, 607
BsuRI GGCC 2 cut(s) 126, 176
BtgI CCRYGG 1 cut(s) 399
BtgZI GCGATG 1 cut(s) 130
BtsIMutI CAGTG 1 cut(s) 93
Cac8I GCNNGC 2 cut(s) 563, 593
CaiI CAGNNNCTG 1 cut(s) 13
CciI TCATGA 2 cut(s) 237, 450
CfoI GCGC 3 cut(s) 23, 46, 58
Cfr13I GGNCC 2 cut(s) 124, 125
Csp6I GTAC 1 cut(s) 189
CviAII CATG 5 cut(s) 217, 238, 244, 400, 451
CviQI GTAC 1 cut(s) 189
DdeI CTNAG 2 cut(s) 332, 611
DpnI GATC 8 cut(s) 29, 71, 105, 143, 194, 413, 558, 609
DpnII GATC 8 cut(s) 27, 69, 103, 141, 192, 411, 556, 607
DraI TTTAAA 1 cut(s) 375
EaeI YGGCCR 1 cut(s) 174
Eam1104I CTCTTC 1 cut(s) 388
EarI CTCTTC 1 cut(s) 388
EciI GGCGGA 1 cut(s) 95
Eco130I CCWWGG 2 cut(s) 399, 507
Eco24I GRGCYC 1 cut(s) 128
Eco47III AGCGCT 2 cut(s) 45, 57
EcoO109I RGGNCCY 1 cut(s) 124
EcoRII CCWGG 1 cut(s) 176
EcoT14I CCWWGG 2 cut(s) 399, 507
EcoT38I GRGCYC 1 cut(s) 128
ErhI CCWWGG 2 cut(s) 399, 507
Esp3I CGTCTC 1 cut(s) 467
FaeI CATG 5 cut(s) 220, 241, 247, 403, 454
FalI AAGNNNNNCTT 2 cut(s) 528, 560
FaqI GGGAC 1 cut(s) 432
FatI CATG 5 cut(s) 216, 237, 243, 399, 450
FauNDI CATATG 1 cut(s) 514
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 5 cut(s) 11, 14, 24, 59, 351
FriOI GRGCYC 1 cut(s) 128
Fsp4HI GCNGC 5 cut(s) 11, 14, 24, 59, 351
FspBI CTAG 3 cut(s) 53, 170, 596
GlaI GCGC 3 cut(s) 22, 45, 57
GluI GCNGC 5 cut(s) 11, 14, 24, 59, 351
HaeII RGCGCY 2 cut(s) 47, 59
HaeIII GGCC 2 cut(s) 126, 176
HapII CCGG 1 cut(s) 264
HhaI GCGC 3 cut(s) 23, 46, 58
Hin1II CATG 5 cut(s) 220, 241, 247, 403, 454
Hin6I GCGC 3 cut(s) 21, 44, 56
HinP1I GCGC 3 cut(s) 21, 44, 56
HinfI GANTC 3 cut(s) 49, 267, 540
HpaII CCGG 1 cut(s) 264
Hpy166II GTNNAC 1 cut(s) 184
Hpy188I TCNGA 1 cut(s) 228
Hpy188III TCNNGA 4 cut(s) 238, 250, 334, 451
Hpy8I GTNNAC 1 cut(s) 184
HpyAV CCTTC 1 cut(s) 530
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4V TGCA 3 cut(s) 304, 353, 565
HpyF10VI GCNNNNNNNGC 1 cut(s) 488
HpyF3I CTNAG 2 cut(s) 332, 611
Hsp92II CATG 5 cut(s) 220, 241, 247, 403, 454
HspAI GCGC 3 cut(s) 21, 44, 56
Kzo9I GATC 8 cut(s) 27, 69, 103, 141, 192, 411, 556, 607
LguI GCTCTTC 1 cut(s) 388
LmnI GCTCC 2 cut(s) 82, 403
Lsp1109I GCAGC 2 cut(s) 45, 337
LweI GCATC 1 cut(s) 313
MaeI CTAG 3 cut(s) 53, 170, 596
MaeIII GTNAC 1 cut(s) 88
MalI GATC 8 cut(s) 29, 71, 105, 143, 194, 413, 558, 609
MboI GATC 8 cut(s) 27, 69, 103, 141, 192, 411, 556, 607
MboII GAAGA 3 cut(s) 405, 575, 581
MflI RGATCY 2 cut(s) 411, 607
MhlI GDGCHC 1 cut(s) 128
MlsI TGGCCA 1 cut(s) 176
MluCI AATT 3 cut(s) 434, 552, 579
MluNI TGGCCA 1 cut(s) 176
MlyI GAGTC 1 cut(s) 534
MmeI TCCRAC 1 cut(s) 45
MnlI CCTC 6 cut(s) 110, 114, 132, 340, 373, 432
Mox20I TGGCCA 1 cut(s) 176
MroXI GAANNNNTTC 1 cut(s) 245
MscI TGGCCA 1 cut(s) 176
MseI TTAA 2 cut(s) 374, 408
MslI CAYNNNNRTG 1 cut(s) 242
Msp20I TGGCCA 1 cut(s) 176
MspA1I CMGCKG 1 cut(s) 10
MspCI CTTAAG 1 cut(s) 407
MspI CCGG 1 cut(s) 264
MspR9I CCNGG 1 cut(s) 178
MvaI CCWGG 1 cut(s) 178
MvnI CGCG 2 cut(s) 23, 561
MwoI GCNNNNNNNGC 1 cut(s) 488
NcoI CCATGG 1 cut(s) 399
NdeI CATATG 1 cut(s) 514
NdeII GATC 8 cut(s) 27, 69, 103, 141, 192, 411, 556, 607
NlaIII CATG 5 cut(s) 220, 241, 247, 403, 454
NlaIV GGNNCC 3 cut(s) 84, 125, 126
NmuCI GTSAC 1 cut(s) 88
NspI RCATGY 1 cut(s) 247
NspV TTCGAA 1 cut(s) 586
PagI TCATGA 2 cut(s) 237, 450
PciI ACATGT 1 cut(s) 243
PciSI GCTCTTC 1 cut(s) 388
PcsI WCGNNNNNNNCGW 1 cut(s) 112
PdmI GAANNNNTTC 1 cut(s) 245
PfeI GAWTC 2 cut(s) 49, 267
PkrI GCNGC 5 cut(s) 12, 15, 25, 60, 352
PleI GAGTC 1 cut(s) 534
PpsI GAGTC 1 cut(s) 534
PscI ACATGT 1 cut(s) 243
Psp6I CCWGG 1 cut(s) 176
PspGI CCWGG 1 cut(s) 176
PspN4I GGNNCC 3 cut(s) 84, 125, 126
PspOMI GGGCCC 1 cut(s) 124
PspPI GGNCC 2 cut(s) 124, 125
PstNI CAGNNNCTG 1 cut(s) 13
PsuI RGATCY 2 cut(s) 411, 607
PvuII CAGCTG 1 cut(s) 10
RsaI GTAC 1 cut(s) 190
RsaNI GTAC 1 cut(s) 189
RseI CAYNNNNRTG 1 cut(s) 242
SapI GCTCTTC 1 cut(s) 388
SaqAI TTAA 2 cut(s) 374, 408
SatI GCNGC 5 cut(s) 11, 14, 24, 59, 351
Sau3AI GATC 8 cut(s) 27, 69, 103, 141, 192, 411, 556, 607
Sau96I GGNCC 2 cut(s) 124, 125
SchI GAGTC 1 cut(s) 534
ScrFI CCNGG 1 cut(s) 178
SduI GDGCHC 1 cut(s) 128
SetI ASST 5 cut(s) 12, 408, 498, 597, 617
SfaNI GCATC 1 cut(s) 313
SfuI TTCGAA 1 cut(s) 586
SmiMI CAYNNNNRTG 1 cut(s) 242
SmlI CTYRAG 2 cut(s) 407, 520
SmoI CTYRAG 2 cut(s) 407, 520
Sse9I AATT 3 cut(s) 434, 552, 579
SsiI CCGC 4 cut(s) 23, 80, 98, 548
SspMI CTAG 3 cut(s) 53, 170, 596
StyD4I CCNGG 1 cut(s) 176
StyI CCWWGG 2 cut(s) 399, 507
TaaI ACNGT 1 cut(s) 188
TaqI TCGA 1 cut(s) 586
TasI AATT 3 cut(s) 434, 552, 579
TauI GCSGC 1 cut(s) 26
TfiI GAWTC 2 cut(s) 49, 267
Tru1I TTAA 2 cut(s) 374, 408
Tru9I TTAA 2 cut(s) 374, 408
TscAI CASTG 1 cut(s) 93
TseFI GTSAC 1 cut(s) 88
TseI GCWGC 4 cut(s) 10, 13, 58, 350
Tsp45I GTSAC 1 cut(s) 88
TspDTI ATGAA 3 cut(s) 254, 467, 549
TspGWI ACGGA 1 cut(s) 473
TspRI CASTG 1 cut(s) 93
Vha464I CTTAAG 1 cut(s) 407
XapI RAATTY 1 cut(s) 579
XceI RCATGY 1 cut(s) 247
XmiI GTMKAC 1 cut(s) 183
XmnI GAANNNNTTC 1 cut(s) 245
XspI CTAG 3 cut(s) 53, 170, 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.