Prupe.3G221400_v2.0.a1

cysteine-rich repeat secretory protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
22188792 .. 22189292
501 bp
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UTR
Exon/CDS
Intron
Prupe.3G221400.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 501 bp
ATGTTTTACTCAAGATTATTCATCAGCTTGAATCTTTTATTTTTCTCTCTTTTTCTTCAAGAGACCTTTGGAGTTCGTTACGCACCTCAAGTTTTGGGGCATAATTGTTTCAATCAAGAAGAATTTCCAGCCAAAGAGTATTATGAGAATAACATGAATACGTTACTGACAGAAGTATTATTGAAAAATATTTCAGATTTAGGATATAAAAGTGGAGTTACCAATGGTACATCTAAATCTATAATAGAACAAAATACTTTTATTTATGGGTTAGTACAATGTTGGAATTATCTTCTTAAGGACAGTCCTTACACACCATGCAAAAAATGTGTGAGTACAGCAAGCCTAGAGCTTCGCAAGCGTTGCCCTTCTAATCGAGGAGCTATAATTTGGATGGTAAGCTGCCTCTTAAAATATTCCAATATAAAATCTTTTGGTGCAAGTGACACAAATAATAGGATTTATGAGACAAATTCCAAATTCATTAATGATCCATGTTGA

Protein Analysis

167

Amino Acids

19.1

Weight (kDa)

8.64

Isoelectric Point (pI)

39.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 485
AcsI RAATTY 3 cut(s) 122, 472, 479
AfaI GTAC 3 cut(s) 229, 276, 337
AflII CTTAAG 1 cut(s) 296
AgsI TTSAA 4 cut(s) 31, 59, 112, 184
AluBI AGCT 4 cut(s) 27, 352, 383, 402
AluI AGCT 4 cut(s) 27, 352, 383, 402
Alw26I GTCTC 2 cut(s) 56, 461
AlwI GGATC 1 cut(s) 485
ApeKI GCWGC 1 cut(s) 402
ApoI RAATTY 3 cut(s) 122, 472, 479
AseI ATTAAT 1 cut(s) 486
Asp700I GAANNNNTTC 1 cut(s) 123
BbvI GCAGC 1 cut(s) 389
BccI CCATC 1 cut(s) 388
BcoDI GTCTC 2 cut(s) 56, 461
BfaI CTAG 1 cut(s) 347
BfrI CTTAAG 1 cut(s) 296
BisI GCNGC 1 cut(s) 403
BlsI GCNGC 1 cut(s) 404
BpuEI CTTGAG 1 cut(s) 72
BsaI GGTCTC 1 cut(s) 56
BseGI GGATG 1 cut(s) 399
BseRI GAGGAG 1 cut(s) 393
BseXI GCAGC 1 cut(s) 389
BsmAI GTCTC 2 cut(s) 56, 461
Bso31I GGTCTC 1 cut(s) 56
Bsp143I GATC 1 cut(s) 490
BspPI GGATC 1 cut(s) 485
BspTI CTTAAG 1 cut(s) 296
BspTNI GGTCTC 1 cut(s) 56
BssMI GATC 1 cut(s) 490
Bst4CI ACNGT 1 cut(s) 305
BstAFI CTTAAG 1 cut(s) 296
BstAPI GCANNNNNTGC 1 cut(s) 363
BstC8I GCNNGC 2 cut(s) 343, 359
BstF5I GGATG 1 cut(s) 399
BstKTI GATC 1 cut(s) 493
BstMAI GTCTC 2 cut(s) 56, 461
BstMBI GATC 1 cut(s) 490
BstMWI GCNNNNNNNGC 2 cut(s) 358, 363
BstV1I GCAGC 1 cut(s) 389
BtsCI GGATG 1 cut(s) 399
Cac8I GCNNGC 2 cut(s) 343, 359
Csp6I GTAC 3 cut(s) 228, 275, 336
CviAII CATG 3 cut(s) 154, 318, 495
CviJI RGCY 6 cut(s) 27, 131, 345, 352, 383, 402
CviKI_1 RGCY 6 cut(s) 27, 131, 345, 352, 383, 402
CviQI GTAC 3 cut(s) 228, 275, 336
DpnI GATC 1 cut(s) 492
DpnII GATC 1 cut(s) 490
Eco31I GGTCTC 1 cut(s) 56
FaeI CATG 3 cut(s) 157, 321, 498
FatI CATG 3 cut(s) 153, 317, 494
Fnu4HI GCNGC 1 cut(s) 403
FokI GGATG 1 cut(s) 406
Fsp4HI GCNGC 1 cut(s) 403
FspBI CTAG 1 cut(s) 347
GluI GCNGC 1 cut(s) 403
Hin1II CATG 3 cut(s) 157, 321, 498
HinfI GANTC 1 cut(s) 31
Hpy188I TCNGA 1 cut(s) 196
Hpy188III TCNNGA 3 cut(s) 12, 59, 116
HpyAV CCTTC 1 cut(s) 378
HpyCH4III ACNGT 1 cut(s) 305
HpyCH4IV ACGT 1 cut(s) 161
HpyCH4V TGCA 2 cut(s) 321, 440
HpyF10VI GCNNNNNNNGC 2 cut(s) 358, 363
HpySE526I ACGT 1 cut(s) 161
Hsp92II CATG 3 cut(s) 157, 321, 498
Kzo9I GATC 1 cut(s) 490
LmnI GCTCC 1 cut(s) 380
LpnPI CCDG 1 cut(s) 141
Lsp1109I GCAGC 1 cut(s) 389
MaeI CTAG 1 cut(s) 347
MaeII ACGT 1 cut(s) 161
MaeIII GTNAC 4 cut(s) 77, 162, 217, 443
MalI GATC 1 cut(s) 492
MboI GATC 1 cut(s) 490
MboII GAAGA 3 cut(s) 47, 131, 284
MluCI AATT 6 cut(s) 103, 122, 286, 387, 472, 479
MmeI TCCRAC 1 cut(s) 263
MnlI CCTC 3 cut(s) 96, 371, 416
MroXI GAANNNNTTC 1 cut(s) 123
MseI TTAA 3 cut(s) 297, 410, 486
MspCI CTTAAG 1 cut(s) 296
MwoI GCNNNNNNNGC 2 cut(s) 358, 363
NdeII GATC 1 cut(s) 490
NlaIII CATG 3 cut(s) 157, 321, 498
NmuCI GTSAC 1 cut(s) 443
PdmI GAANNNNTTC 1 cut(s) 123
PfeI GAWTC 1 cut(s) 31
PkrI GCNGC 1 cut(s) 404
PshBI ATTAAT 1 cut(s) 486
RsaI GTAC 3 cut(s) 229, 276, 337
RsaNI GTAC 3 cut(s) 228, 275, 336
SaqAI TTAA 3 cut(s) 297, 410, 486
SatI GCNGC 1 cut(s) 403
Sau3AI GATC 1 cut(s) 490
SetI ASST 7 cut(s) 29, 68, 88, 164, 354, 385, 404
SmlI CTYRAG 3 cut(s) 10, 87, 296
SmoI CTYRAG 3 cut(s) 10, 87, 296
Sse9I AATT 6 cut(s) 103, 122, 286, 387, 472, 479
SspI AATATT 2 cut(s) 190, 416
SspMI CTAG 1 cut(s) 347
TaaI ACNGT 1 cut(s) 305
TaiI ACGT 1 cut(s) 164
TaqI TCGA 1 cut(s) 376
TasI AATT 6 cut(s) 103, 122, 286, 387, 472, 479
TatI WGTACW 2 cut(s) 274, 335
TfiI GAWTC 1 cut(s) 31
Tru1I TTAA 3 cut(s) 297, 410, 486
Tru9I TTAA 3 cut(s) 297, 410, 486
TseFI GTSAC 1 cut(s) 443
TseI GCWGC 1 cut(s) 402
Tsp45I GTSAC 1 cut(s) 443
TspDTI ATGAA 3 cut(s) 10, 170, 472
Vha464I CTTAAG 1 cut(s) 296
VspI ATTAAT 1 cut(s) 486
XapI RAATTY 3 cut(s) 122, 472, 479
XmnI GAANNNNTTC 1 cut(s) 123
XspI CTAG 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.