Prupe.3G226500_v2.0.a1

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
22592006 .. 22597034
5029 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G226500.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 1389 bp
ATGTTTGCTCAGCAACCAGCGCCATTCAAGGAACCTGATAGAGATGTTCAGAGCTTGCTGAACCTTGGTCATGTTCGGGCAGAGATCGAGTTTCTTGCAGATGTCATTCTCTGCAAGCAGAAGATGGGAGTTAGTAATATACAAAACAAAGAATTCCATGGCAACTGTAGAAGATCAAAAGGATGCAACTTACCATCACGTGAGAAGAACGAGCGGAGCATTTGTAACCTTGTCTTCCTATCTGCCGCTGACTTTCAGCACGTTCGTGCTCCGCACATGATCGCCTTGACTCATACTGATCCTAGTTCGTGGCACAAAAAGAAGAAGGAATTGAAGCAATTTGGATTAGCCACAAAAAAGACGACCCAAACTGTCACCTGCTCTAGCAGCAGATCGCGTGCCTCCAGCCCAGTTACAGCTGGACAACCCGACATACCGGATGCTACAGATAATTTCTCAAATGCAAACAAACTTGGACAAGGGGCCTATGGACCTGTTTACAAGGGCAAGTTTGTTGGAGATCAAGAAATCGCGGTAAAGAGGTTATCAAGGGCTTCAAGACAAGGCTTACAGGAATTTAAGAATGAGGTGGTGCTGATTGCCAAACTTCAACACCGAAACCTTGTTAGGCTTAAAGGATTTTGCATCGAAGGAGAAGAAAAAAATTTACTCTATGAGTACATGCCTAACCAAAGTCTAGACTTCTATATATTTGATCATACAAAAAGCATGGTTCTCAATTGGGAGATGCGCTTCAACATCATTTTGGGAATCGCTCGAGGACTTCTTTATCATCATCAAGATTCCCGATTGAGGATCGTTCACAGAGATTTGAAAACCAGCAACATTCTCTTAGATGAGGAGATGAACCCCAAGATATCTGACTTCGGCTTGGCGAGGATTGTTGGAGGCAAAGAAACTGATGGTTATATGTCTTCAGAGTACGCATTAGGTGGAACTTTCTCAATAAAATCATATGTGTATAGCTTTGGTGTGATTCTTCTTGAGATAATCAGTGGAACAGAGAACACAGGATTTTATCAATCCCAACAAACTTTCAGCCTCATAAGTTATGCATGGAAACTGTGGACAGAAAACAAGGCTTTGGAACTAATGGACAAGACTTTGGATGACAGTTGCAACAAAAGTCAATTTATTAAGTGTGTCAATTGCGTCAATTTTGGGCTCTTATGCGTGCAAGAAGACCCTGTTGAGCGTCCCGCCATGTCAAATGTTCTTACCATGCTTGACAGTGAAATTGCAATCTCTCCAACTCCTAAACAACCGGCCTTTCTCTTAAGGAGAGGCAACAACTCCCGCACAGCTTCTTCTTCTACAAAGCCAGAAACAATTCCCGAAATAACCACAAGTCTAGAAGAAGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin GUB_WAK_bind PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

463

Amino Acids

52.07

Weight (kDa)

8.75

Isoelectric Point (pI)

57.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 386
Acc36I ACCTGC 1 cut(s) 386
AccBSI CCGCTC 1 cut(s) 214
AccII CGCG 2 cut(s) 397, 533
AciI CCGC 6 cut(s) 214, 246, 272, 533, 1221, 1318
AclWI GGATC 2 cut(s) 293, 824
AcsI RAATTY 3 cut(s) 152, 575, 664
AcuI CTGAAG 1 cut(s) 921
AcvI CACGTG 1 cut(s) 200
AfaI GTAC 2 cut(s) 680, 944
AfiI CCNNNNNNNGG 1 cut(s) 813
AflII CTTAAG 1 cut(s) 1297
AgsI TTSAA 6 cut(s) 28, 334, 558, 611, 757, 835
AleI CACNNNNGTG 1 cut(s) 264
AluBI AGCT 4 cut(s) 54, 419, 987, 1325
AluI AGCT 4 cut(s) 54, 419, 987, 1325
Alw21I GWGCWC 1 cut(s) 271
AlwI GGATC 2 cut(s) 293, 824
Ama87I CYCGRG 1 cut(s) 777
AoxI GGCC 2 cut(s) 483, 1287
ApeKI GCWGC 1 cut(s) 387
ApoI RAATTY 3 cut(s) 152, 575, 664
Asp700I GAANNNNTTC 1 cut(s) 1350
AspLEI GCGC 2 cut(s) 22, 753
AspS9I GGNCC 2 cut(s) 483, 491
AsuHPI GGTGA 1 cut(s) 367
AvaI CYCGRG 1 cut(s) 777
AvaII GGWCC 1 cut(s) 491
BanII GRGCYC 1 cut(s) 1188
BbrPI CACGTG 1 cut(s) 200
BbsI GAAGAC 3 cut(s) 226, 927, 1209
Bbv12I GWGCWC 1 cut(s) 271
BbvI GCAGC 1 cut(s) 399
BccI CCATC 3 cut(s) 118, 202, 917
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BclI TGATCA 1 cut(s) 715
BfaI CTAG 4 cut(s) 303, 384, 698, 1373
BfmI CTRYAG 2 cut(s) 166, 444
BfoI RGCGCY 1 cut(s) 23
BfrI CTTAAG 1 cut(s) 1297
BfuAI ACCTGC 1 cut(s) 386
BisI GCNGC 2 cut(s) 246, 388
BlpI GCTNAGC 1 cut(s) 9
BlsI GCNGC 2 cut(s) 247, 389
Bme18I GGWCC 1 cut(s) 491
BmeT110I CYCGRG 1 cut(s) 777
BmgT120I GGNCC 2 cut(s) 483, 491
BmiI GGNNCC 2 cut(s) 33, 484
BmrI ACTGGG 1 cut(s) 404
BmsI GCATC 4 cut(s) 173, 430, 654, 738
BmuI ACTGGG 1 cut(s) 404
BpiI GAAGAC 3 cut(s) 226, 927, 1209
BpmI CTGGAG 1 cut(s) 388
Bpu1102I GCTNAGC 1 cut(s) 9
BpuEI CTTGAG 1 cut(s) 1025
BsaAI YACGTR 1 cut(s) 200
BsaJI CCNNGG 2 cut(s) 64, 157
BsaWI WCCGGW 1 cut(s) 436
BsaXI ACNNNNNCTCC 2 cut(s) 208, 238
Bsc4I CCNNNNNNNGG 1 cut(s) 813
Bse118I RCCGGY 1 cut(s) 1285
Bse1I ACTGG 1 cut(s) 410
BseDI CCNNGG 2 cut(s) 64, 157
BseGI GGATG 3 cut(s) 188, 445, 1135
BseLI CCNNNNNNNGG 1 cut(s) 813
BseMII CTCAG 1 cut(s) 23
BseNI ACTGG 1 cut(s) 410
BseRI GAGGAG 1 cut(s) 875
BseXI GCAGC 1 cut(s) 399
Bsh1236I CGCG 2 cut(s) 397, 533
BshFI GGCC 2 cut(s) 485, 1289
BsiHKAI GWGCWC 1 cut(s) 271
BsiHKCI CYCGRG 1 cut(s) 777
BsiSI CCGG 2 cut(s) 437, 1286
BslFI GGGAC 1 cut(s) 1203
BslI CCNNNNNNNGG 1 cut(s) 813
BsmFI GGGAC 1 cut(s) 1203
BsnI GGCC 2 cut(s) 485, 1289
BsoBI CYCGRG 1 cut(s) 777
Bsp1286I GDGCHC 2 cut(s) 271, 1188
Bsp143I GATC 8 cut(s) 84, 173, 279, 298, 392, 520, 715, 816
Bsp1720I GCTNAGC 1 cut(s) 9
Bsp19I CCATGG 1 cut(s) 157
BspACI CCGC 6 cut(s) 214, 246, 272, 533, 1221, 1318
BspANI GGCC 2 cut(s) 485, 1289
BspCNI CTCAG 1 cut(s) 22
BspFNI CGCG 2 cut(s) 397, 533
BspLI GGNNCC 2 cut(s) 33, 484
BspMI ACCTGC 1 cut(s) 386
BspPI GGATC 2 cut(s) 293, 824
BspTI CTTAAG 1 cut(s) 1297
BsrBI CCGCTC 1 cut(s) 214
BsrFI RCCGGY 1 cut(s) 1285
BsrI ACTGG 1 cut(s) 410
BssAI RCCGGY 1 cut(s) 1285
BssECI CCNNGG 2 cut(s) 64, 157
BssMI GATC 8 cut(s) 84, 173, 279, 298, 392, 520, 715, 816
BssT1I CCWWGG 2 cut(s) 64, 157
Bst4CI ACNGT 5 cut(s) 167, 373, 1086, 1136, 1253
BstAFI CTTAAG 1 cut(s) 1297
BstBAI YACGTR 1 cut(s) 200
BstC8I GCNNGC 4 cut(s) 56, 116, 399, 1196
BstDEI CTNAG 2 cut(s) 9, 853
BstDSI CCRYGG 1 cut(s) 157
BstF5I GGATG 3 cut(s) 188, 445, 1135
BstFNI CGCG 2 cut(s) 397, 533
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 2 cut(s) 22, 753
BstKTI GATC 8 cut(s) 87, 176, 282, 301, 395, 523, 718, 819
BstMBI GATC 8 cut(s) 84, 173, 279, 298, 392, 520, 715, 816
BstMWI GCNNNNNNNGC 2 cut(s) 19, 387
BstNSI RCATGY 1 cut(s) 685
BstSFI CTRYAG 2 cut(s) 166, 444
BstUI CGCG 2 cut(s) 397, 533
BstV1I GCAGC 1 cut(s) 399
BstV2I GAAGAC 3 cut(s) 226, 927, 1209
BsuRI GGCC 2 cut(s) 485, 1289
BtgI CCRYGG 1 cut(s) 157
BtsCI GGATG 3 cut(s) 188, 445, 1135
BtsIMutI CAGTG 2 cut(s) 1021, 1258
BveI ACCTGC 1 cut(s) 386
Cac8I GCNNGC 4 cut(s) 56, 116, 399, 1196
CfoI GCGC 2 cut(s) 22, 753
Cfr10I RCCGGY 1 cut(s) 1285
Cfr13I GGNCC 2 cut(s) 483, 491
CseI GACGC 2 cut(s) 1162, 1205
Csp6I GTAC 2 cut(s) 679, 943
CviAII CATG 8 cut(s) 71, 158, 277, 682, 730, 1077, 1225, 1243
CviQI GTAC 2 cut(s) 679, 943
DdeI CTNAG 2 cut(s) 9, 853
DpnI GATC 8 cut(s) 86, 175, 281, 300, 394, 522, 717, 818
DpnII GATC 8 cut(s) 84, 173, 279, 298, 392, 520, 715, 816
Eco130I CCWWGG 2 cut(s) 64, 157
Eco24I GRGCYC 1 cut(s) 1188
Eco32I GATATC 1 cut(s) 879
Eco47I GGWCC 1 cut(s) 491
Eco57I CTGAAG 1 cut(s) 921
Eco72I CACGTG 1 cut(s) 200
Eco88I CYCGRG 1 cut(s) 777
EcoO109I RGGNCCY 1 cut(s) 483
EcoRI GAATTC 1 cut(s) 152
EcoRV GATATC 1 cut(s) 879
EcoT14I CCWWGG 2 cut(s) 64, 157
EcoT22I ATGCAT 1 cut(s) 1078
EcoT38I GRGCYC 1 cut(s) 1188
ErhI CCWWGG 2 cut(s) 64, 157
FaeI CATG 8 cut(s) 74, 161, 280, 685, 733, 1080, 1228, 1246
FaqI GGGAC 1 cut(s) 1203
FatI CATG 8 cut(s) 70, 157, 276, 681, 729, 1076, 1224, 1242
FauI CCCGC 2 cut(s) 1228, 1325
FauNDI CATATG 1 cut(s) 976
FbaI TGATCA 1 cut(s) 715
Fnu4HI GCNGC 2 cut(s) 246, 388
FokI GGATG 3 cut(s) 195, 452, 1142
FriOI GRGCYC 1 cut(s) 1188
Fsp4HI GCNGC 2 cut(s) 246, 388
FspBI CTAG 4 cut(s) 303, 384, 698, 1373
GlaI GCGC 2 cut(s) 21, 752
GluI GCNGC 2 cut(s) 246, 388
GsuI CTGGAG 1 cut(s) 388
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 2 cut(s) 485, 1289
HapII CCGG 2 cut(s) 437, 1286
HgaI GACGC 2 cut(s) 1162, 1205
HhaI GCGC 2 cut(s) 22, 753
Hin1II CATG 8 cut(s) 74, 161, 280, 685, 733, 1080, 1228, 1246
Hin6I GCGC 2 cut(s) 20, 751
HinP1I GCGC 2 cut(s) 20, 751
HinfI GANTC 4 cut(s) 289, 771, 803, 997
HpaII CCGG 2 cut(s) 437, 1286
HphI GGTGA 1 cut(s) 367
Hpy166II GTNNAC 3 cut(s) 499, 823, 1089
Hpy188I TCNGA 3 cut(s) 51, 883, 940
Hpy188III TCNNGA 8 cut(s) 524, 558, 698, 800, 807, 1004, 1355, 1373
Hpy8I GTNNAC 3 cut(s) 499, 823, 1089
HpyAV CCTTC 3 cut(s) 319, 644, 1373
HpyCH4III ACNGT 5 cut(s) 167, 373, 1086, 1136, 1253
HpyCH4IV ACGT 2 cut(s) 199, 261
HpyCH4V TGCA 9 cut(s) 98, 114, 186, 464, 645, 1076, 1140, 1198, 1262
HpyF10VI GCNNNNNNNGC 2 cut(s) 19, 387
HpyF3I CTNAG 2 cut(s) 9, 853
HpySE526I ACGT 2 cut(s) 199, 261
Hsp92II CATG 8 cut(s) 74, 161, 280, 685, 733, 1080, 1228, 1246
HspAI GCGC 2 cut(s) 20, 751
Ksp22I TGATCA 1 cut(s) 715
Kzo9I GATC 8 cut(s) 84, 173, 279, 298, 392, 520, 715, 816
LmnI GCTCC 2 cut(s) 216, 274
Lsp1109I GCAGC 1 cut(s) 399
LweI GCATC 4 cut(s) 173, 430, 654, 738
MaeI CTAG 4 cut(s) 303, 384, 698, 1373
MaeII ACGT 2 cut(s) 199, 261
MaeIII GTNAC 3 cut(s) 224, 373, 412
MalI GATC 8 cut(s) 86, 175, 281, 300, 394, 522, 717, 818
MbiI CCGCTC 1 cut(s) 214
MboI GATC 8 cut(s) 84, 173, 279, 298, 392, 520, 715, 816
MfeI CAATTG 2 cut(s) 739, 1168
MhlI GDGCHC 2 cut(s) 271, 1188
MlyI GAGTC 1 cut(s) 283
MmeI TCCRAC 3 cut(s) 496, 886, 1295
Mph1103I ATGCAT 1 cut(s) 1078
MroXI GAANNNNTTC 1 cut(s) 1350
MseI TTAA 4 cut(s) 579, 633, 1158, 1298
MslI CAYNNNNRTG 1 cut(s) 264
MspA1I CMGCKG 2 cut(s) 248, 419
MspCI CTTAAG 1 cut(s) 1297
MspI CCGG 2 cut(s) 437, 1286
MunI CAATTG 2 cut(s) 739, 1168
MvnI CGCG 2 cut(s) 397, 533
MwoI GCNNNNNNNGC 2 cut(s) 19, 387
NcoI CCATGG 1 cut(s) 157
NdeI CATATG 1 cut(s) 976
NdeII GATC 8 cut(s) 84, 173, 279, 298, 392, 520, 715, 816
NlaIII CATG 8 cut(s) 74, 161, 280, 685, 733, 1080, 1228, 1246
NlaIV GGNNCC 2 cut(s) 33, 484
NmuCI GTSAC 1 cut(s) 373
NsiI ATGCAT 1 cut(s) 1078
NspI RCATGY 1 cut(s) 685
OliI CACNNNNGTG 1 cut(s) 264
PaeR7I CTCGAG 1 cut(s) 777
PaqCI CACCTGC 1 cut(s) 386
PdmI GAANNNNTTC 1 cut(s) 1350
PfeI GAWTC 3 cut(s) 771, 803, 997
PkrI GCNGC 2 cut(s) 247, 389
PleI GAGTC 1 cut(s) 283
PmaCI CACGTG 1 cut(s) 200
PmlI CACGTG 1 cut(s) 200
PpsI GAGTC 1 cut(s) 283
Ppu21I YACGTR 1 cut(s) 200
PspCI CACGTG 1 cut(s) 200
PspN4I GGNNCC 2 cut(s) 33, 484
PspPI GGNCC 2 cut(s) 483, 491
PspXI VCTCGAGB 1 cut(s) 777
PvuII CAGCTG 1 cut(s) 419
RsaI GTAC 2 cut(s) 680, 944
RsaNI GTAC 2 cut(s) 679, 943
RseI CAYNNNNRTG 1 cut(s) 264
SaqAI TTAA 4 cut(s) 579, 633, 1158, 1298
SatI GCNGC 2 cut(s) 246, 388
Sau3AI GATC 8 cut(s) 84, 173, 279, 298, 392, 520, 715, 816
Sau96I GGNCC 2 cut(s) 483, 491
SchI GAGTC 1 cut(s) 283
SduI GDGCHC 2 cut(s) 271, 1188
SfaNI GCATC 4 cut(s) 173, 430, 654, 738
SfcI CTRYAG 2 cut(s) 166, 444
Sfr274I CTCGAG 1 cut(s) 777
SinI GGWCC 1 cut(s) 491
SlaI CTCGAG 1 cut(s) 777
SmiMI CAYNNNNRTG 1 cut(s) 264
SmlI CTYRAG 3 cut(s) 777, 1004, 1297
SmoI CTYRAG 3 cut(s) 777, 1004, 1297
SsiI CCGC 6 cut(s) 214, 246, 272, 533, 1221, 1318
SspMI CTAG 4 cut(s) 303, 384, 698, 1373
StyI CCWWGG 2 cut(s) 64, 157
TaaI ACNGT 5 cut(s) 167, 373, 1086, 1136, 1253
TaiI ACGT 2 cut(s) 202, 264
TaqI TCGA 3 cut(s) 87, 648, 778
TatI WGTACW 1 cut(s) 678
TauI GCSGC 1 cut(s) 248
TfiI GAWTC 3 cut(s) 771, 803, 997
Tru1I TTAA 4 cut(s) 579, 633, 1158, 1298
Tru9I TTAA 4 cut(s) 579, 633, 1158, 1298
TscAI CASTG 2 cut(s) 1021, 1258
TseFI GTSAC 1 cut(s) 373
TseI GCWGC 1 cut(s) 387
Tsp45I GTSAC 1 cut(s) 373
TspDTI ATGAA 1 cut(s) 881
TspRI CASTG 2 cut(s) 1021, 1258
Vha464I CTTAAG 1 cut(s) 1297
VpaK11BI GGWCC 1 cut(s) 491
XapI RAATTY 3 cut(s) 152, 575, 664
XbaI TCTAGA 2 cut(s) 697, 1372
XceI RCATGY 1 cut(s) 685
XhoI CTCGAG 1 cut(s) 777
XmnI GAANNNNTTC 1 cut(s) 1350
XspI CTAG 4 cut(s) 303, 384, 698, 1373
Zsp2I ATGCAT 1 cut(s) 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.