Prupe.3G235400_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Reverse (-)
23075234 .. 23075974
741 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G235400.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 276 bp
ATGGCCAAGACCTTGTCTCAAATTGCACCACAAATCGCCTCACCTTCAATATCTCCTCTCACGTCTCCTGAGATTTTTCCAATCTATAATACCCACCTTCCCAATTTTCTCAGAGATGGCTTCGCGTCAATTCTTCAGAATTTTAATGCATTTCTCATTATTCCAATTGTGCAGTATCCACTGAATCAAAGGTTCGACCTAACGATGATGACACAAACCACAAGTGCGAAGGAGATAAGTGAAGTTGAATGGAAGAAGCTGCTGAGGGTGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

92

Amino Acids

10.37

Weight (kDa)

8.14

Isoelectric Point (pI)

48.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 125
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 139
AcuI CTGAAG 1 cut(s) 119
AgsI TTSAA 2 cut(s) 48, 248
AjiI CACGTC 1 cut(s) 63
AluBI AGCT 1 cut(s) 259
AluI AGCT 1 cut(s) 259
Alw26I GTCTC 2 cut(s) 21, 69
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 259
ApoI RAATTY 1 cut(s) 139
AsuHPI GGTGA 1 cut(s) 33
BalI TGGCCA 1 cut(s) 5
BbvCI CCTCAGC 1 cut(s) 263
BbvI GCAGC 1 cut(s) 246
BccI CCATC 1 cut(s) 110
BciVI GTATCC 1 cut(s) 186
BcoDI GTCTC 2 cut(s) 21, 69
BfuI GTATCC 1 cut(s) 186
BisI GCNGC 1 cut(s) 260
BlsI GCNGC 1 cut(s) 261
BmgBI CACGTC 1 cut(s) 63
Bpu10I CCTNAGC 1 cut(s) 263
BseMII CTCAG 3 cut(s) 60, 124, 254
BseRI GAGGAG 1 cut(s) 45
BseXI GCAGC 1 cut(s) 246
BsgI GTGCAG 1 cut(s) 191
Bsh1236I CGCG 1 cut(s) 125
BshFI GGCC 1 cut(s) 5
BsmAI GTCTC 2 cut(s) 21, 69
BsmBI CGTCTC 1 cut(s) 69
BsnI GGCC 1 cut(s) 5
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 3 cut(s) 61, 123, 255
BspFNI CGCG 1 cut(s) 125
BstDEI CTNAG 3 cut(s) 69, 110, 263
BstFNI CGCG 1 cut(s) 125
BstMAI GTCTC 2 cut(s) 21, 69
BstMWI GCNNNNNNNGC 1 cut(s) 268
BstUI CGCG 1 cut(s) 125
BstV1I GCAGC 1 cut(s) 246
BsuI GTATCC 1 cut(s) 186
BsuRI GGCC 1 cut(s) 5
BtrI CACGTC 1 cut(s) 63
BtsIMutI CAGTG 1 cut(s) 179
CseI GACGC 1 cut(s) 114
CviJI RGCY 3 cut(s) 5, 120, 259
CviKI_1 RGCY 3 cut(s) 5, 120, 259
DdeI CTNAG 3 cut(s) 69, 110, 263
EaeI YGGCCR 1 cut(s) 3
Eco57I CTGAAG 1 cut(s) 119
EcoT22I ATGCAT 1 cut(s) 151
Esp3I CGTCTC 1 cut(s) 69
FaiI YATR 1 cut(s) 87
Fnu4HI GCNGC 1 cut(s) 260
Fsp4HI GCNGC 1 cut(s) 260
GluI GCNGC 1 cut(s) 260
HaeIII GGCC 1 cut(s) 5
HgaI GACGC 1 cut(s) 114
HinfI GANTC 1 cut(s) 184
HphI GGTGA 1 cut(s) 33
Hpy188I TCNGA 2 cut(s) 113, 138
Hpy188III TCNNGA 1 cut(s) 68
HpyAV CCTTC 3 cut(s) 54, 107, 223
HpyCH4IV ACGT 1 cut(s) 62
HpyCH4V TGCA 4 cut(s) 26, 149, 172, 271
HpyF10VI GCNNNNNNNGC 1 cut(s) 268
HpyF3I CTNAG 3 cut(s) 69, 110, 263
HpySE526I ACGT 1 cut(s) 62
LpnPI CCDG 1 cut(s) 81
Lsp1109I GCAGC 1 cut(s) 246
MaeII ACGT 1 cut(s) 62
MboII GAAGA 2 cut(s) 125, 265
MfeI CAATTG 1 cut(s) 165
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 21, 103, 129, 139, 165
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 3 cut(s) 49, 66, 258
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 151
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 144
Msp20I TGGCCA 1 cut(s) 5
MunI CAATTG 1 cut(s) 165
MvnI CGCG 1 cut(s) 125
MwoI GCNNNNNNNGC 1 cut(s) 268
NsiI ATGCAT 1 cut(s) 151
PfeI GAWTC 1 cut(s) 184
PflFI GACNNNGTC 1 cut(s) 13
PkrI GCNGC 1 cut(s) 261
PsyI GACNNNGTC 1 cut(s) 13
SaqAI TTAA 1 cut(s) 144
SatI GCNGC 1 cut(s) 260
SetI ASST 7 cut(s) 14, 46, 65, 99, 194, 201, 261
SgeI CNNG 6 cut(s) 19, 25, 73, 80, 136, 234
Sse9I AATT 5 cut(s) 21, 103, 129, 139, 165
TaiI ACGT 1 cut(s) 65
TaqI TCGA 1 cut(s) 195
TasI AATT 5 cut(s) 21, 103, 129, 139, 165
TfiI GAWTC 1 cut(s) 184
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TscAI CASTG 1 cut(s) 186
TseI GCWGC 1 cut(s) 259
TspRI CASTG 1 cut(s) 186
Tth111I GACNNNGTC 1 cut(s) 13
XapI RAATTY 1 cut(s) 139
Zsp2I ATGCAT 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.