Prupe.3G267500_v2.0.a1

Protein of unknown function (DUF3675)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
N/A
Physical Location & Seq
Forward (+)
25005590 .. 25006150
561 bp
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UTR
Exon/CDS
Intron
Prupe.3G267500.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 288 bp
ATGTGTGTGGAGTTGTGTCGCAGGGATGGCTATTTCACCCTTAATAATACTCCGGTGGTGGCGGCCATGCAAGCTCAACGGACGGCACAGATTGACGCAGCAGCAGCAGAGTACATGCGGAGGCAGCAGGTTTATAATGCTAGAGCCTTCAGTGGCAGTGCAGTGTGCCGCATTGGAGCTGTTATTTGCCTGGCGTTTCTGGTAGTGAAAGATGTCTACTACTTCATACAAAATGGGGAGGAAAGTGACCTCATAACTATCTTTTGTGTAAGTGGAATATCACACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

96

Amino Acids

10.54

Weight (kDa)

6.52

Isoelectric Point (pI)

29.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 135
Acc36I ACCTGC 1 cut(s) 118
AccI GTMKAC 1 cut(s) 216
AciI CCGC 3 cut(s) 62, 118, 169
AcoI YGGCCR 1 cut(s) 63
AcuI CTGAAG 1 cut(s) 133
AfaI GTAC 1 cut(s) 113
AjnI CCWGG 1 cut(s) 189
AluBI AGCT 2 cut(s) 74, 179
AluI AGCT 2 cut(s) 74, 179
AoxI GGCC 1 cut(s) 63
ApeKI GCWGC 4 cut(s) 98, 101, 104, 124
AsuHPI GGTGA 1 cut(s) 28
BbvI GCAGC 4 cut(s) 110, 113, 116, 136
BccI CCATC 1 cut(s) 20
BceAI ACGGC 1 cut(s) 99
BciT130I CCWGG 1 cut(s) 191
BfaI CTAG 1 cut(s) 141
BfuAI ACCTGC 1 cut(s) 118
BisI GCNGC 6 cut(s) 63, 99, 102, 105, 125, 169
BlsI GCNGC 6 cut(s) 64, 100, 103, 106, 126, 170
Bme1390I CCNGG 1 cut(s) 191
BmrFI CCNGG 1 cut(s) 191
BsaWI WCCGGW 1 cut(s) 52
BseBI CCWGG 1 cut(s) 191
BseGI GGATG 1 cut(s) 31
BseXI GCAGC 4 cut(s) 110, 113, 116, 136
BsgI GTGCAG 1 cut(s) 180
BshFI GGCC 1 cut(s) 65
BsiSI CCGG 1 cut(s) 53
BsnI GGCC 1 cut(s) 65
BspACI CCGC 3 cut(s) 62, 118, 169
BspANI GGCC 1 cut(s) 65
BspMI ACCTGC 1 cut(s) 118
Bst2UI CCWGG 1 cut(s) 191
BstC8I GCNNGC 1 cut(s) 72
BstF5I GGATG 1 cut(s) 31
BstMWI GCNNNNNNNGC 4 cut(s) 27, 71, 104, 124
BstNI CCWGG 1 cut(s) 191
BstNSI RCATGY 1 cut(s) 118
BstSCI CCNGG 1 cut(s) 189
BstV1I GCAGC 4 cut(s) 110, 113, 116, 136
BsuRI GGCC 1 cut(s) 65
BtsCI GGATG 1 cut(s) 31
BtsI GCAGTG 2 cut(s) 163, 168
BtsIMutI CAGTG 4 cut(s) 157, 163, 168, 283
BveI ACCTGC 1 cut(s) 118
Cac8I GCNNGC 1 cut(s) 72
CseI GACGC 1 cut(s) 104
Csp6I GTAC 1 cut(s) 112
CviAII CATG 2 cut(s) 67, 115
CviJI RGCY 5 cut(s) 30, 65, 74, 146, 179
CviKI_1 RGCY 5 cut(s) 30, 65, 74, 146, 179
CviQI GTAC 1 cut(s) 112
EaeI YGGCCR 1 cut(s) 63
Eco57I CTGAAG 1 cut(s) 133
EcoRII CCWGG 1 cut(s) 189
FaeI CATG 2 cut(s) 70, 118
FaiI YATR 5 cut(s) 68, 116, 135, 227, 254
FatI CATG 2 cut(s) 66, 114
FblI GTMKAC 1 cut(s) 216
Fnu4HI GCNGC 6 cut(s) 63, 99, 102, 105, 125, 169
FokI GGATG 1 cut(s) 38
Fsp4HI GCNGC 6 cut(s) 63, 99, 102, 105, 125, 169
FspBI CTAG 1 cut(s) 141
GluI GCNGC 6 cut(s) 63, 99, 102, 105, 125, 169
HaeIII GGCC 1 cut(s) 65
HapII CCGG 1 cut(s) 53
HgaI GACGC 1 cut(s) 104
Hin1II CATG 2 cut(s) 70, 118
HpaII CCGG 1 cut(s) 53
HphI GGTGA 1 cut(s) 28
Hpy166II GTNNAC 1 cut(s) 217
Hpy8I GTNNAC 1 cut(s) 217
HpyAV CCTTC 1 cut(s) 157
HpyCH4V TGCA 2 cut(s) 70, 161
HpyF10VI GCNNNNNNNGC 4 cut(s) 27, 71, 104, 124
Hsp92II CATG 2 cut(s) 70, 118
LmnI GCTCC 1 cut(s) 176
LpnPI CCDG 6 cut(s) 7, 66, 113, 176, 185, 203
Lsp1109I GCAGC 4 cut(s) 110, 113, 116, 136
MaeI CTAG 1 cut(s) 141
MaeIII GTNAC 1 cut(s) 245
MnlI CCTC 3 cut(s) 114, 232, 260
MseI TTAA 1 cut(s) 42
MspI CCGG 1 cut(s) 53
MspR9I CCNGG 1 cut(s) 191
MvaI CCWGG 1 cut(s) 191
MwoI GCNNNNNNNGC 4 cut(s) 27, 71, 104, 124
NlaIII CATG 2 cut(s) 70, 118
NmuCI GTSAC 1 cut(s) 245
NspI RCATGY 1 cut(s) 118
PkrI GCNGC 6 cut(s) 64, 100, 103, 106, 126, 170
PsiI TTATAA 1 cut(s) 135
Psp6I CCWGG 1 cut(s) 189
PspGI CCWGG 1 cut(s) 189
RsaI GTAC 1 cut(s) 113
RsaNI GTAC 1 cut(s) 112
SaqAI TTAA 1 cut(s) 42
SatI GCNGC 6 cut(s) 63, 99, 102, 105, 125, 169
ScrFI CCNGG 1 cut(s) 191
SetI ASST 4 cut(s) 76, 132, 181, 252
SsiI CCGC 3 cut(s) 62, 118, 169
SspMI CTAG 1 cut(s) 141
StyD4I CCNGG 1 cut(s) 189
TatI WGTACW 1 cut(s) 111
TauI GCSGC 2 cut(s) 65, 171
Tru1I TTAA 1 cut(s) 42
Tru9I TTAA 1 cut(s) 42
TscAI CASTG 3 cut(s) 157, 163, 168
TseFI GTSAC 1 cut(s) 245
TseI GCWGC 4 cut(s) 98, 101, 104, 124
Tsp45I GTSAC 1 cut(s) 245
TspDTI ATGAA 1 cut(s) 214
TspGWI ACGGA 1 cut(s) 94
TspRI CASTG 3 cut(s) 157, 163, 168
XceI RCATGY 1 cut(s) 118
XmiI GTMKAC 1 cut(s) 216
XspI CTAG 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.