Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

25792771 .. 25794905

Gene Structure 2135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G284600.1_v2.0.a1.CDS.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1251 bp

ATGGCTGCAGCTTCAACTGATTCCACACCCTCTGTAAACAAGGCTTGGGTGTACTCAGAATATGGAAAGTCTGCAGATGTTTTGAAACTTGATCCCAATGTTCCTGTGCCGGAAATAAAGGAAGACCAGGTGCTCATCAAGGTGGTTGCTGCAGCTCTTAACCCAATTGATTACAAGAGGATGTTTGGGTATATTAAGGCCACCGACTCTCCTCTACCTACTGTTCCAGGGTATGATGTTGCTGGTGTGGTGGTGAAAGTGGGAAGCCAAGTAACAAAGTTTAAGGTGGGGGATGAAGTATATGGGGATCTCAATGAGAAAGCTGCGCAGCCAAAAAAATTTGGGTCTTTGGCAGAGTACACTGCTGCAGAAGAAAGAGTTTTGGCTCTGAAACCCAAAAATCTGAGTTTTGTTGAGGCTGCTAGCCTTCCCCTGGCCATTGAGACTGCCTATGAAGGGCTTGAACGAACTGAATTTTCTGCTGGTAAATCCATTCTTGTTTTAGGAGGCGCTGGGGGGCTAGCAAAGCATGTTTTTGGTGCTTCAAAAGTAGCAGCAACTGCAAGCACTAGAAAACTGGAGCTGTTGAGAAGCTTGGGTGCTGATTTGGCTGTCGACTATACCAAGGAGAAGTTTGAAGAATTGCCTGAGAAATTTGATGTGGTATATGATACAGTTGGGGAGTCAGATAGGGCAGTGAAGGCAGTGAAAGAAGGTGGGAAAGTAGTGACAATAGTATCAGGTCCAGCAGCACCACCTGCCGTCCATTTTGTACTGACTTCAACTGGGACTGTATTGGAGAAGCTGAAGCCATACTTGGAGGGTGGGAAGGTGAAGCCGGTGCTTGATCCCACAAGCCCATATCCCTTTTCCAAGACTGTTGAAGCATTTGCCTACCTTGAAACTTCCAGGGCTACAGGGAAGGACAACTTCAAAGACCTGCCTGAGAAATTTGATGTAGTCTATGATGCAGTTGGACAGTCGGATAGGGCAGTGAAGGCAGTGAAAAAGGGGGGAGAAGGTTGTGACAGTGGAAGGCCCAATAACACCACCAGCCTTCATGTTTATGCTGACTTCTATGGGTCTATCTTGGAGAAACTCAATCCTTACTTGGAGAGTGGGAAGGTAAAGGCGGTGATTGATCCCAATGGCCCATATCCCTTTTCTAAGAACCTTGAAGCATTTGCCTATCTTCAAGCTAGTAGCAGAGCTATAGGAAAGGTGGTTGTGTATCCCATCCCATCCCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ADH_N ADH_zinc_N ADH_zinc_N_2

Protein Analysis

417

Amino Acids

44.47

Weight (kDa)

6.41

Isoelectric Point (pI)

27.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	766
Acc16I	TGCGCA	1 cut(s)	327
Acc36I	ACCTGC	2 cut(s)	766, 948
AccI	GTMKAC	1 cut(s)	615
AciI	CCGC	1 cut(s)	1133
AclWI	GGATC	4 cut(s)	86, 315, 842, 1136
AcoI	YGGCCR	1 cut(s)	435
AcsI	RAATTY	4 cut(s)	338, 473, 653, 950
AcuI	CTGAAG	1 cut(s)	827
AfaI	GTAC	3 cut(s)	53, 359, 774
AfiI	CCNNNNNNNGG	2 cut(s)	433, 456
AjnI	CCWGG	4 cut(s)	126, 226, 432, 908
AjuI	GAANNNNNNNTTGG	2 cut(s)	800, 832
AluBI	AGCT	8 cut(s)	11, 155, 323, 583, 594, 805, 1199, 1211
AluI	AGCT	8 cut(s)	11, 155, 323, 583, 594, 805, 1199, 1211
Alw21I	GWGCWC	1 cut(s)	135
Alw26I	GTCTC	1 cut(s)	437
AlwI	GGATC	4 cut(s)	86, 315, 842, 1136
AlwNI	CAGNNNCTG	1 cut(s)	560
AoxI	GGCC	4 cut(s)	198, 435, 1037, 1150
ApoI	RAATTY	4 cut(s)	338, 473, 653, 950
AspLEI	GCGC	2 cut(s)	328, 512
AspS9I	GGNCC	3 cut(s)	743, 1038, 1151
AsuHPI	GGTGA	3 cut(s)	265, 844, 1147
AsuNHI	GCTAGC	2 cut(s)	422, 520
AvaII	GGWCC	1 cut(s)	743
BaeI	ACNNNNGTAYC	2 cut(s)	720, 753
BalI	TGGCCA	1 cut(s)	437
BbsI	GAAGAC	1 cut(s)	129
Bbv12I	GWGCWC	1 cut(s)	135
BbvI	GCAGC	9 cut(s)	20, 136, 164, 310, 340, 352, 406, 566, 761
BccI	CCATC	2 cut(s)	1244, 1249
BceAI	ACGGC	1 cut(s)	746
BciT130I	CCWGG	4 cut(s)	128, 228, 434, 910
BciVI	GTATCC	1 cut(s)	1242
BcoDI	GTCTC	1 cut(s)	437
BfaI	CTAG	4 cut(s)	423, 521, 570, 1200
BfmI	CTRYAG	6 cut(s)	6, 72, 150, 366, 915, 1212
BfoI	RGCGCY	1 cut(s)	513
BfuAI	ACCTGC	2 cut(s)	766, 948
BfuI	GTATCC	1 cut(s)	1242
Bme1390I	CCNGG	4 cut(s)	128, 228, 434, 910
Bme18I	GGWCC	1 cut(s)	743
BmgT120I	GGNCC	3 cut(s)	743, 1038, 1151
BmrFI	CCNGG	4 cut(s)	128, 228, 434, 910
BmrI	ACTGGG	1 cut(s)	795
BmsI	GCATC	1 cut(s)	958
BmtI	GCTAGC	2 cut(s)	426, 524
BmuI	ACTGGG	1 cut(s)	795
BpiI	GAAGAC	1 cut(s)	129
BpmI	CTGGAG	1 cut(s)	599
BsaJI	CCNNGG	4 cut(s)	227, 432, 624, 909
BsaXI	ACNNNNNCTCC	2 cut(s)	193, 223
Bsc4I	CCNNNNNNNGG	2 cut(s)	433, 456
Bse118I	RCCGGY	1 cut(s)	838
Bse1I	ACTGG	2 cut(s)	582, 790
BseBI	CCWGG	4 cut(s)	128, 228, 434, 910
BseDI	CCNNGG	4 cut(s)	227, 432, 624, 909
BseGI	GGATG	4 cut(s)	186, 298, 1236, 1241
BseLI	CCNNNNNNNGG	2 cut(s)	433, 456
BseMII	CTCAG	4 cut(s)	69, 395, 639, 936
BseNI	ACTGG	2 cut(s)	582, 790
BseRI	GAGGAG	1 cut(s)	201
BseXI	GCAGC	9 cut(s)	20, 136, 164, 310, 340, 352, 406, 566, 761
BseYI	CCCAGC	1 cut(s)	512
BshFI	GGCC	4 cut(s)	200, 437, 1039, 1152
BsiHKAI	GWGCWC	1 cut(s)	135
BsiSI	CCGG	2 cut(s)	110, 839
BslFI	GGGAC	1 cut(s)	802
BslI	CCNNNNNNNGG	2 cut(s)	433, 456
BsmAI	GTCTC	1 cut(s)	437
BsmFI	GGGAC	1 cut(s)	802
BsnI	GGCC	4 cut(s)	200, 437, 1039, 1152
Bsp1286I	GDGCHC	1 cut(s)	135
Bsp143I	GATC	4 cut(s)	91, 307, 847, 1141
BspACI	CCGC	1 cut(s)	1133
BspANI	GGCC	4 cut(s)	200, 437, 1039, 1152
BspCNI	CTCAG	4 cut(s)	68, 396, 640, 937
BspMAI	CTGCAG	4 cut(s)	10, 76, 154, 370
BspMI	ACCTGC	2 cut(s)	766, 948
BspOI	GCTAGC	2 cut(s)	426, 524
BspPI	GGATC	4 cut(s)	86, 315, 842, 1136
BsrFI	RCCGGY	1 cut(s)	838
BsrI	ACTGG	2 cut(s)	582, 790
BssAI	RCCGGY	1 cut(s)	838
BssECI	CCNNGG	4 cut(s)	227, 432, 624, 909
BssMI	GATC	4 cut(s)	91, 307, 847, 1141
BssT1I	CCWWGG	1 cut(s)	624
Bst2UI	CCWGG	4 cut(s)	128, 228, 434, 910
Bst4CI	ACNGT	6 cut(s)	223, 676, 793, 880, 981, 1031
BstAPI	GCANNNNNTGC	2 cut(s)	560, 758
BstC8I	GCNNGC	3 cut(s)	424, 522, 565
BstDEI	CTNAG	5 cut(s)	55, 404, 648, 945, 1167
BstF5I	GGATG	4 cut(s)	186, 298, 1236, 1241
BstH2I	RGCGCY	1 cut(s)	513
BstHHI	GCGC	2 cut(s)	328, 512
BstKTI	GATC	4 cut(s)	94, 310, 850, 1144
BstMAI	GTCTC	1 cut(s)	437
BstMBI	GATC	4 cut(s)	91, 307, 847, 1141
BstMWI	GCNNNNNNNGC	6 cut(s)	526, 560, 608, 701, 758, 998
BstNI	CCWGG	4 cut(s)	128, 228, 434, 910
BstNSI	RCATGY	1 cut(s)	533
BstSCI	CCNGG	4 cut(s)	126, 226, 432, 908
BstSFI	CTRYAG	6 cut(s)	6, 72, 150, 366, 915, 1212
BstV1I	GCAGC	9 cut(s)	20, 136, 164, 310, 340, 352, 406, 566, 761
BstV2I	GAAGAC	1 cut(s)	129
BstX2I	RGATCY	1 cut(s)	307
BstYI	RGATCY	1 cut(s)	307
BsuI	GTATCC	1 cut(s)	1242
BsuRI	GGCC	4 cut(s)	200, 437, 1039, 1152
BtsCI	GGATG	4 cut(s)	186, 298, 1236, 1241
BtsI	GCAGTG	5 cut(s)	360, 702, 711, 999, 1008
BtsIMutI	CAGTG	6 cut(s)	360, 702, 711, 999, 1008, 1036
BveI	ACCTGC	2 cut(s)	766, 948
Cac8I	GCNNGC	3 cut(s)	424, 522, 565
CaiI	CAGNNNCTG	1 cut(s)	560
CfoI	GCGC	2 cut(s)	328, 512
Cfr10I	RCCGGY	1 cut(s)	838
Cfr13I	GGNCC	3 cut(s)	743, 1038, 1151
CsiI	ACCWGGT	1 cut(s)	126
Csp6I	GTAC	3 cut(s)	52, 358, 773
CviAII	CATG	3 cut(s)	530, 1061, 1248
CviQI	GTAC	3 cut(s)	52, 358, 773
DdeI	CTNAG	5 cut(s)	55, 404, 648, 945, 1167
DpnI	GATC	4 cut(s)	93, 309, 849, 1143
DpnII	GATC	4 cut(s)	91, 307, 847, 1141
EaeI	YGGCCR	1 cut(s)	435
Eco130I	CCWWGG	1 cut(s)	624
Eco47I	GGWCC	1 cut(s)	743
Eco57I	CTGAAG	1 cut(s)	827
EcoRII	CCWGG	4 cut(s)	126, 226, 432, 908
EcoT14I	CCWWGG	1 cut(s)	624
ErhI	CCWWGG	1 cut(s)	624
FaeI	CATG	3 cut(s)	533, 1064, 1251
FalI	AAGNNNNNCTT	4 cut(s)	800, 832, 914, 946
FaqI	GGGAC	1 cut(s)	802
FatI	CATG	3 cut(s)	529, 1060, 1247
FblI	GTMKAC	1 cut(s)	615
FokI	GGATG	4 cut(s)	193, 305, 1223, 1228
FspBI	CTAG	4 cut(s)	423, 521, 570, 1200
FspI	TGCGCA	1 cut(s)	327
GlaI	GCGC	2 cut(s)	327, 511
GsaI	CCCAGC	1 cut(s)	516
GsuI	CTGGAG	1 cut(s)	599
HaeII	RGCGCY	1 cut(s)	513
HaeIII	GGCC	4 cut(s)	200, 437, 1039, 1152
HapII	CCGG	2 cut(s)	110, 839
HhaI	GCGC	2 cut(s)	328, 512
Hin1II	CATG	3 cut(s)	533, 1064, 1251
Hin6I	GCGC	2 cut(s)	326, 510
HinP1I	GCGC	2 cut(s)	326, 510
HincII	GTYRAC	1 cut(s)	616
HindII	GTYRAC	1 cut(s)	616
HindIII	AAGCTT	1 cut(s)	592
HinfI	GANTC	3 cut(s)	20, 206, 683
HpaII	CCGG	2 cut(s)	110, 839
HphI	GGTGA	3 cut(s)	265, 844, 1147
Hpy166II	GTNNAC	4 cut(s)	37, 52, 360, 616
Hpy188I	TCNGA	5 cut(s)	58, 390, 405, 688, 985
Hpy8I	GTNNAC	4 cut(s)	37, 52, 360, 616
HpyCH4III	ACNGT	6 cut(s)	223, 676, 793, 880, 981, 1031
HpyCH4V	TGCA	6 cut(s)	8, 74, 152, 368, 563, 971
HpyF10VI	GCNNNNNNNGC	6 cut(s)	526, 560, 608, 701, 758, 998
HpyF3I	CTNAG	5 cut(s)	55, 404, 648, 945, 1167
Hsp92II	CATG	3 cut(s)	533, 1064, 1251
HspAI	GCGC	2 cut(s)	326, 510
Kzo9I	GATC	4 cut(s)	91, 307, 847, 1141
LmnI	GCTCC	1 cut(s)	580
Lsp1109I	GCAGC	9 cut(s)	20, 136, 164, 310, 340, 352, 406, 566, 761
LweI	GCATC	1 cut(s)	958
MabI	ACCWGGT	1 cut(s)	126
MaeI	CTAG	4 cut(s)	423, 521, 570, 1200
MaeIII	GTNAC	3 cut(s)	271, 727, 1025
MalI	GATC	4 cut(s)	93, 309, 849, 1143
MboI	GATC	4 cut(s)	91, 307, 847, 1141
MboII	GAAGA	4 cut(s)	134, 383, 650, 1184
MfeI	CAATTG	1 cut(s)	165
MflI	RGATCY	1 cut(s)	307
MhlI	GDGCHC	1 cut(s)	135
MlsI	TGGCCA	1 cut(s)	437
MluCI	AATT	6 cut(s)	165, 338, 473, 641, 653, 950
MluNI	TGGCCA	1 cut(s)	437
MlyI	GAGTC	2 cut(s)	200, 692
MmeI	TCCRAC	2 cut(s)	955, 963
MnlI	CCTC	6 cut(s)	40, 171, 222, 409, 500, 814
Mox20I	TGGCCA	1 cut(s)	437
MscI	TGGCCA	1 cut(s)	437
MseI	TTAA	3 cut(s)	159, 195, 282
MslI	CAYNNNNRTG	3 cut(s)	140, 1065, 1246
Msp20I	TGGCCA	1 cut(s)	437
MspI	CCGG	2 cut(s)	110, 839
MspR9I	CCNGG	4 cut(s)	128, 228, 434, 910
MunI	CAATTG	1 cut(s)	165
MvaI	CCWGG	4 cut(s)	128, 228, 434, 910
MwoI	GCNNNNNNNGC	6 cut(s)	526, 560, 608, 701, 758, 998
NdeII	GATC	4 cut(s)	91, 307, 847, 1141
NheI	GCTAGC	2 cut(s)	422, 520
NlaIII	CATG	3 cut(s)	533, 1064, 1251
NmuCI	GTSAC	2 cut(s)	727, 1025
NsbI	TGCGCA	1 cut(s)	327
NspI	RCATGY	1 cut(s)	533
PaqCI	CACCTGC	1 cut(s)	766
PfeI	GAWTC	1 cut(s)	20
PleI	GAGTC	2 cut(s)	200, 691
PpsI	GAGTC	2 cut(s)	200, 691
Psp6I	CCWGG	4 cut(s)	126, 226, 432, 908
PspFI	CCCAGC	1 cut(s)	512
PspGI	CCWGG	4 cut(s)	126, 226, 432, 908
PspPI	GGNCC	3 cut(s)	743, 1038, 1151
PstI	CTGCAG	4 cut(s)	10, 76, 154, 370
PstNI	CAGNNNCTG	1 cut(s)	560
PsuI	RGATCY	1 cut(s)	307
RsaI	GTAC	3 cut(s)	53, 359, 774
RsaNI	GTAC	3 cut(s)	52, 358, 773
RseI	CAYNNNNRTG	3 cut(s)	140, 1065, 1246
SalI	GTCGAC	1 cut(s)	614
SaqAI	TTAA	3 cut(s)	159, 195, 282
Sau3AI	GATC	4 cut(s)	91, 307, 847, 1141
Sau96I	GGNCC	3 cut(s)	743, 1038, 1151
SchI	GAGTC	2 cut(s)	200, 692
ScrFI	CCNGG	4 cut(s)	128, 228, 434, 910
SduI	GDGCHC	1 cut(s)	135
SexAI	ACCWGGT	1 cut(s)	126
SfaNI	GCATC	1 cut(s)	958
SfcI	CTRYAG	6 cut(s)	6, 72, 150, 366, 915, 1212
SinI	GGWCC	1 cut(s)	743
SmiMI	CAYNNNNRTG	3 cut(s)	140, 1065, 1246
Sse9I	AATT	6 cut(s)	165, 338, 473, 641, 653, 950
SsiI	CCGC	1 cut(s)	1133
SspMI	CTAG	4 cut(s)	423, 521, 570, 1200
StyD4I	CCNGG	4 cut(s)	126, 226, 432, 908
StyI	CCWWGG	1 cut(s)	624
TaaI	ACNGT	6 cut(s)	223, 676, 793, 880, 981, 1031
TaqI	TCGA	1 cut(s)	615
TasI	AATT	6 cut(s)	165, 338, 473, 641, 653, 950
TatI	WGTACW	3 cut(s)	51, 357, 772
TfiI	GAWTC	1 cut(s)	20
Tru1I	TTAA	3 cut(s)	159, 195, 282
Tru9I	TTAA	3 cut(s)	159, 195, 282
TscAI	CASTG	6 cut(s)	367, 702, 711, 999, 1008, 1036
TseFI	GTSAC	2 cut(s)	727, 1025
Tsp45I	GTSAC	2 cut(s)	727, 1025
TspDTI	ATGAA	3 cut(s)	309, 468, 1049
TspRI	CASTG	6 cut(s)	367, 702, 711, 999, 1008, 1036
VpaK11BI	GGWCC	1 cut(s)	743
XapI	RAATTY	4 cut(s)	338, 473, 653, 950
XceI	RCATGY	1 cut(s)	533
XmiI	GTMKAC	1 cut(s)	615
XspI	CTAG	4 cut(s)	423, 521, 570, 1200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.