Prupe.4G025800_v2.0.a1
MYB Family

MYB-like transcription factor ETC1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
1211090 .. 1211665
576 bp
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UTR
Exon/CDS
Intron
Prupe.4G025800.1

Sequence Viewer

Length: 168 bp
ATGGCCGACTCCGAACACTCTTCTTCCGATGACTCTTTCTCGGACTCTCAAGCTACAGAGAAAAGCAGACAAGAACCTGAGCTTCAATTCTCTGAGGACGAGGAAGCACTTATTATAAGAATGTACAATCTAGTGGGAGAGAGGTTGGTTCTTCTTCTTCTTCTTTAG

Protein Analysis

56

Amino Acids

6.27

Weight (kDa)

4.11

Isoelectric Point (pI)

73.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 116
AcoI YGGCCR 1 cut(s) 3
AfaI GTAC 1 cut(s) 125
AgsI TTSAA 1 cut(s) 86
AluBI AGCT 2 cut(s) 53, 82
AluI AGCT 2 cut(s) 53, 82
AoxI GGCC 1 cut(s) 3
BfaI CTAG 1 cut(s) 131
BfmI CTRYAG 1 cut(s) 54
Bpu10I CCTNAGC 1 cut(s) 78
BpuEI CTTGAG 1 cut(s) 33
BseMII CTCAG 2 cut(s) 69, 84
BshFI GGCC 1 cut(s) 5
BsnI GGCC 1 cut(s) 5
Bsp1407I TGTACA 1 cut(s) 123
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 2 cut(s) 70, 85
BsrGI TGTACA 1 cut(s) 123
Bst6I CTCTTC 1 cut(s) 25
BstAUI TGTACA 1 cut(s) 123
BstDEI CTNAG 2 cut(s) 78, 93
BstSFI CTRYAG 1 cut(s) 54
BsuRI GGCC 1 cut(s) 5
Csp6I GTAC 1 cut(s) 124
CviJI RGCY 3 cut(s) 5, 53, 82
CviKI_1 RGCY 3 cut(s) 5, 53, 82
CviQI GTAC 1 cut(s) 124
DdeI CTNAG 2 cut(s) 78, 93
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 25
EarI CTCTTC 1 cut(s) 25
FaiI YATR 1 cut(s) 116
FspBI CTAG 1 cut(s) 131
HaeIII GGCC 1 cut(s) 5
HinfI GANTC 3 cut(s) 8, 32, 44
Hpy188I TCNGA 4 cut(s) 13, 28, 43, 94
HpyF3I CTNAG 2 cut(s) 78, 93
LpnPI CCDG 1 cut(s) 90
MaeI CTAG 1 cut(s) 131
MboII GAAGA 6 cut(s) 12, 15, 143, 146, 149, 152
MluCI AATT 1 cut(s) 86
MlyI GAGTC 3 cut(s) 2, 26, 38
MnlI CCTC 3 cut(s) 88, 94, 135
PleI GAGTC 3 cut(s) 2, 26, 38
PpsI GAGTC 3 cut(s) 2, 26, 38
PsiI TTATAA 1 cut(s) 116
RsaI GTAC 1 cut(s) 125
RsaNI GTAC 1 cut(s) 124
SchI GAGTC 3 cut(s) 2, 26, 38
SetI ASST 4 cut(s) 55, 79, 84, 146
SfcI CTRYAG 1 cut(s) 54
SgeI CNNG 6 cut(s) 52, 62, 83, 89, 112, 143
SmlI CTYRAG 1 cut(s) 48
SmoI CTYRAG 1 cut(s) 48
Sse9I AATT 1 cut(s) 86
SspMI CTAG 1 cut(s) 131
TasI AATT 1 cut(s) 86
TatI WGTACW 1 cut(s) 123
XspI CTAG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.