Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

4733384 .. 4735018

Gene Structure 1635 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G093900.1_v2.0.a1.CDS.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 801 bp

ATGGGAAAGCTGAAGAAGGGGCTTAATCCAATGTCCTTTGGATACCTTGTGTTTGTGTCTCTTTATCTGACAACAGCTTTCAAAACTGGAGAAGGAATAGCAGTAGGGAGAAGCTTTTCCATGTTCAAGAATTACCACATTGATGGGAACAACGAAATGATTGCCACTTTAATCACTCATCGACCGTTTTCCAGATCAGCAGTTAACTACAATGCAGGATACAAGACGGCACTGTCAAACGTTGTCATGGCAATTGCGGTTATGTTCACATTGTTGTTCCTCACTCCTCTGTTCCATTACACGTGCTACTATGAAGCCGCAATTCACCTCTGGAAGGTTGACAAGTTTGACTTTGTTGTCTGCATGAGTGTCTGTATCCACGTCGTCTTTGGCAGCGTTGAAATCGGCCTATTCTTAGCGGTTGCAAGGGTACTTTTGTTTGTGGCAAGGCCAAGGACTTTTGTTCGAGGAAACCTTCCAAATTCCATGGTTTACAGAAATATAAATGATGAGGAAGGTAGGATCAAATCTGCAGGGAACGGTAGCTTACAATATGTGATATTGGATACGACTGATAGCATAGACACAAGTGGGATAAGTATGTTTGAAGAGCTTGTACTGGCAAACTCAGGAAGCGAGGTGATGAAGAAGATGAACAAGTCAGAGTTGATTGAGAAAATATGTCAAGAATGGATTTATCTCACAGTTGCAGAGGCTGTTGCAGCATGCAACTTCCTGCTTCACTCCACCAAGCCCAACCCCGGCAAAGATCAAGAACCAGTTGCAAGGAACAACGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008272 GO:0008509 GO:0009507 GO:0009536 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

267

Amino Acids

29.68

Weight (kDa)

8.51

Isoelectric Point (pI)

32.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	232, 356
AciI	CCGC	3 cut(s)	257, 318, 419
AclI	AACGTT	2 cut(s)	240, 795
AclWI	GGATC	1 cut(s)	530
AcsI	RAATTY	1 cut(s)	481
AcuI	CTGAAG	1 cut(s)	32
AcvI	CACGTG	1 cut(s)	303
AfaI	GTAC	2 cut(s)	432, 618
AfiI	CCNNNNNNNGG	2 cut(s)	334, 761
AflIII	ACRYGT	1 cut(s)	300
AgsI	TTSAA	4 cut(s)	82, 127, 401, 608
AjiI	CACGTC	1 cut(s)	382
AluBI	AGCT	5 cut(s)	10, 77, 114, 546, 613
AluI	AGCT	5 cut(s)	10, 77, 114, 546, 613
Alw26I	GTCTC	1 cut(s)	63
AlwI	GGATC	1 cut(s)	530
AlwNI	CAGNNNCTG	1 cut(s)	716
AoxI	GGCC	2 cut(s)	406, 449
ApeKI	GCWGC	2 cut(s)	393, 722
ApoI	RAATTY	1 cut(s)	481
Asp700I	GAANNNNTTC	1 cut(s)	115
AsuC2I	CCSGG	1 cut(s)	762
AsuHPI	GGTGA	2 cut(s)	317, 652
BaeI	ACNNNNGTAYC	2 cut(s)	422, 455
BarI	GAAGNNNNNNTAC	2 cut(s)	600, 632
BbrPI	CACGTG	1 cut(s)	303
BbvI	GCAGC	2 cut(s)	405, 734
BccI	CCATC	1 cut(s)	137
BceAI	ACGGC	1 cut(s)	243
BcgI	CGANNNNNNTGC	2 cut(s)	143, 177
BciVI	GTATCC	4 cut(s)	35, 212, 386, 559
BcnI	CCSGG	1 cut(s)	762
BcoDI	GTCTC	1 cut(s)	63
BfmI	CTRYAG	1 cut(s)	531
BfuI	GTATCC	4 cut(s)	35, 212, 386, 559
BisI	GCNGC	3 cut(s)	318, 394, 723
BlsI	GCNGC	3 cut(s)	319, 395, 724
Bme1390I	CCNGG	1 cut(s)	762
BmgBI	CACGTC	1 cut(s)	382
BmrFI	CCNGG	1 cut(s)	762
BpmI	CTGGAG	1 cut(s)	108
BpuMI	CCSGG	1 cut(s)	762
BsaAI	YACGTR	1 cut(s)	303
BsaJI	CCNNGG	3 cut(s)	452, 486, 760
Bsc4I	CCNNNNNNNGG	2 cut(s)	334, 761
Bse1I	ACTGG	3 cut(s)	91, 624, 779
BseDI	CCNNGG	3 cut(s)	452, 486, 760
BseLI	CCNNNNNNNGG	2 cut(s)	334, 761
BseMII	CTCAG	1 cut(s)	642
BseNI	ACTGG	3 cut(s)	91, 624, 779
BseRI	GAGGAG	1 cut(s)	276
BseXI	GCAGC	2 cut(s)	405, 734
Bsh1285I	CGRYCG	1 cut(s)	185
BshFI	GGCC	2 cut(s)	408, 451
BsiEI	CGRYCG	1 cut(s)	185
BsiSI	CCGG	1 cut(s)	762
BslI	CCNNNNNNNGG	2 cut(s)	334, 761
BsmAI	GTCTC	1 cut(s)	63
BsnI	GGCC	2 cut(s)	408, 451
Bsp143I	GATC	3 cut(s)	194, 522, 769
Bsp19I	CCATGG	1 cut(s)	486
BspACI	CCGC	3 cut(s)	257, 318, 419
BspANI	GGCC	2 cut(s)	408, 451
BspCNI	CTCAG	1 cut(s)	641
BspMAI	CTGCAG	1 cut(s)	535
BspPI	GGATC	1 cut(s)	530
BspQI	GCTCTTC	1 cut(s)	603
BsrI	ACTGG	3 cut(s)	91, 624, 779
BssECI	CCNNGG	3 cut(s)	452, 486, 760
BssMI	GATC	3 cut(s)	194, 522, 769
BssT1I	CCWWGG	2 cut(s)	452, 486
Bst4CI	ACNGT	4 cut(s)	186, 234, 542, 706
Bst6I	CTCTTC	1 cut(s)	603
BstBAI	YACGTR	1 cut(s)	303
BstC8I	GCNNGC	1 cut(s)	727
BstDEI	CTNAG	2 cut(s)	415, 628
BstDSI	CCRYGG	1 cut(s)	486
BstENI	CCTNNNNNAGG	1 cut(s)	332
BstKTI	GATC	3 cut(s)	197, 525, 772
BstMAI	GTCTC	1 cut(s)	63
BstMBI	GATC	3 cut(s)	194, 522, 769
BstMCI	CGRYCG	1 cut(s)	185
BstMWI	GCNNNNNNNGC	1 cut(s)	722
BstNSI	RCATGY	1 cut(s)	729
BstSCI	CCNGG	1 cut(s)	760
BstSFI	CTRYAG	1 cut(s)	531
BstV1I	GCAGC	2 cut(s)	405, 734
BstXI	CCANNNNNNTGG	1 cut(s)	143
BsuI	GTATCC	4 cut(s)	35, 212, 386, 559
BsuRI	GGCC	2 cut(s)	408, 451
BtgI	CCRYGG	1 cut(s)	486
BtrI	CACGTC	1 cut(s)	382
BtsIMutI	CAGTG	1 cut(s)	230
Cac8I	GCNNGC	1 cut(s)	727
CaiI	CAGNNNCTG	1 cut(s)	716
Csp6I	GTAC	2 cut(s)	431, 617
CviAII	CATG	5 cut(s)	121, 247, 364, 487, 726
CviQI	GTAC	2 cut(s)	431, 617
DdeI	CTNAG	2 cut(s)	415, 628
DpnI	GATC	3 cut(s)	196, 524, 771
DpnII	GATC	3 cut(s)	194, 522, 769
DrdI	GACNNNNNNGTC	2 cut(s)	232, 356
DseDI	GACNNNNNNGTC	2 cut(s)	232, 356
Eam1104I	CTCTTC	1 cut(s)	603
EarI	CTCTTC	1 cut(s)	603
Eco130I	CCWWGG	2 cut(s)	452, 486
Eco57I	CTGAAG	1 cut(s)	32
Eco72I	CACGTG	1 cut(s)	303
EcoNI	CCTNNNNNAGG	1 cut(s)	332
EcoT14I	CCWWGG	2 cut(s)	452, 486
ErhI	CCWWGG	2 cut(s)	452, 486
FaeI	CATG	5 cut(s)	124, 250, 367, 490, 729
FalI	AAGNNNNNCTT	2 cut(s)	335, 367
FatI	CATG	5 cut(s)	120, 246, 363, 486, 725
Fnu4HI	GCNGC	3 cut(s)	318, 394, 723
Fsp4HI	GCNGC	3 cut(s)	318, 394, 723
GluI	GCNGC	3 cut(s)	318, 394, 723
GsuI	CTGGAG	1 cut(s)	108
HaeIII	GGCC	2 cut(s)	408, 451
HapII	CCGG	1 cut(s)	762
Hin1II	CATG	5 cut(s)	124, 250, 367, 490, 729
HincII	GTYRAC	2 cut(s)	205, 340
HindII	GTYRAC	2 cut(s)	205, 340
HindIII	AAGCTT	1 cut(s)	112
HpaI	GTTAAC	1 cut(s)	205
HpaII	CCGG	1 cut(s)	762
HphI	GGTGA	2 cut(s)	317, 652
Hpy166II	GTNNAC	4 cut(s)	205, 267, 340, 493
Hpy188I	TCNGA	2 cut(s)	69, 664
Hpy188III	TCNNGA	6 cut(s)	127, 192, 331, 630, 686, 773
Hpy8I	GTNNAC	4 cut(s)	205, 267, 340, 493
Hpy99I	CGWCG	1 cut(s)	386
HpyAV	CCTTC	5 cut(s)	10, 86, 328, 485, 509
HpyCH4III	ACNGT	4 cut(s)	186, 234, 542, 706
HpyCH4IV	ACGT	4 cut(s)	240, 302, 381, 795
HpyCH4V	TGCA	8 cut(s)	215, 363, 425, 533, 710, 722, 729, 785
HpyF10VI	GCNNNNNNNGC	1 cut(s)	722
HpyF3I	CTNAG	2 cut(s)	415, 628
HpySE526I	ACGT	4 cut(s)	240, 302, 381, 795
Hsp92II	CATG	5 cut(s)	124, 250, 367, 490, 729
KspAI	GTTAAC	1 cut(s)	205
Kzo9I	GATC	3 cut(s)	194, 522, 769
LguI	GCTCTTC	1 cut(s)	603
Lsp1109I	GCAGC	2 cut(s)	405, 734
MaeII	ACGT	4 cut(s)	240, 302, 381, 795
MalI	GATC	3 cut(s)	196, 524, 771
MboI	GATC	3 cut(s)	194, 522, 769
MboII	GAAGA	4 cut(s)	25, 620, 658, 661
MfeI	CAATTG	1 cut(s)	252
MluCI	AATT	4 cut(s)	130, 252, 321, 481
MnlI	CCTC	7 cut(s)	290, 297, 338, 461, 505, 631, 706
MroXI	GAANNNNTTC	1 cut(s)	115
MseI	TTAA	3 cut(s)	24, 170, 204
MslI	CAYNNNNRTG	1 cut(s)	141
MspI	CCGG	1 cut(s)	762
MspR9I	CCNGG	1 cut(s)	762
MunI	CAATTG	1 cut(s)	252
MwoI	GCNNNNNNNGC	1 cut(s)	722
NciI	CCSGG	1 cut(s)	762
NcoI	CCATGG	1 cut(s)	486
NdeII	GATC	3 cut(s)	194, 522, 769
NlaIII	CATG	5 cut(s)	124, 250, 367, 490, 729
NspI	RCATGY	1 cut(s)	729
PaeI	GCATGC	1 cut(s)	729
PciSI	GCTCTTC	1 cut(s)	603
PdmI	GAANNNNTTC	1 cut(s)	115
PkrI	GCNGC	3 cut(s)	319, 395, 724
PmaCI	CACGTG	1 cut(s)	303
PmlI	CACGTG	1 cut(s)	303
Ppu21I	YACGTR	1 cut(s)	303
Psp1406I	AACGTT	2 cut(s)	240, 795
PspCI	CACGTG	1 cut(s)	303
PstI	CTGCAG	1 cut(s)	535
PstNI	CAGNNNCTG	1 cut(s)	716
RsaI	GTAC	2 cut(s)	432, 618
RsaNI	GTAC	2 cut(s)	431, 617
RseI	CAYNNNNRTG	1 cut(s)	141
SapI	GCTCTTC	1 cut(s)	603
SaqAI	TTAA	3 cut(s)	24, 170, 204
SatI	GCNGC	3 cut(s)	318, 394, 723
Sau3AI	GATC	3 cut(s)	194, 522, 769
ScrFI	CCNGG	1 cut(s)	762
SfcI	CTRYAG	1 cut(s)	531
SmiMI	CAYNNNNRTG	1 cut(s)	141
SphI	GCATGC	1 cut(s)	729
Sse9I	AATT	4 cut(s)	130, 252, 321, 481
SsiI	CCGC	3 cut(s)	257, 318, 419
StyD4I	CCNGG	1 cut(s)	760
StyI	CCWWGG	2 cut(s)	452, 486
TaaI	ACNGT	4 cut(s)	186, 234, 542, 706
TaiI	ACGT	4 cut(s)	243, 305, 384, 798
TaqI	TCGA	2 cut(s)	181, 466
TasI	AATT	4 cut(s)	130, 252, 321, 481
TatI	WGTACW	1 cut(s)	616
TauI	GCSGC	1 cut(s)	320
Tru1I	TTAA	3 cut(s)	24, 170, 204
Tru9I	TTAA	3 cut(s)	24, 170, 204
TscAI	CASTG	1 cut(s)	237
TseI	GCWGC	2 cut(s)	393, 722
TspDTI	ATGAA	3 cut(s)	327, 659, 668
TspRI	CASTG	1 cut(s)	237
XagI	CCTNNNNNAGG	1 cut(s)	332
XapI	RAATTY	1 cut(s)	481
XceI	RCATGY	1 cut(s)	729
XcmI	CCANNNNNNNNNTGG	1 cut(s)	386
XmnI	GAANNNNTTC	1 cut(s)	115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.