Prupe.4G100800_v2.0.a1

Alpha N-terminal protein methyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
5139799 .. 5140083
285 bp
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UTR
Exon/CDS
Intron
Prupe.4G100800.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 237 bp
ATGGAGAAAGGTGGGTTACACTCTGCCGGCCGAGAATTCAAGAACGCAAAGGAGATGTGGAGAGAGCAGGTCGGAGAAGACCAGAGCAAGAAGACTGAATGGTACCGTCAAGGCGTTGGCTACTGGGAAAGTCAGGACCTTAGAATTCCTGCTCTGATACCATGCAGGAAAAGTTTACAAAGACTCGAGCATATATATACACAAGAAGAGAAGAAACAGACTTCAATATCTCCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

79

Amino Acids

9.24

Weight (kDa)

8.79

Isoelectric Point (pI)

46.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 58
Acc65I GGTACC 1 cut(s) 102
AccB1I GGYRCC 1 cut(s) 102
AcoI YGGCCR 1 cut(s) 28
AcsI RAATTY 2 cut(s) 35, 144
AfaI GTAC 1 cut(s) 104
AgsI TTSAA 2 cut(s) 40, 225
Ama87I CYCGRG 1 cut(s) 185
AoxI GGCC 1 cut(s) 28
ApoI RAATTY 2 cut(s) 35, 144
Asp718I GGTACC 1 cut(s) 102
AspS9I GGNCC 1 cut(s) 136
AvaI CYCGRG 1 cut(s) 185
AvaII GGWCC 1 cut(s) 136
BanI GGYRCC 1 cut(s) 102
BbsI GAAGAC 2 cut(s) 84, 98
BfuAI ACCTGC 1 cut(s) 58
Bme18I GGWCC 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 185
BmgT120I GGNCC 1 cut(s) 136
BmiI GGNNCC 1 cut(s) 104
BmrI ACTGGG 1 cut(s) 133
BmuI ACTGGG 1 cut(s) 133
BpiI GAAGAC 2 cut(s) 84, 98
Bse118I RCCGGY 1 cut(s) 26
Bse1I ACTGG 1 cut(s) 128
BseNI ACTGG 1 cut(s) 128
BseX3I CGGCCG 1 cut(s) 28
Bsh1285I CGRYCG 1 cut(s) 31
BshFI GGCC 1 cut(s) 30
BshNI GGYRCC 1 cut(s) 102
BsiEI CGRYCG 1 cut(s) 31
BsiHKCI CYCGRG 1 cut(s) 185
BsiSI CCGG 1 cut(s) 27
BsnI GGCC 1 cut(s) 30
BsoBI CYCGRG 1 cut(s) 185
BspANI GGCC 1 cut(s) 30
BspLI GGNNCC 1 cut(s) 104
BspMI ACCTGC 1 cut(s) 58
BspT107I GGYRCC 1 cut(s) 102
BsrFI RCCGGY 1 cut(s) 26
BsrI ACTGG 1 cut(s) 128
BssAI RCCGGY 1 cut(s) 26
Bst4CI ACNGT 1 cut(s) 107
Bst6I CTCTTC 1 cut(s) 201
BstC8I GCNNGC 1 cut(s) 28
BstDEI CTNAG 1 cut(s) 140
BstMCI CGRYCG 1 cut(s) 31
BstV2I GAAGAC 2 cut(s) 84, 98
BstZI CGGCCG 1 cut(s) 28
BsuRI GGCC 1 cut(s) 30
BveI ACCTGC 1 cut(s) 58
Cac8I GCNNGC 1 cut(s) 28
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 1 cut(s) 136
Csp6I GTAC 1 cut(s) 103
CviAII CATG 1 cut(s) 162
CviJI RGCY 2 cut(s) 30, 120
CviKI_1 RGCY 2 cut(s) 30, 120
CviQI GTAC 1 cut(s) 103
DdeI CTNAG 1 cut(s) 140
EaeI YGGCCR 1 cut(s) 28
EagI CGGCCG 1 cut(s) 28
Eam1104I CTCTTC 1 cut(s) 201
EarI CTCTTC 1 cut(s) 201
EclXI CGGCCG 1 cut(s) 28
Eco47I GGWCC 1 cut(s) 136
Eco52I CGGCCG 1 cut(s) 28
Eco88I CYCGRG 1 cut(s) 185
EcoO109I RGGNCCY 1 cut(s) 136
EcoRI GAATTC 2 cut(s) 35, 144
FaeI CATG 1 cut(s) 165
FaiI YATR 5 cut(s) 163, 192, 194, 196, 198
FatI CATG 1 cut(s) 161
HaeIII GGCC 1 cut(s) 30
HapII CCGG 1 cut(s) 27
Hin1II CATG 1 cut(s) 165
HinfI GANTC 1 cut(s) 183
HpaII CCGG 1 cut(s) 27
Hpy166II GTNNAC 1 cut(s) 176
Hpy188I TCNGA 2 cut(s) 74, 156
Hpy188III TCNNGA 2 cut(s) 40, 134
Hpy8I GTNNAC 1 cut(s) 176
HpyCH4III ACNGT 1 cut(s) 107
HpyCH4V TGCA 1 cut(s) 165
HpyF3I CTNAG 1 cut(s) 140
Hsp92II CATG 1 cut(s) 165
KpnI GGTACC 1 cut(s) 106
KroI GCCGGC 1 cut(s) 26
KroNI GCCGGC 1 cut(s) 28
LpnPI CCDG 7 cut(s) 40, 53, 95, 109, 119, 151, 162
MaeIII GTNAC 1 cut(s) 15
MboII GAAGA 4 cut(s) 89, 103, 218, 223
MluCI AATT 2 cut(s) 35, 144
MlyI GAGTC 1 cut(s) 177
MmeI TCCRAC 1 cut(s) 52
MroNI GCCGGC 1 cut(s) 26
MspI CCGG 1 cut(s) 27
NaeI GCCGGC 1 cut(s) 28
NgoMIV GCCGGC 1 cut(s) 26
NlaIII CATG 1 cut(s) 165
NlaIV GGNNCC 1 cut(s) 104
NmeAIII GCCGAG 1 cut(s) 56
PaeR7I CTCGAG 1 cut(s) 185
PdiI GCCGGC 1 cut(s) 28
PleI GAGTC 1 cut(s) 177
PpsI GAGTC 1 cut(s) 177
PpuMI RGGWCCY 1 cut(s) 136
Psp5II RGGWCCY 1 cut(s) 136
PspN4I GGNNCC 1 cut(s) 104
PspPI GGNCC 1 cut(s) 136
PspPPI RGGWCCY 1 cut(s) 136
PspXI VCTCGAGB 1 cut(s) 185
RsaI GTAC 1 cut(s) 104
RsaNI GTAC 1 cut(s) 103
Sau96I GGNCC 1 cut(s) 136
SchI GAGTC 1 cut(s) 177
SetI ASST 3 cut(s) 13, 72, 141
Sfr274I CTCGAG 1 cut(s) 185
SinI GGWCC 1 cut(s) 136
SlaI CTCGAG 1 cut(s) 185
SmlI CTYRAG 1 cut(s) 185
SmoI CTYRAG 1 cut(s) 185
Sse9I AATT 2 cut(s) 35, 144
TaaI ACNGT 1 cut(s) 107
TaqI TCGA 1 cut(s) 186
TasI AATT 2 cut(s) 35, 144
VpaK11BI GGWCC 1 cut(s) 136
XapI RAATTY 2 cut(s) 35, 144
XhoI CTCGAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.