Prupe.4G115700_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Forward (+)
6256326 .. 6256891
566 bp
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UTR
Exon/CDS
Intron
Prupe.4G115700.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 483 bp
ATGTTCATTCTAGGCAGGAAAAGGAAAGTGGAAGTTGCAACAGAGACTGCCTTGTTGCCTCAACTTATTTGGAGAAGAGTTTCACACGTAGAACTTCTATGGGCGACGGATGGATTTCATGAAAGCAACTTACTTGGCACTGGGGGTTTTGGCTCAGTATACAAAGGTACAATTTCAGATGGGATAGATGTTGCTGTAATGGTTTTCAATTTACAGATTGAAGGGGCTTTCGAGAGTTTTGATAGTGAATGTGATGTGCTGAGCAATATTGTCACCGAAATCTTATCAAAATCATCAGTTGTTGCAGTCAACCTGATTTCAAAGCCTTGGTTGAATATAATGACAGATGCATCCGCATTGGAATACCTTCATCATGGTCATGGTCCAAATCATGTTTTCCATTGTGATGTGAAGCCAATCAATATATTACTTGATGATGATATGGTTGCACATGTTGCTGATTTTGGCATTGCAGACTCTTAG

Protein Analysis

161

Amino Acids

17.56

Weight (kDa)

4.93

Isoelectric Point (pI)

42.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 159
AciI CCGC 1 cut(s) 354
AfaI GTAC 1 cut(s) 169
AflIII ACRYGT 2 cut(s) 85, 451
AgsI TTSAA 4 cut(s) 208, 221, 321, 334
Alw26I GTCTC 1 cut(s) 38
AlwNI CAGNNNCTG 1 cut(s) 47
Asp700I GAANNNNTTC 2 cut(s) 79, 366
AspS9I GGNCC 1 cut(s) 383
AsuHPI GGTGA 1 cut(s) 265
AvaII GGWCC 1 cut(s) 383
BccI CCATC 2 cut(s) 104, 173
BcoDI GTCTC 1 cut(s) 38
BfaI CTAG 1 cut(s) 11
BlpI GCTNAGC 1 cut(s) 260
Bme18I GGWCC 1 cut(s) 383
BmgT120I GGNCC 1 cut(s) 383
BmrI ACTGGG 1 cut(s) 150
BmsI GCATC 2 cut(s) 337, 359
BmuI ACTGGG 1 cut(s) 150
Bpu1102I GCTNAGC 1 cut(s) 260
BsaAI YACGTR 1 cut(s) 88
BsaJI CCNNGG 1 cut(s) 326
Bse1I ACTGG 1 cut(s) 145
Bse3DI GCAATG 1 cut(s) 468
BseDI CCNNGG 1 cut(s) 326
BseGI GGATG 2 cut(s) 115, 350
BseMI GCAATG 1 cut(s) 468
BseMII CTCAG 2 cut(s) 168, 251
BseNI ACTGG 1 cut(s) 145
BsmAI GTCTC 1 cut(s) 38
Bsp1720I GCTNAGC 1 cut(s) 260
BspACI CCGC 1 cut(s) 354
BspCNI CTCAG 2 cut(s) 167, 252
BspHI TCATGA 1 cut(s) 118
BsrDI GCAATG 1 cut(s) 468
BsrI ACTGG 1 cut(s) 145
BssECI CCNNGG 1 cut(s) 326
BssNAI GTATAC 1 cut(s) 160
BssT1I CCWWGG 1 cut(s) 326
Bst1107I GTATAC 1 cut(s) 160
Bst6I CTCTTC 1 cut(s) 70
BstAPI GCANNNNNTGC 1 cut(s) 455
BstBAI YACGTR 1 cut(s) 88
BstDEI CTNAG 3 cut(s) 154, 260, 480
BstF5I GGATG 2 cut(s) 115, 350
BstMAI GTCTC 1 cut(s) 38
BstMWI GCNNNNNNNGC 1 cut(s) 455
BstNSI RCATGY 1 cut(s) 455
BstZ17I GTATAC 1 cut(s) 160
BtsCI GGATG 2 cut(s) 115, 350
BtsIMutI CAGTG 1 cut(s) 138
CaiI CAGNNNCTG 1 cut(s) 47
CciI TCATGA 1 cut(s) 118
Cfr13I GGNCC 1 cut(s) 383
Csp6I GTAC 1 cut(s) 168
CviAII CATG 5 cut(s) 119, 374, 380, 392, 452
CviJI RGCY 4 cut(s) 153, 227, 325, 415
CviKI_1 RGCY 4 cut(s) 153, 227, 325, 415
CviQI GTAC 1 cut(s) 168
DdeI CTNAG 3 cut(s) 154, 260, 480
Eam1104I CTCTTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 70
Eco130I CCWWGG 1 cut(s) 326
Eco47I GGWCC 1 cut(s) 383
EcoT14I CCWWGG 1 cut(s) 326
EcoT22I ATGCAT 1 cut(s) 352
ErhI CCWWGG 1 cut(s) 326
FaeI CATG 5 cut(s) 122, 377, 383, 395, 455
FatI CATG 5 cut(s) 118, 373, 379, 391, 451
FblI GTMKAC 1 cut(s) 159
FokI GGATG 2 cut(s) 122, 337
FspBI CTAG 1 cut(s) 11
Hin1II CATG 5 cut(s) 122, 377, 383, 395, 455
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HinfI GANTC 1 cut(s) 476
HphI GGTGA 1 cut(s) 265
Hpy166II GTNNAC 2 cut(s) 160, 310
Hpy188I TCNGA 1 cut(s) 178
Hpy188III TCNNGA 2 cut(s) 119, 232
Hpy8I GTNNAC 2 cut(s) 160, 310
Hpy99I CGWCG 1 cut(s) 109
HpyAV CCTTC 2 cut(s) 215, 377
HpyCH4IV ACGT 1 cut(s) 87
HpyCH4V TGCA 5 cut(s) 38, 305, 350, 449, 473
HpyF10VI GCNNNNNNNGC 1 cut(s) 455
HpyF3I CTNAG 3 cut(s) 154, 260, 480
HpySE526I ACGT 1 cut(s) 87
Hsp92II CATG 5 cut(s) 122, 377, 383, 395, 455
LpnPI CCDG 2 cut(s) 126, 326
LweI GCATC 2 cut(s) 337, 359
MaeI CTAG 1 cut(s) 11
MaeII ACGT 1 cut(s) 87
MaeIII GTNAC 1 cut(s) 271
MboII GAAGA 1 cut(s) 87
MluCI AATT 2 cut(s) 171, 208
MlyI GAGTC 1 cut(s) 470
MnlI CCTC 1 cut(s) 69
Mph1103I ATGCAT 1 cut(s) 352
MroXI GAANNNNTTC 2 cut(s) 79, 366
MslI CAYNNNNRTG 2 cut(s) 378, 405
MwoI GCNNNNNNNGC 1 cut(s) 455
NlaIII CATG 5 cut(s) 122, 377, 383, 395, 455
NmuCI GTSAC 1 cut(s) 271
NsiI ATGCAT 1 cut(s) 352
NspI RCATGY 1 cut(s) 455
PagI TCATGA 1 cut(s) 118
PciI ACATGT 1 cut(s) 451
PdmI GAANNNNTTC 2 cut(s) 79, 366
PleI GAGTC 1 cut(s) 470
PpsI GAGTC 1 cut(s) 470
Ppu21I YACGTR 1 cut(s) 88
PscI ACATGT 1 cut(s) 451
PspPI GGNCC 1 cut(s) 383
PstNI CAGNNNCTG 1 cut(s) 47
RsaI GTAC 1 cut(s) 169
RsaNI GTAC 1 cut(s) 168
RseI CAYNNNNRTG 2 cut(s) 378, 405
Sau96I GGNCC 1 cut(s) 383
SchI GAGTC 1 cut(s) 470
SetI ASST 4 cut(s) 90, 169, 315, 369
SfaNI GCATC 2 cut(s) 337, 359
SinI GGWCC 1 cut(s) 383
SmiMI CAYNNNNRTG 2 cut(s) 378, 405
Sse9I AATT 2 cut(s) 171, 208
SsiI CCGC 1 cut(s) 354
SspI AATATT 1 cut(s) 268
SspMI CTAG 1 cut(s) 11
StyI CCWWGG 1 cut(s) 326
TaiI ACGT 1 cut(s) 90
TaqI TCGA 1 cut(s) 231
TasI AATT 2 cut(s) 171, 208
TscAI CASTG 1 cut(s) 145
TseFI GTSAC 1 cut(s) 271
Tsp45I GTSAC 1 cut(s) 271
TspDTI ATGAA 3 cut(s) 107, 135, 359
TspGWI ACGGA 1 cut(s) 122
TspRI CASTG 1 cut(s) 145
VpaK11BI GGWCC 1 cut(s) 383
XceI RCATGY 1 cut(s) 455
XmiI GTMKAC 1 cut(s) 159
XmnI GAANNNNTTC 2 cut(s) 79, 366
XspI CTAG 1 cut(s) 11
Zsp2I ATGCAT 1 cut(s) 352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.