Prupe.4G117700_v2.0.a1
ERF Family

Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Forward (+)
6371649 .. 6373692
2044 bp
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UTR
Exon/CDS
Intron
Prupe.4G117700.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 465 bp
ATGGGAGCAGAAGCACACCCAATACAAAAGAGAGTTTTATGTATGAATAAGATTGATTTAGTTGGGAAGAAGAAAGATTTATTAACAGTTGCCGAGCAATTCAAAGATCTTCCTGGGTATGAAAGTCTGAGTTTTTTTTCTTTTTTAACATATAATTTTTTATTTATGAGAGTGAGCCTTGGGTACAAGGATAAGGCTGTCAAAAGATCTTGGGAGGAAGATCCATTCATCATGACTGAGGAAGTAATGAAGAATATATCATTAGAAGTTGTCCGAGAAAGGCTGTTAGGACATGTCCATCAGGAAATCCCATACGGTATTGAACATCGGTTGATGGACTGGAAGGAGTTGCGAGATGGCTCTCTTCGGATTGAACAGTATCTTATCACTCCCAAAATTAAGAGAATAGGCATGGAAGCTAATGAGGAGCTAAGGTCCATCTTCAAGAGGGATTACTCAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

155

Amino Acids

18.26

Weight (kDa)

8.57

Isoelectric Point (pI)

44.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 215
AfaI GTAC 1 cut(s) 185
AflIII ACRYGT 1 cut(s) 292
AgsI TTSAA 4 cut(s) 103, 323, 374, 445
AjnI CCWGG 1 cut(s) 112
AluBI AGCT 2 cut(s) 419, 430
AluI AGCT 2 cut(s) 419, 430
AlwI GGATC 1 cut(s) 215
AspS9I GGNCC 1 cut(s) 435
AvaII GGWCC 1 cut(s) 435
BccI CCATC 4 cut(s) 306, 328, 350, 446
BciT130I CCWGG 1 cut(s) 114
BglII AGATCT 2 cut(s) 106, 206
Bme1390I CCNGG 1 cut(s) 114
Bme18I GGWCC 1 cut(s) 435
BmgT120I GGNCC 1 cut(s) 435
BmrFI CCNGG 1 cut(s) 114
Bpu10I CCTNAGC 1 cut(s) 431
BsaJI CCNNGG 2 cut(s) 113, 178
BsaXI ACNNNNNCTCC 2 cut(s) 419, 449
Bse1I ACTGG 1 cut(s) 344
BseBI CCWGG 1 cut(s) 114
BseDI CCNNGG 2 cut(s) 113, 178
BseMII CTCAG 2 cut(s) 119, 228
BseNI ACTGG 1 cut(s) 344
BseRI GAGGAG 1 cut(s) 440
Bsp143I GATC 3 cut(s) 106, 206, 220
BspCNI CTCAG 2 cut(s) 120, 229
BspHI TCATGA 1 cut(s) 231
BspPI GGATC 1 cut(s) 215
BsrI ACTGG 1 cut(s) 344
BssECI CCNNGG 2 cut(s) 113, 178
BssMI GATC 3 cut(s) 106, 206, 220
BssT1I CCWWGG 1 cut(s) 178
Bst2UI CCWGG 1 cut(s) 114
Bst4CI ACNGT 3 cut(s) 88, 317, 378
Bst6I CTCTTC 1 cut(s) 369
BstDEI CTNAG 3 cut(s) 128, 237, 431
BstKTI GATC 3 cut(s) 109, 209, 223
BstMBI GATC 3 cut(s) 106, 206, 220
BstNI CCWGG 1 cut(s) 114
BstNSI RCATGY 1 cut(s) 296
BstSCI CCNGG 1 cut(s) 112
BstX2I RGATCY 3 cut(s) 106, 206, 220
BstYI RGATCY 3 cut(s) 106, 206, 220
CciI TCATGA 1 cut(s) 231
Cfr13I GGNCC 1 cut(s) 435
Csp6I GTAC 1 cut(s) 184
CviAII CATG 3 cut(s) 232, 293, 412
CviJI RGCY 6 cut(s) 177, 197, 283, 360, 419, 430
CviKI_1 RGCY 6 cut(s) 177, 197, 283, 360, 419, 430
CviQI GTAC 1 cut(s) 184
DdeI CTNAG 3 cut(s) 128, 237, 431
DpnI GATC 3 cut(s) 108, 208, 222
DpnII GATC 3 cut(s) 106, 206, 220
Eam1104I CTCTTC 1 cut(s) 369
EarI CTCTTC 1 cut(s) 369
Eco130I CCWWGG 1 cut(s) 178
Eco47I GGWCC 1 cut(s) 435
EcoRII CCWGG 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 178
ErhI CCWWGG 1 cut(s) 178
FaeI CATG 3 cut(s) 235, 296, 415
FatI CATG 3 cut(s) 231, 292, 411
Hin1II CATG 3 cut(s) 235, 296, 415
Hpy188I TCNGA 3 cut(s) 129, 275, 369
Hpy188III TCNNGA 3 cut(s) 232, 302, 445
HpyAV CCTTC 1 cut(s) 337
HpyCH4III ACNGT 3 cut(s) 88, 317, 378
HpyF3I CTNAG 3 cut(s) 128, 237, 431
Hsp92II CATG 3 cut(s) 235, 296, 415
Kzo9I GATC 3 cut(s) 106, 206, 220
LmnI GCTCC 2 cut(s) 5, 427
LpnPI CCDG 4 cut(s) 99, 126, 287, 325
MalI GATC 3 cut(s) 108, 208, 222
MboI GATC 3 cut(s) 106, 206, 220
MboII GAAGA 7 cut(s) 79, 82, 101, 230, 262, 356, 433
MflI RGATCY 3 cut(s) 106, 206, 220
MluCI AATT 3 cut(s) 98, 154, 396
MnlI CCTC 4 cut(s) 208, 232, 418, 441
MseI TTAA 3 cut(s) 83, 146, 399
MspR9I CCNGG 1 cut(s) 114
MvaI CCWGG 1 cut(s) 114
NdeII GATC 3 cut(s) 106, 206, 220
NlaIII CATG 3 cut(s) 235, 296, 415
NmeAIII GCCGAG 1 cut(s) 118
NspI RCATGY 1 cut(s) 296
PagI TCATGA 1 cut(s) 231
PciI ACATGT 1 cut(s) 292
PscI ACATGT 1 cut(s) 292
Psp6I CCWGG 1 cut(s) 112
PspGI CCWGG 1 cut(s) 112
PspPI GGNCC 1 cut(s) 435
PsuI RGATCY 3 cut(s) 106, 206, 220
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
SaqAI TTAA 3 cut(s) 83, 146, 399
Sau3AI GATC 3 cut(s) 106, 206, 220
Sau96I GGNCC 1 cut(s) 435
ScrFI CCNGG 1 cut(s) 114
SetI ASST 3 cut(s) 421, 432, 437
SinI GGWCC 1 cut(s) 435
Sse9I AATT 3 cut(s) 98, 154, 396
StyD4I CCNGG 1 cut(s) 112
StyI CCWWGG 1 cut(s) 178
TaaI ACNGT 3 cut(s) 88, 317, 378
TasI AATT 3 cut(s) 98, 154, 396
Tru1I TTAA 3 cut(s) 83, 146, 399
Tru9I TTAA 3 cut(s) 83, 146, 399
TspDTI ATGAA 4 cut(s) 59, 135, 217, 263
VpaK11BI GGWCC 1 cut(s) 435
XceI RCATGY 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.