Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

7006283 .. 7007473

Gene Structure 1191 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G127400.1_v2.0.a1.CDS.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1065 bp

ATGGCAATAGCTAGCCTAGAATTCTGTTTCTCTCTACAAGCATCCATGTGCACCAAGCACATGGATGATCCAACATCTCCTCTACCTCCTTCCAATTACTCTGAGCCAGAAAATCTAAGTCCCAACACAAAAAATTTCCAATCCCTCAACAAAATGACTGAGCAAAGTCTTGTGGCATTCAACTGGGCACAACTCTTCCAATCCATTGTGGTGTCATTGGCTTGGGTTTCTCTGCTTGGGCATTGGAATGGCCCTGCCTCAGAGACCACCATATCAGAATGGTCCCTTGAATGTGCTAGCTCATTCATCACAGGCCTACCTGCCTCATCTTTCTTCATGGGGTGCCTTATAGGTGGCCTTATCCTAGGCACACTTGCTGATTCATCGCTCGGCCGCAAGAACCTGCTCTTGATCTCATGCCTGATCATGTCTGTTGCTGCACTCATAACCAGCTTCGCCAACAACATTTGGACCTACTCTGCCCTGAGATTTATATCCGGGTTTGGCTGCGCATCGATTGGGACATGTGCCCTTGTTTTGCTAACAGAAAAGGTAGGTGAACAATGGAGAGGAAGAGTAGGAATCCTGGGATTCTTTTTCTTTACCTGTGGTTTTTTGTCCTTGCCACTTATAGCATACATAAATAGATTTTCTATTTGGAGAGTTCTGTATCTTTGGACATCAATTCCAGGCATCTTTTACTGCTCATTGCTTCATTTTTTTTGTCACCGAGTCCCCAAGATGGCTCTTCATGCGCAGCTTCGAGGACGAAGCAATGTCACAGTGGAAGACGAGCTTGACCGTGTACTTGCTAAGCTTGCCCATGAGCAAGAAAACAAAAATCACCCCAAAACTACAACTATATTCTCATCTATGAAGACACTTTTTGAGAAAACATGGGCATTTAAAAGAATATTGGCTGTTATAACACTTGGAACTGGCATTGGATTGGTCTACTATGGCATGCCATTTGGGGTTGGAAACTTAGGATTTAACATCTACCTTAGTGTAATGTTCAATGCCCTATCTGAAATACCTTCATATTTTGTCACATATATGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006970 GO:0007154 GO:0008150 GO:0008509 GO:0008514 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009705 GO:0009987 GO:0009991 GO:0010035 GO:0015075 GO:0015711 GO:0016020 GO:0016021 GO:0022857 GO:0031090 GO:0031224 GO:0031668 GO:0033554 GO:0034220 GO:0042221 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0070417 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071470 GO:0071472 GO:0071496 GO:0071702 GO:0098588 GO:0098656 GO:0098805 GO:0104004 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko05231 map05231

Pfam Domains

Protein Families

MFS_1 Sugar_tr

Protein Analysis

355

Amino Acids

39.31

Weight (kDa)

8.3

Isoelectric Point (pI)

45.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	926
Acc16I	TGCGCA	2 cut(s)	511, 756
Acc36I	ACCTGC	2 cut(s)	328, 411
AccB1I	GGYRCC	1 cut(s)	342
AccI	GTMKAC	1 cut(s)	954
AciI	CCGC	1 cut(s)	394
AclWI	GGATC	1 cut(s)	62
AcoI	YGGCCR	1 cut(s)	391
AcsI	RAATTY	2 cut(s)	20, 133
AfaI	GTAC	1 cut(s)	807
AfiI	CCNNNNNNNGG	1 cut(s)	742
AflIII	ACRYGT	1 cut(s)	524
AgsI	TTSAA	3 cut(s)	181, 290, 1018
AjnI	CCWGG	2 cut(s)	585, 688
AluBI	AGCT	6 cut(s)	11, 300, 453, 760, 796, 817
AluI	AGCT	6 cut(s)	11, 300, 453, 760, 796, 817
Alw21I	GWGCWC	1 cut(s)	53
Alw26I	GTCTC	1 cut(s)	257
Alw44I	GTGCAC	1 cut(s)	49
AlwI	GGATC	1 cut(s)	62
AoxI	GGCC	4 cut(s)	250, 313, 355, 391
ApaLI	GTGCAC	1 cut(s)	49
ApeKI	GCWGC	3 cut(s)	437, 507, 757
ApoI	RAATTY	2 cut(s)	20, 133
AspA2I	CCTAGG	1 cut(s)	364
AspLEI	GCGC	2 cut(s)	512, 757
AspS9I	GGNCC	3 cut(s)	251, 282, 471
AsuC2I	CCSGG	1 cut(s)	499
AsuHPI	GGTGA	3 cut(s)	569, 719, 836
AsuNHI	GCTAGC	2 cut(s)	11, 296
AvaII	GGWCC	2 cut(s)	282, 471
AvrII	CCTAGG	1 cut(s)	364
BaeGI	GKGCMC	3 cut(s)	53, 190, 532
BanI	GGYRCC	1 cut(s)	342
BbsI	GAAGAC	2 cut(s)	795, 884
Bbv12I	GWGCWC	1 cut(s)	53
BbvI	GCAGC	3 cut(s)	424, 494, 769
BccI	CCATC	1 cut(s)	736
BciT130I	CCWGG	2 cut(s)	587, 690
BclI	TGATCA	1 cut(s)	423
BcnI	CCSGG	1 cut(s)	499
BcoDI	GTCTC	1 cut(s)	257
BfaI	CTAG	4 cut(s)	12, 17, 297, 365
BfuAI	ACCTGC	2 cut(s)	328, 411
BisI	GCNGC	4 cut(s)	394, 438, 508, 758
BlnI	CCTAGG	1 cut(s)	364
BlpI	GCTNAGC	1 cut(s)	813
BlsI	GCNGC	4 cut(s)	395, 439, 509, 759
Bme1390I	CCNGG	3 cut(s)	499, 587, 690
Bme18I	GGWCC	2 cut(s)	282, 471
BmgT120I	GGNCC	3 cut(s)	251, 282, 471
BmiI	GGNNCC	2 cut(s)	284, 344
BmrFI	CCNGG	3 cut(s)	499, 587, 690
BmrI	ACTGGG	1 cut(s)	193
BmsI	GCATC	3 cut(s)	50, 521, 702
BmtI	GCTAGC	2 cut(s)	15, 300
BmuI	ACTGGG	1 cut(s)	193
BpiI	GAAGAC	2 cut(s)	795, 884
Bpu1102I	GCTNAGC	1 cut(s)	813
BpuMI	CCSGG	1 cut(s)	499
Bsa29I	ATCGAT	1 cut(s)	515
BsaBI	GATNNNNATC	1 cut(s)	493
BsaI	GGTCTC	1 cut(s)	257
BsaJI	CCNNGG	2 cut(s)	364, 586
Bsc4I	CCNNNNNNNGG	1 cut(s)	742
Bse1I	ACTGG	2 cut(s)	188, 943
Bse3DI	GCAATG	2 cut(s)	707, 781
Bse8I	GATNNNNATC	1 cut(s)	493
BseBI	CCWGG	2 cut(s)	587, 690
BseCI	ATCGAT	1 cut(s)	515
BseDI	CCNNGG	2 cut(s)	364, 586
BseGI	GGATG	2 cut(s)	41, 70
BseJI	GATNNNNATC	1 cut(s)	493
BseLI	CCNNNNNNNGG	1 cut(s)	742
BseMI	GCAATG	2 cut(s)	707, 781
BseMII	CTCAG	4 cut(s)	93, 150, 273, 476
BseNI	ACTGG	2 cut(s)	188, 943
BseRI	GAGGAG	1 cut(s)	69
BseSI	GKGCMC	3 cut(s)	53, 190, 532
BseX3I	CGGCCG	1 cut(s)	391
BseXI	GCAGC	3 cut(s)	424, 494, 769
BsgI	GTGCAG	1 cut(s)	423
Bsh1285I	CGRYCG	1 cut(s)	394
BshFI	GGCC	4 cut(s)	252, 315, 357, 393
BshNI	GGYRCC	1 cut(s)	342
BshVI	ATCGAT	1 cut(s)	515
BsiEI	CGRYCG	1 cut(s)	394
BsiHKAI	GWGCWC	1 cut(s)	53
BsiSI	CCGG	1 cut(s)	498
BslFI	GGGAC	4 cut(s)	105, 268, 535, 719
BslI	CCNNNNNNNGG	1 cut(s)	742
BsmAI	GTCTC	1 cut(s)	257
BsmFI	GGGAC	4 cut(s)	105, 268, 535, 719
BsmI	GAATGC	1 cut(s)	176
BsnI	GGCC	4 cut(s)	252, 315, 357, 393
Bso31I	GGTCTC	1 cut(s)	257
Bsp1286I	GDGCHC	3 cut(s)	53, 190, 532
Bsp143I	GATC	3 cut(s)	67, 411, 423
Bsp1720I	GCTNAGC	1 cut(s)	813
BspACI	CCGC	1 cut(s)	394
BspANI	GGCC	4 cut(s)	252, 315, 357, 393
BspCNI	CTCAG	4 cut(s)	94, 151, 272, 477
BspDI	ATCGAT	1 cut(s)	515
BspLI	GGNNCC	2 cut(s)	284, 344
BspMI	ACCTGC	2 cut(s)	328, 411
BspOI	GCTAGC	2 cut(s)	15, 300
BspPI	GGATC	1 cut(s)	62
BspQI	GCTCTTC	1 cut(s)	753
BspT107I	GGYRCC	1 cut(s)	342
BspTNI	GGTCTC	1 cut(s)	257
BsrDI	GCAATG	2 cut(s)	707, 781
BsrI	ACTGG	2 cut(s)	188, 943
BssECI	CCNNGG	2 cut(s)	364, 586
BssMI	GATC	3 cut(s)	67, 411, 423
BssT1I	CCWWGG	1 cut(s)	364
Bst2UI	CCWGG	2 cut(s)	587, 690
Bst4CI	ACNGT	2 cut(s)	784, 803
Bst6I	CTCTTC	3 cut(s)	200, 568, 753
BstC8I	GCNNGC	4 cut(s)	13, 298, 819, 965
BstDEI	CTNAG	8 cut(s)	102, 116, 159, 259, 485, 813, 985, 1004
BstF5I	GGATG	2 cut(s)	41, 70
BstHHI	GCGC	2 cut(s)	512, 757
BstKTI	GATC	3 cut(s)	70, 414, 426
BstMAI	GTCTC	1 cut(s)	257
BstMBI	GATC	3 cut(s)	67, 411, 423
BstMCI	CGRYCG	1 cut(s)	394
BstMWI	GCNNNNNNNGC	2 cut(s)	752, 818
BstNI	CCWGG	2 cut(s)	587, 690
BstNSI	RCATGY	2 cut(s)	528, 967
BstSCI	CCNGG	3 cut(s)	497, 585, 688
BstSLI	GKGCMC	3 cut(s)	53, 190, 532
BstV1I	GCAGC	3 cut(s)	424, 494, 769
BstV2I	GAAGAC	2 cut(s)	795, 884
BstXI	CCANNNNNNTGG	1 cut(s)	61
BstZI	CGGCCG	1 cut(s)	391
Bsu15I	ATCGAT	1 cut(s)	515
BsuRI	GGCC	4 cut(s)	252, 315, 357, 393
BsuTUI	ATCGAT	1 cut(s)	515
BtgZI	GCGATG	1 cut(s)	369
BtsCI	GGATG	2 cut(s)	41, 70
BtsIMutI	CAGTG	1 cut(s)	789
BveI	ACCTGC	2 cut(s)	328, 411
Cac8I	GCNNGC	4 cut(s)	13, 298, 819, 965
CfoI	GCGC	2 cut(s)	512, 757
Cfr13I	GGNCC	3 cut(s)	251, 282, 471
ClaI	ATCGAT	1 cut(s)	515
Csp6I	GTAC	1 cut(s)	806
CviQI	GTAC	1 cut(s)	806
DdeI	CTNAG	8 cut(s)	102, 116, 159, 259, 485, 813, 985, 1004
DpnI	GATC	3 cut(s)	69, 413, 425
DpnII	GATC	3 cut(s)	67, 411, 423
DraI	TTTAAA	1 cut(s)	907
EaeI	YGGCCR	1 cut(s)	391
EagI	CGGCCG	1 cut(s)	391
Eam1104I	CTCTTC	3 cut(s)	200, 568, 753
EarI	CTCTTC	3 cut(s)	200, 568, 753
EclXI	CGGCCG	1 cut(s)	391
Eco130I	CCWWGG	1 cut(s)	364
Eco147I	AGGCCT	1 cut(s)	315
Eco31I	GGTCTC	1 cut(s)	257
Eco47I	GGWCC	2 cut(s)	282, 471
Eco52I	CGGCCG	1 cut(s)	391
EcoRI	GAATTC	1 cut(s)	20
EcoRII	CCWGG	2 cut(s)	585, 688
EcoT14I	CCWWGG	1 cut(s)	364
ErhI	CCWWGG	1 cut(s)	364
FalI	AAGNNNNNCTT	2 cut(s)	780, 812
FaqI	GGGAC	4 cut(s)	105, 268, 535, 719
FbaI	TGATCA	1 cut(s)	423
FblI	GTMKAC	1 cut(s)	954
Fnu4HI	GCNGC	4 cut(s)	394, 438, 508, 758
FokI	GGATG	2 cut(s)	28, 77
Fsp4HI	GCNGC	4 cut(s)	394, 438, 508, 758
FspBI	CTAG	4 cut(s)	12, 17, 297, 365
FspI	TGCGCA	2 cut(s)	511, 756
GlaI	GCGC	2 cut(s)	511, 756
GluI	GCNGC	4 cut(s)	394, 438, 508, 758
HaeIII	GGCC	4 cut(s)	252, 315, 357, 393
HapII	CCGG	1 cut(s)	498
HhaI	GCGC	2 cut(s)	512, 757
Hin6I	GCGC	2 cut(s)	510, 755
HinP1I	GCGC	2 cut(s)	510, 755
HindIII	AAGCTT	1 cut(s)	815
HinfI	GANTC	4 cut(s)	380, 582, 591, 732
HpaII	CCGG	1 cut(s)	498
HphI	GGTGA	3 cut(s)	569, 719, 836
Hpy166II	GTNNAC	4 cut(s)	51, 560, 806, 955
Hpy188I	TCNGA	4 cut(s)	103, 262, 277, 1030
Hpy188III	TCNNGA	1 cut(s)	409
Hpy8I	GTNNAC	4 cut(s)	51, 560, 806, 955
HpyAV	CCTTC	2 cut(s)	99, 1047
HpyCH4III	ACNGT	2 cut(s)	784, 803
HpyCH4V	TGCA	2 cut(s)	51, 440
HpyF10VI	GCNNNNNNNGC	2 cut(s)	752, 818
HpyF3I	CTNAG	8 cut(s)	102, 116, 159, 259, 485, 813, 985, 1004
HspAI	GCGC	2 cut(s)	510, 755
Ksp22I	TGATCA	1 cut(s)	423
Kzo9I	GATC	3 cut(s)	67, 411, 423
LguI	GCTCTTC	1 cut(s)	753
Lsp1109I	GCAGC	3 cut(s)	424, 494, 769
LweI	GCATC	3 cut(s)	50, 521, 702
MaeI	CTAG	4 cut(s)	12, 17, 297, 365
MaeIII	GTNAC	3 cut(s)	725, 778, 1048
MalI	GATC	3 cut(s)	69, 413, 425
MboI	GATC	3 cut(s)	67, 411, 423
MboII	GAAGA	6 cut(s)	187, 325, 585, 740, 800, 889
MhlI	GDGCHC	3 cut(s)	53, 190, 532
MluCI	AATT	4 cut(s)	20, 94, 133, 684
MlyI	GAGTC	1 cut(s)	741
MmeI	TCCRAC	2 cut(s)	95, 958
MnlI	CCTC	7 cut(s)	90, 96, 155, 268, 334, 563, 758
MseI	TTAA	2 cut(s)	906, 993
MslI	CAYNNNNRTG	5 cut(s)	46, 63, 209, 246, 1055
MspI	CCGG	1 cut(s)	498
MspR9I	CCNGG	3 cut(s)	499, 587, 690
Mva1269I	GAATGC	1 cut(s)	176
MvaI	CCWGG	2 cut(s)	587, 690
MwoI	GCNNNNNNNGC	2 cut(s)	752, 818
NciI	CCSGG	1 cut(s)	499
NdeII	GATC	3 cut(s)	67, 411, 423
NheI	GCTAGC	2 cut(s)	11, 296
NlaIV	GGNNCC	2 cut(s)	284, 344
NmeAIII	GCCGAG	1 cut(s)	369
NmuCI	GTSAC	3 cut(s)	725, 778, 1048
NsbI	TGCGCA	2 cut(s)	511, 756
NspI	RCATGY	2 cut(s)	528, 967
PaeI	GCATGC	1 cut(s)	967
PceI	AGGCCT	1 cut(s)	315
PciI	ACATGT	1 cut(s)	524
PciSI	GCTCTTC	1 cut(s)	753
PctI	GAATGC	1 cut(s)	176
PfeI	GAWTC	3 cut(s)	380, 582, 591
PkrI	GCNGC	4 cut(s)	395, 439, 509, 759
PleI	GAGTC	1 cut(s)	740
PpsI	GAGTC	1 cut(s)	740
PscI	ACATGT	1 cut(s)	524
PsiI	TTATAA	1 cut(s)	926
Psp6I	CCWGG	2 cut(s)	585, 688
PspGI	CCWGG	2 cut(s)	585, 688
PspN4I	GGNNCC	2 cut(s)	284, 344
PspPI	GGNCC	3 cut(s)	251, 282, 471
RsaI	GTAC	1 cut(s)	807
RsaNI	GTAC	1 cut(s)	806
RseI	CAYNNNNRTG	5 cut(s)	46, 63, 209, 246, 1055
SapI	GCTCTTC	1 cut(s)	753
SaqAI	TTAA	2 cut(s)	906, 993
SatI	GCNGC	4 cut(s)	394, 438, 508, 758
Sau3AI	GATC	3 cut(s)	67, 411, 423
Sau96I	GGNCC	3 cut(s)	251, 282, 471
SchI	GAGTC	1 cut(s)	741
ScrFI	CCNGG	3 cut(s)	499, 587, 690
SduI	GDGCHC	3 cut(s)	53, 190, 532
SfaNI	GCATC	3 cut(s)	50, 521, 702
SinI	GGWCC	2 cut(s)	282, 471
SmiMI	CAYNNNNRTG	5 cut(s)	46, 63, 209, 246, 1055
SphI	GCATGC	1 cut(s)	967
Sse9I	AATT	4 cut(s)	20, 94, 133, 684
SseBI	AGGCCT	1 cut(s)	315
SsiI	CCGC	1 cut(s)	394
SspI	AATATT	1 cut(s)	915
SspMI	CTAG	4 cut(s)	12, 17, 297, 365
StuI	AGGCCT	1 cut(s)	315
StyD4I	CCNGG	3 cut(s)	497, 585, 688
StyI	CCWWGG	1 cut(s)	364
TaaI	ACNGT	2 cut(s)	784, 803
TaqI	TCGA	2 cut(s)	515, 763
TasI	AATT	4 cut(s)	20, 94, 133, 684
TatI	WGTACW	1 cut(s)	805
TauI	GCSGC	1 cut(s)	396
TfiI	GAWTC	3 cut(s)	380, 582, 591
Tru1I	TTAA	2 cut(s)	906, 993
Tru9I	TTAA	2 cut(s)	906, 993
TscAI	CASTG	1 cut(s)	789
TseFI	GTSAC	3 cut(s)	725, 778, 1048
TseI	GCWGC	3 cut(s)	437, 507, 757
Tsp45I	GTSAC	3 cut(s)	725, 778, 1048
TspDTI	ATGAA	7 cut(s)	295, 325, 372, 704, 740, 890, 1029
TspRI	CASTG	1 cut(s)	789
VneI	GTGCAC	1 cut(s)	49
VpaK11BI	GGWCC	2 cut(s)	282, 471
XapI	RAATTY	2 cut(s)	20, 133
XceI	RCATGY	2 cut(s)	528, 967
XmaJI	CCTAGG	1 cut(s)	364
XmiI	GTMKAC	1 cut(s)	954
XspI	CTAG	4 cut(s)	12, 17, 297, 365

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.