Prupe.4G130200_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
7186064 .. 7189888
3825 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G130200.1_v2.0.a1.CDS.5

Sequence Viewer

Length: 2091 bp
ATGCAACTTCTGGAATTAGTGTTGGAGAACAACAATTTCAGTGGAAGCATACCCAAAAATATGGGGAATTTGACCCAATTAATGGAGATTTATATTGCCTACAACAATTTGACAGCAATTTCGCTTGCTAGTAATCAGCTCTCAGGTAGCCTCCCAGCAGACATAGGGCTTAGACTTCCAAACCTAGAATTGCTATATATAGGAATGAATGAACTCAGTGGAGCCATTCCCAACTTTATCTCTAATAATGGTTCTAAGCTCACCAAGCTAGAAATGGGCGAAGCAAACTTCCTTTCTTGTTTGGCTAATCTTACAAATTTGCAGAGATTGACCTTGTCAAATAATCCATTAAATGACACTCTTCCTGTTTCCTTTGGGAATCTCTCCACATCACTTATATATCTAGAATTAAGAAATTGTAGCATGAGGGGTAAGATTCCTGATGATATCGGCAACTTAAGCAGCCTGATAGCCTTAGCTCTGGGAAACAATCAATTAACTGGCTTAATTCCAACCTCAGTGGGAAGACTTAGGAATCTCCAAGGTTTGTATTTGGATGCAGCACTAAGATATCTAATAATACAGTCCAATTTGCTAACTTCCACAATACCATCTACTCTATGGAGACTTGAATATATCTTGTTCCTAGGCTTGTCATACAATTTTCTAAACGGATCAATCTCAGAAGATATTGGAAAATTGAAAGCCGTCACAACTCTGGATTTATCAAACAACCAATTATCAGGTAGCATACCAAGCAGCATTGGGGGTCTTAAAAATGTGGTTCAACTCTCCTTGGCAAATAATAATTTACAAGGACCTATTCCTAGTTCCTTTGGGGAATTGGTAAGCCTAGGAGACTTGGTTTTATCCAAAAACAATCTCTCTGGACTGATTCCAAAGTCTCTACAAGTGCTCGTCCATCTCAAGTATCTGAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAACAGGAGGACCTTTTCAAAACCTCTTCTCTGAATCATTTGTCTCGAATAGTGCGCTCTGTGGTGCAGCCCGACTCCATGTTCCACCATGCAAAAATAATACACATAAACCAAATTCAAGGAAAGCTAGTCCATCCAACCTGAAATATCCTATTCCAGGGATCATATCAGCAATACTCCTGGTGGCCTCTGTATCAATGTTTATACTACGCAGGAAAAGGAAAATTGAAGGGGCTTTCAAGAGTTTTGATAGTGAATGTGATGTGCTGAGCAATATTCGTCACCGAAATCTTAACACAATCATCAGTTGTTGCAGTCAACCTGATTTCAAAGCCTTGGTACTACAATACATGCCTAATGGGAGTCTTGAGAAGTGGTTGTACTCTCAAAATCAAAACTCTCCTTTGAATATCCTACAAAGGTTGAATATAATGACAAATGTTGCATCGGCATTGGAATACCTTCATCATGAGTTTGGAATGGAAGGAATCATTTCAACCAGAGGAGATGTGTATAGTTTCGATATTGTACTAATGGAGACATTCACAAGAAGGAAGCCAACTGATGAAATGTTTGTTGGGGAGATGAATTTAAAGCAACGGATTGCAAATTCACTACTTCCAGATGCTGCAATTGTTGAAGTTGTTGATGCCGATTTACTTGGGACAGAGGAAGATGGTGATTTTGTATCGAATGGTGCGCTCTGTGGTGAAGCCCGACTCCATGTTCCACCATGCCAAAATAGTACACTTCAACCAAATTCAAGGAAAACCAGAACACCCAACTTGAAATATATTATTCCAGGGATCATATCAGCAATACTCCCGGTGGCCTCTGTATCAATGTTCATGCTGCGCAGGAAAAGGAAAGTGGAAGTTGCAACAGAGACTGTCTCATTACCTCGACTTCTTTGGAGAAGAGTTTCACACCTTGAACTTCTGAGGGCGATGAATGGATTTGATGAAAGCAACTTACTTGGCATTGGTGGTTTTGGCTCAGTATATAAAGATACAATTTCAGATGGGATAGATGTTGCTGTAAAGGTTTTCAATTTACAGCTTGAAGGGGCTTTCAAGAGTTTTGATAGTGAATGTGAAGTGCCGAGCAATATTCGTCACTGA

Protein Analysis

697

Amino Acids

76.37

Weight (kDa)

8.21

Isoelectric Point (pI)

34.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1826
AccB7I CCANNNNNTGG 1 cut(s) 82
AclWI GGATC 3 cut(s) 682, 1139, 1784
AcsI RAATTY 8 cut(s) 67, 316, 937, 966, 1084, 1558, 1579, 1729
AfaI GTAC 4 cut(s) 1311, 1352, 1500, 1717
AfiI CCNNNNNNNGG 3 cut(s) 82, 977, 1127
AflII CTTAAG 1 cut(s) 457
AjnI CCWGG 3 cut(s) 1126, 1149, 1771
AjuI GAANNNNNNNTTGG 4 cut(s) 951, 983, 1530, 1562
AluBI AGCT 6 cut(s) 139, 259, 268, 479, 1097, 2029
AluI AGCT 6 cut(s) 139, 259, 268, 479, 1097, 2029
Alw21I GWGCWC 1 cut(s) 918
Alw26I GTCTC 7 cut(s) 619, 852, 909, 1018, 1502, 1850, 1867
AlwI GGATC 3 cut(s) 682, 1139, 1784
AlwNI CAGNNNCTG 2 cut(s) 1598, 1859
AoxI GGCC 2 cut(s) 1155, 1800
ApeKI GCWGC 6 cut(s) 462, 560, 759, 1037, 1598, 1822
ApoI RAATTY 8 cut(s) 67, 316, 937, 966, 1084, 1558, 1579, 1729
ArsI GACNNNNNNTTYG 2 cut(s) 103, 135
AseI ATTAAT 1 cut(s) 80
Asp700I GAANNNNTTC 3 cut(s) 1431, 1462, 1891
AspA2I CCTAGG 2 cut(s) 646, 853
AspLEI GCGC 3 cut(s) 1027, 1672, 1827
AspS9I GGNCC 2 cut(s) 818, 980
AsuC2I CCSGG 1 cut(s) 1796
AsuHPI GGTGA 4 cut(s) 253, 1244, 1661, 1691
AvaII GGWCC 2 cut(s) 818, 980
AvrII CCTAGG 2 cut(s) 646, 853
BarI GAAGNNNNNNTAC 2 cut(s) 1334, 1366
BbsI GAAGAC 1 cut(s) 532
Bbv12I GWGCWC 1 cut(s) 918
BbvI GCAGC 6 cut(s) 474, 572, 771, 1049, 1585, 1809
BccI CCATC 5 cut(s) 619, 930, 1111, 1640, 1985
BceAI ACGGC 1 cut(s) 692
BciT130I CCWGG 3 cut(s) 1128, 1151, 1773
BcnI CCSGG 1 cut(s) 1796
BcoDI GTCTC 7 cut(s) 619, 852, 909, 1018, 1502, 1850, 1867
BfaI CTAG 8 cut(s) 129, 185, 269, 404, 647, 828, 854, 1098
BfrI CTTAAG 1 cut(s) 457
BisI GCNGC 6 cut(s) 463, 561, 760, 1038, 1599, 1823
BlnI CCTAGG 2 cut(s) 646, 853
BlpI GCTNAGC 1 cut(s) 1238
BlsI GCNGC 6 cut(s) 464, 562, 761, 1039, 1600, 1824
Bme1390I CCNGG 4 cut(s) 1128, 1151, 1773, 1796
Bme18I GGWCC 2 cut(s) 818, 980
BmgT120I GGNCC 2 cut(s) 818, 980
BmiI GGNNCC 1 cut(s) 223
BmrFI CCNGG 4 cut(s) 1128, 1151, 1773, 1796
BmsI GCATC 4 cut(s) 547, 1424, 1585, 1609
BpiI GAAGAC 1 cut(s) 532
BplI GAGNNNNNCTC 2 cut(s) 1847, 1879
Bpu10I CCTNAGC 1 cut(s) 475
Bpu1102I GCTNAGC 1 cut(s) 1238
BpuEI CTTGAG 2 cut(s) 911, 1358
BpuMI CCSGG 1 cut(s) 1796
BsaJI CCNNGG 8 cut(s) 541, 646, 795, 853, 958, 1127, 1305, 1772
BsaXI ACNNNNNCTCC 2 cut(s) 849, 879
Bsc4I CCNNNNNNNGG 3 cut(s) 82, 977, 1127
Bse1I ACTGG 1 cut(s) 505
BseBI CCWGG 3 cut(s) 1128, 1151, 1773
BseDI CCNNGG 8 cut(s) 541, 646, 795, 853, 958, 1127, 1305, 1772
BseGI GGATG 2 cut(s) 562, 1103
BseLI CCNNNNNNNGG 3 cut(s) 82, 977, 1127
BseMII CTCAG 7 cut(s) 156, 229, 531, 696, 1229, 1901, 1980
BseNI ACTGG 1 cut(s) 505
BseRI GAGGAG 1 cut(s) 1488
BseXI GCAGC 6 cut(s) 474, 572, 771, 1049, 1585, 1809
BseYI CCCAGC 1 cut(s) 154
BsgI GTGCAG 1 cut(s) 1056
BshFI GGCC 2 cut(s) 1157, 1802
BsiHKAI GWGCWC 1 cut(s) 918
BsiSI CCGG 1 cut(s) 1796
BslFI GGGAC 1 cut(s) 1648
BslI CCNNNNNNNGG 3 cut(s) 82, 977, 1127
BsmAI GTCTC 7 cut(s) 619, 852, 909, 1018, 1502, 1850, 1867
BsmFI GGGAC 1 cut(s) 1648
BsnI GGCC 2 cut(s) 1157, 1802
Bsp1286I GDGCHC 1 cut(s) 918
Bsp143I GATC 3 cut(s) 674, 1131, 1776
Bsp1720I GCTNAGC 1 cut(s) 1238
BspANI GGCC 2 cut(s) 1157, 1802
BspCNI CTCAG 7 cut(s) 155, 228, 530, 695, 1230, 1902, 1979
BspHI TCATGA 1 cut(s) 1438
BspLI GGNNCC 1 cut(s) 223
BspPI GGATC 3 cut(s) 682, 1139, 1784
BspTI CTTAAG 1 cut(s) 457
BsrI ACTGG 1 cut(s) 505
BssECI CCNNGG 8 cut(s) 541, 646, 795, 853, 958, 1127, 1305, 1772
BssMI GATC 3 cut(s) 674, 1131, 1776
BssT1I CCWWGG 6 cut(s) 541, 646, 795, 853, 958, 1305
Bst2UI CCWGG 3 cut(s) 1128, 1151, 1773
Bst4CI ACNGT 2 cut(s) 585, 1861
Bst6I CTCTTC 3 cut(s) 366, 1001, 1882
BstAFI CTTAAG 1 cut(s) 457
BstC8I GCNNGC 1 cut(s) 126
BstENI CCTNNNNNAGG 1 cut(s) 1125
BstF5I GGATG 2 cut(s) 562, 1103
BstHHI GCGC 3 cut(s) 1027, 1672, 1827
BstKTI GATC 3 cut(s) 677, 1134, 1779
BstMAI GTCTC 7 cut(s) 619, 852, 909, 1018, 1502, 1850, 1867
BstMBI GATC 3 cut(s) 674, 1131, 1776
BstMWI GCNNNNNNNGC 3 cut(s) 265, 459, 756
BstNI CCWGG 3 cut(s) 1128, 1151, 1773
BstNSI RCATGY 1 cut(s) 1324
BstSCI CCNGG 4 cut(s) 1126, 1149, 1771, 1794
BstV1I GCAGC 6 cut(s) 474, 572, 771, 1049, 1585, 1809
BstV2I GAAGAC 1 cut(s) 532
BstXI CCANNNNNNTGG 1 cut(s) 61
BsuRI GGCC 2 cut(s) 1157, 1802
BtgZI GCGATG 1 cut(s) 1931
BtsCI GGATG 2 cut(s) 562, 1103
BtsIMutI CAGTG 4 cut(s) 46, 223, 525, 2086
Cac8I GCNNGC 1 cut(s) 126
CaiI CAGNNNCTG 2 cut(s) 1598, 1859
CciI TCATGA 1 cut(s) 1438
CfoI GCGC 3 cut(s) 1027, 1672, 1827
Cfr13I GGNCC 2 cut(s) 818, 980
Csp6I GTAC 4 cut(s) 1310, 1351, 1499, 1716
CspCI CAANNNNNGTGG 4 cut(s) 22, 57, 501, 536
CviAII CATG 8 cut(s) 424, 1049, 1059, 1321, 1439, 1694, 1704, 1819
CviQI GTAC 4 cut(s) 1310, 1351, 1499, 1716
DpnI GATC 3 cut(s) 676, 1133, 1778
DpnII GATC 3 cut(s) 674, 1131, 1776
DraI TTTAAA 1 cut(s) 1563
Eam1104I CTCTTC 3 cut(s) 366, 1001, 1882
EarI CTCTTC 3 cut(s) 366, 1001, 1882
Eco130I CCWWGG 6 cut(s) 541, 646, 795, 853, 958, 1305
Eco32I GATATC 2 cut(s) 448, 572
Eco47I GGWCC 2 cut(s) 818, 980
EcoNI CCTNNNNNAGG 1 cut(s) 1125
EcoO109I RGGNCCY 2 cut(s) 818, 980
EcoRII CCWGG 3 cut(s) 1126, 1149, 1771
EcoRV GATATC 2 cut(s) 448, 572
EcoT14I CCWWGG 6 cut(s) 541, 646, 795, 853, 958, 1305
ErhI CCWWGG 6 cut(s) 541, 646, 795, 853, 958, 1305
FaeI CATG 8 cut(s) 427, 1052, 1062, 1324, 1442, 1697, 1707, 1822
FaqI GGGAC 1 cut(s) 1648
FatI CATG 8 cut(s) 423, 1048, 1058, 1320, 1438, 1693, 1703, 1818
Fnu4HI GCNGC 6 cut(s) 463, 561, 760, 1038, 1599, 1823
FokI GGATG 2 cut(s) 569, 1090
Fsp4HI GCNGC 6 cut(s) 463, 561, 760, 1038, 1599, 1823
FspBI CTAG 8 cut(s) 129, 185, 269, 404, 647, 828, 854, 1098
FspI TGCGCA 1 cut(s) 1826
GlaI GCGC 3 cut(s) 1026, 1671, 1826
GluI GCNGC 6 cut(s) 463, 561, 760, 1038, 1599, 1823
GsaI CCCAGC 1 cut(s) 158
HaeIII GGCC 2 cut(s) 1157, 1802
HapII CCGG 1 cut(s) 1796
HhaI GCGC 3 cut(s) 1027, 1672, 1827
Hin1II CATG 8 cut(s) 427, 1052, 1062, 1324, 1442, 1697, 1707, 1822
Hin6I GCGC 3 cut(s) 1025, 1670, 1825
HinP1I GCGC 3 cut(s) 1025, 1670, 1825
HincII GTYRAC 1 cut(s) 1289
HindII GTYRAC 1 cut(s) 1289
HpaII CCGG 1 cut(s) 1796
HphI GGTGA 4 cut(s) 253, 1244, 1661, 1691
Hpy166II GTNNAC 2 cut(s) 1289, 1718
Hpy188I TCNGA 5 cut(s) 685, 936, 1003, 1911, 1990
Hpy8I GTNNAC 2 cut(s) 1289, 1718
HpyAV CCTTC 5 cut(s) 1193, 1442, 1448, 1515, 2027
HpyCH4III ACNGT 2 cut(s) 585, 1861
HpyF10VI GCNNNNNNNGC 3 cut(s) 265, 459, 756
Hsp92II CATG 8 cut(s) 427, 1052, 1062, 1324, 1442, 1697, 1707, 1822
HspAI GCGC 3 cut(s) 1025, 1670, 1825
Kzo9I GATC 3 cut(s) 674, 1131, 1776
LmnI GCTCC 1 cut(s) 221
Lsp1109I GCAGC 6 cut(s) 474, 572, 771, 1049, 1585, 1809
LweI GCATC 4 cut(s) 547, 1424, 1585, 1609
MaeI CTAG 8 cut(s) 129, 185, 269, 404, 647, 828, 854, 1098
MaeIII GTNAC 3 cut(s) 709, 1250, 2084
MalI GATC 3 cut(s) 676, 1133, 1778
MboI GATC 3 cut(s) 674, 1131, 1776
MboII GAAGA 6 cut(s) 353, 537, 698, 988, 1655, 1899
MfeI CAATTG 1 cut(s) 1602
MhlI GDGCHC 1 cut(s) 918
MlyI GAGTC 4 cut(s) 948, 1038, 1342, 1683
MmeI TCCRAC 3 cut(s) 536, 995, 1131
MroXI GAANNNNTTC 3 cut(s) 1431, 1462, 1891
MseI TTAA 9 cut(s) 80, 350, 410, 458, 497, 506, 774, 1263, 1562
MspCI CTTAAG 1 cut(s) 457
MspI CCGG 1 cut(s) 1796
MspR9I CCNGG 4 cut(s) 1128, 1151, 1773, 1796
MunI CAATTG 1 cut(s) 1602
MvaI CCWGG 3 cut(s) 1128, 1151, 1773
MwoI GCNNNNNNNGC 3 cut(s) 265, 459, 756
NciI CCSGG 1 cut(s) 1796
NdeII GATC 3 cut(s) 674, 1131, 1776
NlaIII CATG 8 cut(s) 427, 1052, 1062, 1324, 1442, 1697, 1707, 1822
NlaIV GGNNCC 1 cut(s) 223
NmuCI GTSAC 3 cut(s) 709, 1250, 2084
NsbI TGCGCA 1 cut(s) 1826
NspI RCATGY 1 cut(s) 1324
PagI TCATGA 1 cut(s) 1438
PdmI GAANNNNTTC 3 cut(s) 1431, 1462, 1891
PfeI GAWTC 6 cut(s) 379, 436, 535, 895, 1004, 1458
PflFI GACNNNGTC 1 cut(s) 334
PflMI CCANNNNNTGG 1 cut(s) 82
PkrI GCNGC 6 cut(s) 464, 562, 761, 1039, 1600, 1824
PleI GAGTC 4 cut(s) 948, 1038, 1341, 1683
PpsI GAGTC 4 cut(s) 948, 1038, 1341, 1683
PpuMI RGGWCCY 2 cut(s) 818, 980
PshBI ATTAAT 1 cut(s) 80
Psp5II RGGWCCY 2 cut(s) 818, 980
Psp6I CCWGG 3 cut(s) 1126, 1149, 1771
PspFI CCCAGC 1 cut(s) 154
PspGI CCWGG 3 cut(s) 1126, 1149, 1771
PspN4I GGNNCC 1 cut(s) 223
PspPI GGNCC 2 cut(s) 818, 980
PspPPI RGGWCCY 2 cut(s) 818, 980
PstNI CAGNNNCTG 2 cut(s) 1598, 1859
PsyI GACNNNGTC 1 cut(s) 334
RsaI GTAC 4 cut(s) 1311, 1352, 1500, 1717
RsaNI GTAC 4 cut(s) 1310, 1351, 1499, 1716
SaqAI TTAA 9 cut(s) 80, 350, 410, 458, 497, 506, 774, 1263, 1562
SatI GCNGC 6 cut(s) 463, 561, 760, 1038, 1599, 1823
Sau3AI GATC 3 cut(s) 674, 1131, 1776
Sau96I GGNCC 2 cut(s) 818, 980
SchI GAGTC 4 cut(s) 948, 1038, 1342, 1683
ScrFI CCNGG 4 cut(s) 1128, 1151, 1773, 1796
SduI GDGCHC 1 cut(s) 918
SfaNI GCATC 4 cut(s) 547, 1424, 1585, 1609
SinI GGWCC 2 cut(s) 818, 980
SmlI CTYRAG 3 cut(s) 457, 926, 1337
SmoI CTYRAG 3 cut(s) 457, 926, 1337
SspI AATATT 2 cut(s) 1246, 2080
SspMI CTAG 8 cut(s) 129, 185, 269, 404, 647, 828, 854, 1098
StyD4I CCNGG 4 cut(s) 1126, 1149, 1771, 1794
StyI CCWWGG 6 cut(s) 541, 646, 795, 853, 958, 1305
TaaI ACNGT 2 cut(s) 585, 1861
TaqI TCGA 4 cut(s) 1016, 1491, 1661, 1873
TatI WGTACW 3 cut(s) 1350, 1498, 1715
TfiI GAWTC 6 cut(s) 379, 436, 535, 895, 1004, 1458
Tru1I TTAA 9 cut(s) 80, 350, 410, 458, 497, 506, 774, 1263, 1562
Tru9I TTAA 9 cut(s) 80, 350, 410, 458, 497, 506, 774, 1263, 1562
TscAI CASTG 3 cut(s) 46, 223, 525
TseFI GTSAC 3 cut(s) 709, 1250, 2084
TseI GCWGC 6 cut(s) 462, 560, 759, 1037, 1598, 1822
Tsp45I GTSAC 3 cut(s) 709, 1250, 2084
TspDTI ATGAA 8 cut(s) 221, 225, 1424, 1551, 1571, 1807, 1934, 1947
TspGWI ACGGA 2 cut(s) 687, 1585
TspRI CASTG 3 cut(s) 46, 223, 525
Tth111I GACNNNGTC 1 cut(s) 334
Van91I CCANNNNNTGG 1 cut(s) 82
Vha464I CTTAAG 1 cut(s) 457
VpaK11BI GGWCC 2 cut(s) 818, 980
VspI ATTAAT 1 cut(s) 80
XagI CCTNNNNNAGG 1 cut(s) 1125
XapI RAATTY 8 cut(s) 67, 316, 937, 966, 1084, 1558, 1579, 1729
XbaI TCTAGA 1 cut(s) 403
XceI RCATGY 1 cut(s) 1324
XcmI CCANNNNNNNNNTGG 2 cut(s) 271, 618
XmaJI CCTAGG 2 cut(s) 646, 853
XmnI GAANNNNTTC 3 cut(s) 1431, 1462, 1891
XspI CTAG 8 cut(s) 129, 185, 269, 404, 647, 828, 854, 1098
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.