Cyclic nucleotide-gated ion channel 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.4G130500_v2.0.a1 Prupe.4G130500_v2.0.a1 Prupe.4G130500_v2.0.a1 Prupe.4G130500_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2948 |
| AatII | GACGTC | 1 cut(s) | 2589 |
| Acc36I | ACCTGC | 1 cut(s) | 1634 |
| AccI | GTMKAC | 1 cut(s) | 1259 |
| AclWI | GGATC | 5 cut(s) | 143, 1428, 1469, 1525, 1609 |
| AcoI | YGGCCR | 1 cut(s) | 1524 |
| AcsI | RAATTY | 3 cut(s) | 56, 352, 1081 |
| AcuI | CTGAAG | 1 cut(s) | 2562 |
| AcyI | GRCGYC | 2 cut(s) | 1367, 2586 |
| AfaI | GTAC | 6 cut(s) | 638, 784, 1311, 1379, 1447, 2683 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 202, 2858 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 397 |
| AjiI | CACGTC | 1 cut(s) | 1578 |
| AjnI | CCWGG | 1 cut(s) | 1136 |
| Alw21I | GWGCWC | 3 cut(s) | 719, 2307, 2959 |
| Alw26I | GTCTC | 1 cut(s) | 2396 |
| Alw44I | GTGCAC | 1 cut(s) | 2955 |
| AlwI | GGATC | 5 cut(s) | 143, 1428, 1469, 1525, 1609 |
| Ama87I | CYCGRG | 1 cut(s) | 360 |
| AoxI | GGCC | 6 cut(s) | 904, 1121, 1524, 1770, 2013, 2789 |
| ApaLI | GTGCAC | 1 cut(s) | 2955 |
| ApeKI | GCWGC | 4 cut(s) | 1461, 2197, 2396, 2744 |
| ApoI | RAATTY | 3 cut(s) | 56, 352, 1081 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1082, 1085, 1238, 1569 |
| AspS9I | GGNCC | 5 cut(s) | 904, 1121, 1411, 2137, 2537 |
| AsuHPI | GGTGA | 5 cut(s) | 397, 2060, 2105, 2355, 2557 |
| AsuII | TTCGAA | 1 cut(s) | 1402 |
| AsuNHI | GCTAGC | 2 cut(s) | 611, 2608 |
| AvaI | CYCGRG | 1 cut(s) | 360 |
| AvaII | GGWCC | 3 cut(s) | 1411, 2137, 2537 |
| BaeGI | GKGCMC | 1 cut(s) | 2959 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 774, 807 |
| BalI | TGGCCA | 1 cut(s) | 1526 |
| BanII | GRGCYC | 1 cut(s) | 2307 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 290, 322 |
| BauI | CACGAG | 1 cut(s) | 856 |
| BbsI | GAAGAC | 1 cut(s) | 2550 |
| Bbv12I | GWGCWC | 3 cut(s) | 719, 2307, 2959 |
| BbvI | GCAGC | 4 cut(s) | 1473, 2209, 2408, 2731 |
| BccI | CCATC | 7 cut(s) | 173, 995, 1135, 2024, 2368, 2833, 2890 |
| BceAI | ACGGC | 5 cut(s) | 566, 2396, 2421, 2487, 2517 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 919, 953, 1572, 1606 |
| BciT130I | CCWGG | 1 cut(s) | 1138 |
| BciVI | GTATCC | 1 cut(s) | 455 |
| BclI | TGATCA | 1 cut(s) | 733 |
| BcoDI | GTCTC | 1 cut(s) | 2396 |
| BfaI | CTAG | 8 cut(s) | 146, 612, 1229, 1479, 1943, 2273, 2609, 2648 |
| BfmI | CTRYAG | 1 cut(s) | 1128 |
| BfuAI | ACCTGC | 1 cut(s) | 1634 |
| BfuI | GTATCC | 1 cut(s) | 455 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1142, 2405 |
| BglII | AGATCT | 2 cut(s) | 19, 660 |
| BisI | GCNGC | 6 cut(s) | 809, 1462, 2198, 2397, 2745, 2811 |
| BlsI | GCNGC | 6 cut(s) | 810, 1463, 2199, 2398, 2746, 2812 |
| Bme1390I | CCNGG | 1 cut(s) | 1138 |
| Bme18I | GGWCC | 3 cut(s) | 1411, 2137, 2537 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 397 |
| BmeT110I | CYCGRG | 1 cut(s) | 360 |
| BmgBI | CACGTC | 1 cut(s) | 1578 |
| BmgT120I | GGNCC | 5 cut(s) | 904, 1121, 1411, 2137, 2537 |
| BmiI | GGNNCC | 5 cut(s) | 628, 905, 1412, 1413, 2538 |
| BmrFI | CCNGG | 1 cut(s) | 1138 |
| BmrI | ACTGGG | 1 cut(s) | 2162 |
| BmsI | GCATC | 6 cut(s) | 698, 1210, 1592, 1598, 2753, 2857 |
| BmtI | GCTAGC | 2 cut(s) | 615, 2612 |
| BmuI | ACTGGG | 1 cut(s) | 2162 |
| BpiI | GAAGAC | 1 cut(s) | 2550 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2305, 2337 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2416 |
| Bpu14I | TTCGAA | 1 cut(s) | 1402 |
| BpuEI | CTTGAG | 2 cut(s) | 44, 863 |
| Bsa29I | ATCGAT | 1 cut(s) | 177 |
| BsaBI | GATNNNNATC | 3 cut(s) | 119, 1037, 1224 |
| BsaHI | GRCGYC | 2 cut(s) | 1367, 2586 |
| BsaJI | CCNNGG | 3 cut(s) | 196, 1253, 1680 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 356, 386 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 202, 2858 |
| Bse118I | RCCGGY | 2 cut(s) | 1716, 1863 |
| Bse1I | ACTGG | 7 cut(s) | 505, 568, 997, 1370, 2168, 2443, 2952 |
| Bse8I | GATNNNNATC | 3 cut(s) | 119, 1037, 1224 |
| BseBI | CCWGG | 1 cut(s) | 1138 |
| BseCI | ATCGAT | 1 cut(s) | 177 |
| BseDI | CCNNGG | 3 cut(s) | 196, 1253, 1680 |
| BseGI | GGATG | 6 cut(s) | 579, 691, 713, 1146, 1336, 2848 |
| BseJI | GATNNNNATC | 3 cut(s) | 119, 1037, 1224 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 202, 2858 |
| BseMII | CTCAG | 3 cut(s) | 514, 931, 1689 |
| BseNI | ACTGG | 7 cut(s) | 505, 568, 997, 1370, 2168, 2443, 2952 |
| BseRI | GAGGAG | 4 cut(s) | 1885, 2326, 2874, 2877 |
| BseSI | GKGCMC | 1 cut(s) | 2959 |
| BseXI | GCAGC | 4 cut(s) | 1473, 2209, 2408, 2731 |
| BseYI | CCCAGC | 2 cut(s) | 1595, 2193 |
| BsgI | GTGCAG | 1 cut(s) | 1480 |
| BshFI | GGCC | 6 cut(s) | 906, 1123, 1526, 1772, 2015, 2791 |
| BshVI | ATCGAT | 1 cut(s) | 177 |
| BsiHKAI | GWGCWC | 3 cut(s) | 719, 2307, 2959 |
| BsiHKCI | CYCGRG | 1 cut(s) | 360 |
| BsiSI | CCGG | 3 cut(s) | 1717, 1864, 2514 |
| BslFI | GGGAC | 4 cut(s) | 1424, 1849, 1916, 2733 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 202, 2858 |
| BsmAI | GTCTC | 1 cut(s) | 2396 |
| BsmBI | CGTCTC | 1 cut(s) | 2396 |
| BsmFI | GGGAC | 4 cut(s) | 1424, 1849, 1916, 2733 |
| BsmI | GAATGC | 2 cut(s) | 1155, 2420 |
| BsnI | GGCC | 6 cut(s) | 906, 1123, 1526, 1772, 2015, 2791 |
| BsoBI | CYCGRG | 1 cut(s) | 360 |
| Bsp119I | TTCGAA | 1 cut(s) | 1402 |
| Bsp1286I | GDGCHC | 3 cut(s) | 719, 2307, 2959 |
| Bsp19I | CCATGG | 1 cut(s) | 1680 |
| BspANI | GGCC | 6 cut(s) | 906, 1123, 1526, 1772, 2015, 2791 |
| BspCNI | CTCAG | 3 cut(s) | 513, 930, 1688 |
| BspDI | ATCGAT | 1 cut(s) | 177 |
| BspHI | TCATGA | 3 cut(s) | 700, 2307, 2338 |
| BspLI | GGNNCC | 5 cut(s) | 628, 905, 1412, 1413, 2538 |
| BspMI | ACCTGC | 1 cut(s) | 1634 |
| BspOI | GCTAGC | 2 cut(s) | 615, 2612 |
| BspPI | GGATC | 5 cut(s) | 143, 1428, 1469, 1525, 1609 |
| BspQI | GCTCTTC | 1 cut(s) | 1560 |
| BspT104I | TTCGAA | 1 cut(s) | 1402 |
| BsrFI | RCCGGY | 2 cut(s) | 1716, 1863 |
| BsrI | ACTGG | 7 cut(s) | 505, 568, 997, 1370, 2168, 2443, 2952 |
| BssAI | RCCGGY | 2 cut(s) | 1716, 1863 |
| BssECI | CCNNGG | 3 cut(s) | 196, 1253, 1680 |
| BssNAI | GTATAC | 1 cut(s) | 1260 |
| BssNI | GRCGYC | 2 cut(s) | 1367, 2586 |
| BssSI | CACGAG | 1 cut(s) | 856 |
| BssT1I | CCWWGG | 3 cut(s) | 196, 1253, 1680 |
| Bst1107I | GTATAC | 1 cut(s) | 1260 |
| Bst2BI | CACGAG | 1 cut(s) | 856 |
| Bst2UI | CCWGG | 1 cut(s) | 1138 |
| Bst4CI | ACNGT | 6 cut(s) | 754, 893, 1005, 2459, 2511, 2961 |
| Bst6I | CTCTTC | 1 cut(s) | 1560 |
| BstACI | GRCGYC | 2 cut(s) | 1367, 2586 |
| BstBI | TTCGAA | 1 cut(s) | 1402 |
| BstC8I | GCNNGC | 9 cut(s) | 33, 613, 682, 998, 1125, 1427, 2112, 2444, 2610 |
| BstDSI | CCRYGG | 1 cut(s) | 1680 |
| BstF5I | GGATG | 6 cut(s) | 579, 691, 713, 1146, 1336, 2848 |
| BstMAI | GTCTC | 1 cut(s) | 2396 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 927, 1133, 1142, 1676, 2405, 2614, 2753, 2927 |
| BstNI | CCWGG | 1 cut(s) | 1138 |
| BstNSI | RCATGY | 2 cut(s) | 1429, 2446 |
| BstSCI | CCNGG | 1 cut(s) | 1136 |
| BstSFI | CTRYAG | 1 cut(s) | 1128 |
| BstSLI | GKGCMC | 1 cut(s) | 2959 |
| BstV1I | GCAGC | 4 cut(s) | 1473, 2209, 2408, 2731 |
| BstV2I | GAAGAC | 1 cut(s) | 2550 |
| BstX2I | RGATCY | 3 cut(s) | 19, 148, 660 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 623, 2438, 2597 |
| BstYI | RGATCY | 3 cut(s) | 19, 148, 660 |
| BstZ17I | GTATAC | 1 cut(s) | 1260 |
| Bsu15I | ATCGAT | 1 cut(s) | 177 |
| BsuI | GTATCC | 1 cut(s) | 455 |
| BsuRI | GGCC | 6 cut(s) | 906, 1123, 1526, 1772, 2015, 2791 |
| BsuTUI | ATCGAT | 1 cut(s) | 177 |
| BtgI | CCRYGG | 1 cut(s) | 1680 |
| BtgZI | GCGATG | 1 cut(s) | 1575 |
| BtrI | CACGTC | 1 cut(s) | 1578 |
| BtsCI | GGATG | 6 cut(s) | 579, 691, 713, 1146, 1336, 2848 |
| BtsIMutI | CAGTG | 6 cut(s) | 990, 1377, 2436, 2455, 2957, 2959 |
| BveI | ACCTGC | 1 cut(s) | 1634 |
| Cac8I | GCNNGC | 9 cut(s) | 33, 613, 682, 998, 1125, 1427, 2112, 2444, 2610 |
| CciI | TCATGA | 3 cut(s) | 700, 2307, 2338 |
| Cfr10I | RCCGGY | 2 cut(s) | 1716, 1863 |
| Cfr13I | GGNCC | 5 cut(s) | 904, 1121, 1411, 2137, 2537 |
| ClaI | ATCGAT | 1 cut(s) | 177 |
| CseI | GACGC | 1 cut(s) | 1375 |
| Csp6I | GTAC | 6 cut(s) | 637, 783, 1310, 1378, 1446, 2682 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2355, 2390, 2890, 2925 |
| CviQI | GTAC | 6 cut(s) | 637, 783, 1310, 1378, 1446, 2682 |
| DraI | TTTAAA | 3 cut(s) | 768, 1741, 1891 |
| DriI | GACNNNNNGTC | 1 cut(s) | 397 |
| EaeI | YGGCCR | 1 cut(s) | 1524 |
| Eam1104I | CTCTTC | 1 cut(s) | 1560 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 397 |
| EarI | CTCTTC | 1 cut(s) | 1560 |
| Ecl136II | GAGCTC | 1 cut(s) | 2305 |
| Eco130I | CCWWGG | 3 cut(s) | 196, 1253, 1680 |
| Eco147I | AGGCCT | 1 cut(s) | 2791 |
| Eco24I | GRGCYC | 1 cut(s) | 2307 |
| Eco32I | GATATC | 3 cut(s) | 253, 316, 2875 |
| Eco47I | GGWCC | 3 cut(s) | 1411, 2137, 2537 |
| Eco53kI | GAGCTC | 1 cut(s) | 2305 |
| Eco57I | CTGAAG | 1 cut(s) | 2562 |
| Eco88I | CYCGRG | 1 cut(s) | 360 |
| EcoICRI | GAGCTC | 1 cut(s) | 2305 |
| EcoO109I | RGGNCCY | 3 cut(s) | 904, 1411, 2537 |
| EcoRII | CCWGG | 1 cut(s) | 1136 |
| EcoRV | GATATC | 3 cut(s) | 253, 316, 2875 |
| EcoT14I | CCWWGG | 3 cut(s) | 196, 1253, 1680 |
| EcoT22I | ATGCAT | 1 cut(s) | 713 |
| EcoT38I | GRGCYC | 1 cut(s) | 2307 |
| ErhI | CCWWGG | 3 cut(s) | 196, 1253, 1680 |
| Esp3I | CGTCTC | 1 cut(s) | 2396 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1070, 1102 |
| FaqI | GGGAC | 4 cut(s) | 1424, 1849, 1916, 2733 |
| FbaI | TGATCA | 1 cut(s) | 733 |
| FblI | GTMKAC | 1 cut(s) | 1259 |
| Fnu4HI | GCNGC | 6 cut(s) | 809, 1462, 2198, 2397, 2745, 2811 |
| FokI | GGATG | 6 cut(s) | 586, 678, 720, 1153, 1343, 2835 |
| FriOI | GRGCYC | 1 cut(s) | 2307 |
| Fsp4HI | GCNGC | 6 cut(s) | 809, 1462, 2198, 2397, 2745, 2811 |
| FspBI | CTAG | 8 cut(s) | 146, 612, 1229, 1479, 1943, 2273, 2609, 2648 |
| GluI | GCNGC | 6 cut(s) | 809, 1462, 2198, 2397, 2745, 2811 |
| GsaI | CCCAGC | 2 cut(s) | 1599, 2197 |
| HaeIII | GGCC | 6 cut(s) | 906, 1123, 1526, 1772, 2015, 2791 |
| HapII | CCGG | 3 cut(s) | 1717, 1864, 2514 |
| HgaI | GACGC | 1 cut(s) | 1375 |
| Hin1I | GRCGYC | 2 cut(s) | 1367, 2586 |
| HincII | GTYRAC | 1 cut(s) | 2622 |
| HindII | GTYRAC | 1 cut(s) | 2622 |
| HinfI | GANTC | 7 cut(s) | 773, 836, 1234, 1511, 1986, 2256, 2552 |
| HpaI | GTTAAC | 1 cut(s) | 2622 |
| HpaII | CCGG | 3 cut(s) | 1717, 1864, 2514 |
| HphI | GGTGA | 5 cut(s) | 397, 2060, 2105, 2355, 2557 |
| Hpy166II | GTNNAC | 6 cut(s) | 1260, 1828, 2071, 2102, 2622, 2957 |
| Hpy188I | TCNGA | 7 cut(s) | 19, 1032, 1063, 1365, 1575, 1927, 2738 |
| Hpy8I | GTNNAC | 6 cut(s) | 1260, 1828, 2071, 2102, 2622, 2957 |
| Hpy99I | CGWCG | 2 cut(s) | 42, 2588 |
| HpyCH4III | ACNGT | 6 cut(s) | 754, 893, 1005, 2459, 2511, 2961 |
| HpyCH4IV | ACGT | 6 cut(s) | 40, 1376, 1549, 1577, 2586, 2684 |
| HpyCH4V | TGCA | 9 cut(s) | 137, 684, 711, 974, 1461, 1710, 2428, 2446, 2957 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 927, 1133, 1142, 1676, 2405, 2614, 2753, 2927 |
| HpySE526I | ACGT | 6 cut(s) | 40, 1376, 1549, 1577, 2586, 2684 |
| Hsp92I | GRCGYC | 2 cut(s) | 1367, 2586 |
| KflI | GGGWCCC | 1 cut(s) | 1411 |
| Ksp22I | TGATCA | 1 cut(s) | 733 |
| KspAI | GTTAAC | 1 cut(s) | 2622 |
| LguI | GCTCTTC | 1 cut(s) | 1560 |
| LmnI | GCTCC | 3 cut(s) | 626, 2522, 2614 |
| Lsp1109I | GCAGC | 4 cut(s) | 1473, 2209, 2408, 2731 |
| LweI | GCATC | 6 cut(s) | 698, 1210, 1592, 1598, 2753, 2857 |
| MaeI | CTAG | 8 cut(s) | 146, 612, 1229, 1479, 1943, 2273, 2609, 2648 |
| MaeII | ACGT | 6 cut(s) | 40, 1376, 1549, 1577, 2586, 2684 |
| MaeIII | GTNAC | 7 cut(s) | 49, 244, 385, 851, 1302, 1355, 1372 |
| MflI | RGATCY | 3 cut(s) | 19, 148, 660 |
| MhlI | GDGCHC | 3 cut(s) | 719, 2307, 2959 |
| MlsI | TGGCCA | 1 cut(s) | 1526 |
| MluNI | TGGCCA | 1 cut(s) | 1526 |
| MmeI | TCCRAC | 3 cut(s) | 348, 899, 2667 |
| Mox20I | TGGCCA | 1 cut(s) | 1526 |
| Mph1103I | ATGCAT | 1 cut(s) | 713 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1082, 1085, 1238, 1569 |
| MscI | TGGCCA | 1 cut(s) | 1526 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1653, 2337, 2441, 2460, 2853 |
| Msp20I | TGGCCA | 1 cut(s) | 1526 |
| MspA1I | CMGCKG | 2 cut(s) | 811, 1599 |
| MspI | CCGG | 3 cut(s) | 1717, 1864, 2514 |
| MspR9I | CCNGG | 1 cut(s) | 1138 |
| Mva1269I | GAATGC | 2 cut(s) | 1155, 2420 |
| MvaI | CCWGG | 1 cut(s) | 1138 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 927, 1133, 1142, 1676, 2405, 2614, 2753, 2927 |
| NcoI | CCATGG | 1 cut(s) | 1680 |
| NheI | GCTAGC | 2 cut(s) | 611, 2608 |
| NlaIV | GGNNCC | 5 cut(s) | 628, 905, 1412, 1413, 2538 |
| NmeAIII | GCCGAG | 1 cut(s) | 2425 |
| NmuCI | GTSAC | 5 cut(s) | 49, 385, 1302, 1355, 1372 |
| NsiI | ATGCAT | 1 cut(s) | 713 |
| NspI | RCATGY | 2 cut(s) | 1429, 2446 |
| NspV | TTCGAA | 1 cut(s) | 1402 |
| PaeI | GCATGC | 2 cut(s) | 1429, 2446 |
| PagI | TCATGA | 3 cut(s) | 700, 2307, 2338 |
| PceI | AGGCCT | 1 cut(s) | 2791 |
| PciSI | GCTCTTC | 1 cut(s) | 1560 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1373 |
| PctI | GAATGC | 2 cut(s) | 1155, 2420 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1082, 1085, 1238, 1569 |
| PfeI | GAWTC | 7 cut(s) | 773, 836, 1234, 1511, 1986, 2256, 2552 |
| PkrI | GCNGC | 6 cut(s) | 810, 1463, 2199, 2398, 2746, 2812 |
| PpuMI | RGGWCCY | 2 cut(s) | 1411, 2537 |
| PsiI | TTATAA | 1 cut(s) | 2948 |
| Psp124BI | GAGCTC | 1 cut(s) | 2307 |
| Psp5II | RGGWCCY | 2 cut(s) | 1411, 2537 |
| Psp6I | CCWGG | 1 cut(s) | 1136 |
| PspFI | CCCAGC | 2 cut(s) | 1595, 2193 |
| PspGI | CCWGG | 1 cut(s) | 1136 |
| PspN4I | GGNNCC | 5 cut(s) | 628, 905, 1412, 1413, 2538 |
| PspPI | GGNCC | 5 cut(s) | 904, 1121, 1411, 2137, 2537 |
| PspPPI | RGGWCCY | 2 cut(s) | 1411, 2537 |
| PsuI | RGATCY | 3 cut(s) | 19, 148, 660 |
| RsaI | GTAC | 6 cut(s) | 638, 784, 1311, 1379, 1447, 2683 |
| RsaNI | GTAC | 6 cut(s) | 637, 783, 1310, 1378, 1446, 2682 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1653, 2337, 2441, 2460, 2853 |
| SacI | GAGCTC | 1 cut(s) | 2307 |
| SapI | GCTCTTC | 1 cut(s) | 1560 |
| SatI | GCNGC | 6 cut(s) | 809, 1462, 2198, 2397, 2745, 2811 |
| Sau96I | GGNCC | 5 cut(s) | 904, 1121, 1411, 2137, 2537 |
| ScrFI | CCNGG | 1 cut(s) | 1138 |
| SduI | GDGCHC | 3 cut(s) | 719, 2307, 2959 |
| SfaNI | GCATC | 6 cut(s) | 698, 1210, 1592, 1598, 2753, 2857 |
| SfcI | CTRYAG | 1 cut(s) | 1128 |
| SfuI | TTCGAA | 1 cut(s) | 1402 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1716 |
| SinI | GGWCC | 3 cut(s) | 1411, 2137, 2537 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1653, 2337, 2441, 2460, 2853 |
| SmlI | CTYRAG | 2 cut(s) | 23, 842 |
| SmoI | CTYRAG | 2 cut(s) | 23, 842 |
| SphI | GCATGC | 2 cut(s) | 1429, 2446 |
| SseBI | AGGCCT | 1 cut(s) | 2791 |
| SspI | AATATT | 4 cut(s) | 828, 1297, 2248, 2292 |
| SspMI | CTAG | 8 cut(s) | 146, 612, 1229, 1479, 1943, 2273, 2609, 2648 |
| SstI | GAGCTC | 1 cut(s) | 2307 |
| StuI | AGGCCT | 1 cut(s) | 2791 |
| StyD4I | CCNGG | 1 cut(s) | 1136 |
| StyI | CCWWGG | 3 cut(s) | 196, 1253, 1680 |
| TaaI | ACNGT | 6 cut(s) | 754, 893, 1005, 2459, 2511, 2961 |
| TaiI | ACGT | 6 cut(s) | 43, 1379, 1552, 1580, 2589, 2687 |
| TaqI | TCGA | 5 cut(s) | 177, 526, 816, 1089, 1402 |
| TatI | WGTACW | 1 cut(s) | 1309 |
| TauI | GCSGC | 2 cut(s) | 811, 2813 |
| TfiI | GAWTC | 7 cut(s) | 773, 836, 1234, 1511, 1986, 2256, 2552 |
| TscAI | CASTG | 6 cut(s) | 997, 1377, 2443, 2462, 2959, 2964 |
| TseFI | GTSAC | 5 cut(s) | 49, 385, 1302, 1355, 1372 |
| TseI | GCWGC | 4 cut(s) | 1461, 2197, 2396, 2744 |
| Tsp45I | GTSAC | 5 cut(s) | 49, 385, 1302, 1355, 1372 |
| TspGWI | ACGGA | 6 cut(s) | 263, 326, 487, 586, 2838, 2923 |
| TspRI | CASTG | 6 cut(s) | 997, 1377, 2443, 2462, 2959, 2964 |
| VneI | GTGCAC | 1 cut(s) | 2955 |
| VpaK11BI | GGWCC | 3 cut(s) | 1411, 2137, 2537 |
| XapI | RAATTY | 3 cut(s) | 56, 352, 1081 |
| XbaI | TCTAGA | 1 cut(s) | 1228 |
| XceI | RCATGY | 2 cut(s) | 1429, 2446 |
| XmiI | GTMKAC | 1 cut(s) | 1259 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1082, 1085, 1238, 1569 |
| XspI | CTAG | 8 cut(s) | 146, 612, 1229, 1479, 1943, 2273, 2609, 2648 |
| ZraI | GACGTC | 1 cut(s) | 2587 |
| Zsp2I | ATGCAT | 1 cut(s) | 713 |