Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

7471740 .. 7473003

Gene Structure 1264 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G135300.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 690 bp

ATGGGACGTCATGCTTTAAGCATATTTAGCTTTGCATCTGTCCTGGCTGCCACCTGTAACTTCTCTGAAGATAACAAGCTTGGTGAAGGGGGCTTTGGACCTCATTATAAGGACAAATTGGCGACAGGAAGAGAAATAGCTGTAAAGAGACTTTCCAAATGCTCGAGACAAGAAGCATTGCAGTTCAAAAATGAATTAAGACTTATATATGAACTACAAACATACAAACCTTTAATTCATATGGATTTAAAAGCTAGCAACATACTACTTGACGAAAATATGAACCCCAAAATTTCAGATTTTGGTATGGCAAGAATTTTCACTCATAATGAATTGGAAGAAAATACTAGTTGGATTGTTGGAACACGATCTGTACATGTCTCCAACATCATGGAGGGAACTTTTTCAATAAAATCAGATGTCTACAGCTTTGGAGTGTTAACGCTTGAAATCATAAGTGGCAGGAAAAACAATAGATTATACAAAGAGGATCGTGTGCTCAATTTAGTAGGATATGCATGGGTGTTGTGGAAGGAAGGTGGAGGGCTTGAAATAATGCATACATCCGATAGACCAACTATGTCAGATGTCATATCTATGCTGACAAGTGAAAGCATGGAGTTAGCTATGCCAACAAAGCCAGCATTTTACACAGAAAGAAACGCGGCCACTGCTGCTATAGCTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr

Protein Analysis

230

Amino Acids

25.78

Weight (kDa)

7.02

Isoelectric Point (pI)

42.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	108
AatII	GACGTC	1 cut(s)	10
AccI	GTMKAC	1 cut(s)	423
AccII	CGCG	1 cut(s)	665
AciI	CCGC	1 cut(s)	665
AclWI	GGATC	1 cut(s)	498
AcoI	YGGCCR	1 cut(s)	666
AcsI	RAATTY	2 cut(s)	291, 315
AcuI	CTGAAG	1 cut(s)	87
AcyI	GRCGYC	1 cut(s)	7
AfaI	GTAC	1 cut(s)	375
AflIII	ACRYGT	1 cut(s)	376
AgsI	TTSAA	4 cut(s)	187, 408, 449, 551
AhlI	ACTAGT	1 cut(s)	347
AjnI	CCWGG	1 cut(s)	42
AjuI	GAANNNNNNNTTGG	2 cut(s)	78, 110
AluBI	AGCT	7 cut(s)	30, 79, 140, 254, 429, 626, 683
AluI	AGCT	7 cut(s)	30, 79, 140, 254, 429, 626, 683
Alw21I	GWGCWC	1 cut(s)	501
Alw26I	GTCTC	3 cut(s)	142, 160, 385
AlwI	GGATC	1 cut(s)	498
Ama87I	CYCGRG	1 cut(s)	163
AoxI	GGCC	1 cut(s)	666
ApeKI	GCWGC	2 cut(s)	47, 674
ApoI	RAATTY	2 cut(s)	291, 315
Asp700I	GAANNNNTTC	1 cut(s)	403
AspS9I	GGNCC	1 cut(s)	98
AsuHPI	GGTGA	1 cut(s)	95
AsuNHI	GCTAGC	1 cut(s)	254
AvaI	CYCGRG	1 cut(s)	163
AvaII	GGWCC	1 cut(s)	98
Bbv12I	GWGCWC	1 cut(s)	501
BbvI	GCAGC	2 cut(s)	34, 661
BciT130I	CCWGG	1 cut(s)	44
BcoDI	GTCTC	3 cut(s)	142, 160, 385
BcuI	ACTAGT	1 cut(s)	347
BfaI	CTAG	3 cut(s)	255, 348, 684
BfmI	CTRYAG	2 cut(s)	424, 678
BisI	GCNGC	3 cut(s)	48, 666, 675
BlsI	GCNGC	3 cut(s)	49, 667, 676
Bme1390I	CCNGG	1 cut(s)	44
Bme18I	GGWCC	1 cut(s)	98
BmeT110I	CYCGRG	1 cut(s)	163
BmgT120I	GGNCC	1 cut(s)	98
BmrFI	CCNGG	1 cut(s)	44
BmsI	GCATC	1 cut(s)	44
BmtI	GCTAGC	1 cut(s)	258
BsaHI	GRCGYC	1 cut(s)	7
Bse3DI	GCAATG	1 cut(s)	176
BseBI	CCWGG	1 cut(s)	44
BseGI	GGATG	1 cut(s)	563
BseMI	GCAATG	1 cut(s)	176
BseXI	GCAGC	2 cut(s)	34, 661
Bsh1236I	CGCG	1 cut(s)	665
BshFI	GGCC	1 cut(s)	668
BsiHKAI	GWGCWC	1 cut(s)	501
BsiHKCI	CYCGRG	1 cut(s)	163
BslFI	GGGAC	1 cut(s)	18
BsmAI	GTCTC	3 cut(s)	142, 160, 385
BsmFI	GGGAC	1 cut(s)	18
BsnI	GGCC	1 cut(s)	668
BsoBI	CYCGRG	1 cut(s)	163
Bsp1286I	GDGCHC	1 cut(s)	501
Bsp1407I	TGTACA	1 cut(s)	373
Bsp143I	GATC	2 cut(s)	368, 490
BspACI	CCGC	1 cut(s)	665
BspANI	GGCC	1 cut(s)	668
BspFNI	CGCG	1 cut(s)	665
BspOI	GCTAGC	1 cut(s)	258
BspPI	GGATC	1 cut(s)	498
BsrDI	GCAATG	1 cut(s)	176
BsrGI	TGTACA	1 cut(s)	373
BssMI	GATC	2 cut(s)	368, 490
BssNI	GRCGYC	1 cut(s)	7
Bst2UI	CCWGG	1 cut(s)	44
Bst6I	CTCTTC	1 cut(s)	124
BstACI	GRCGYC	1 cut(s)	7
BstAUI	TGTACA	1 cut(s)	373
BstC8I	GCNNGC	2 cut(s)	256, 642
BstF5I	GGATG	1 cut(s)	563
BstFNI	CGCG	1 cut(s)	665
BstKTI	GATC	2 cut(s)	371, 493
BstMAI	GTCTC	3 cut(s)	142, 160, 385
BstMBI	GATC	2 cut(s)	368, 490
BstMWI	GCNNNNNNNGC	5 cut(s)	27, 637, 671, 674, 680
BstNI	CCWGG	1 cut(s)	44
BstNSI	RCATGY	1 cut(s)	380
BstSCI	CCNGG	1 cut(s)	42
BstSFI	CTRYAG	2 cut(s)	424, 678
BstUI	CGCG	1 cut(s)	665
BstV1I	GCAGC	2 cut(s)	34, 661
BstXI	CCANNNNNNTGG	1 cut(s)	391
BsuRI	GGCC	1 cut(s)	668
BtsCI	GGATG	1 cut(s)	563
BtsI	GCAGTG	1 cut(s)	669
BtsIMutI	CAGTG	1 cut(s)	669
Cac8I	GCNNGC	2 cut(s)	256, 642
Cfr13I	GGNCC	1 cut(s)	98
Csp6I	GTAC	1 cut(s)	374
CviAII	CATG	5 cut(s)	11, 377, 391, 519, 616
CviQI	GTAC	1 cut(s)	374
DpnI	GATC	2 cut(s)	370, 492
DpnII	GATC	2 cut(s)	368, 490
DraI	TTTAAA	1 cut(s)	249
EaeI	YGGCCR	1 cut(s)	666
Eam1104I	CTCTTC	1 cut(s)	124
EarI	CTCTTC	1 cut(s)	124
Eco47I	GGWCC	1 cut(s)	98
Eco57I	CTGAAG	1 cut(s)	87
Eco88I	CYCGRG	1 cut(s)	163
EcoRII	CCWGG	1 cut(s)	42
EcoT22I	ATGCAT	2 cut(s)	520, 561
FaeI	CATG	5 cut(s)	14, 380, 394, 522, 619
FaqI	GGGAC	1 cut(s)	18
FatI	CATG	5 cut(s)	10, 376, 390, 518, 615
FauNDI	CATATG	1 cut(s)	240
FblI	GTMKAC	1 cut(s)	423
Fnu4HI	GCNGC	3 cut(s)	48, 666, 675
FokI	GGATG	1 cut(s)	550
Fsp4HI	GCNGC	3 cut(s)	48, 666, 675
FspBI	CTAG	3 cut(s)	255, 348, 684
GluI	GCNGC	3 cut(s)	48, 666, 675
HaeIII	GGCC	1 cut(s)	668
Hin1I	GRCGYC	1 cut(s)	7
Hin1II	CATG	5 cut(s)	14, 380, 394, 522, 619
HincII	GTYRAC	1 cut(s)	441
HindII	GTYRAC	1 cut(s)	441
HindIII	AAGCTT	1 cut(s)	77
HpaI	GTTAAC	1 cut(s)	441
HphI	GGTGA	1 cut(s)	95
Hpy166II	GTNNAC	2 cut(s)	424, 441
Hpy188I	TCNGA	5 cut(s)	67, 298, 418, 568, 586
Hpy188III	TCNNGA	1 cut(s)	165
Hpy8I	GTNNAC	2 cut(s)	424, 441
HpyAV	CCTTC	3 cut(s)	80, 526, 530
HpyCH4IV	ACGT	1 cut(s)	7
HpyCH4V	TGCA	4 cut(s)	35, 181, 518, 559
HpyF10VI	GCNNNNNNNGC	5 cut(s)	27, 637, 671, 674, 680
HpySE526I	ACGT	1 cut(s)	7
Hsp92I	GRCGYC	1 cut(s)	7
Hsp92II	CATG	5 cut(s)	14, 380, 394, 522, 619
KspAI	GTTAAC	1 cut(s)	441
Kzo9I	GATC	2 cut(s)	368, 490
LpnPI	CCDG	6 cut(s)	29, 56, 67, 111, 448, 654
Lsp1109I	GCAGC	2 cut(s)	34, 661
LweI	GCATC	1 cut(s)	44
MaeI	CTAG	3 cut(s)	255, 348, 684
MaeII	ACGT	1 cut(s)	7
MaeIII	GTNAC	1 cut(s)	56
MalI	GATC	2 cut(s)	370, 492
MboI	GATC	2 cut(s)	368, 490
MboII	GAAGA	3 cut(s)	80, 141, 350
MhlI	GDGCHC	1 cut(s)	501
MluCI	AATT	7 cut(s)	116, 194, 234, 291, 315, 332, 502
MmeI	TCCRAC	3 cut(s)	332, 340, 408
MnlI	CCTC	4 cut(s)	111, 388, 481, 536
Mph1103I	ATGCAT	2 cut(s)	520, 561
MroXI	GAANNNNTTC	1 cut(s)	403
MseI	TTAA	5 cut(s)	17, 197, 233, 248, 440
MslI	CAYNNNNRTG	1 cut(s)	596
MspR9I	CCNGG	1 cut(s)	44
MvaI	CCWGG	1 cut(s)	44
MvnI	CGCG	1 cut(s)	665
MwoI	GCNNNNNNNGC	5 cut(s)	27, 637, 671, 674, 680
NdeI	CATATG	1 cut(s)	240
NdeII	GATC	2 cut(s)	368, 490
NheI	GCTAGC	1 cut(s)	254
NlaIII	CATG	5 cut(s)	14, 380, 394, 522, 619
NsiI	ATGCAT	2 cut(s)	520, 561
NspI	RCATGY	1 cut(s)	380
PaeR7I	CTCGAG	1 cut(s)	163
PciI	ACATGT	1 cut(s)	376
PdmI	GAANNNNTTC	1 cut(s)	403
PkrI	GCNGC	3 cut(s)	49, 667, 676
PscI	ACATGT	1 cut(s)	376
PsiI	TTATAA	1 cut(s)	108
Psp6I	CCWGG	1 cut(s)	42
PspGI	CCWGG	1 cut(s)	42
PspPI	GGNCC	1 cut(s)	98
RsaI	GTAC	1 cut(s)	375
RsaNI	GTAC	1 cut(s)	374
RseI	CAYNNNNRTG	1 cut(s)	596
SaqAI	TTAA	5 cut(s)	17, 197, 233, 248, 440
SatI	GCNGC	3 cut(s)	48, 666, 675
Sau3AI	GATC	2 cut(s)	368, 490
Sau96I	GGNCC	1 cut(s)	98
ScrFI	CCNGG	1 cut(s)	44
SduI	GDGCHC	1 cut(s)	501
SfaNI	GCATC	1 cut(s)	44
SfcI	CTRYAG	2 cut(s)	424, 678
Sfr274I	CTCGAG	1 cut(s)	163
SinI	GGWCC	1 cut(s)	98
SlaI	CTCGAG	1 cut(s)	163
SmiMI	CAYNNNNRTG	1 cut(s)	596
SmlI	CTYRAG	1 cut(s)	163
SmoI	CTYRAG	1 cut(s)	163
SpeI	ACTAGT	1 cut(s)	347
Sse9I	AATT	7 cut(s)	116, 194, 234, 291, 315, 332, 502
SsiI	CCGC	1 cut(s)	665
SspMI	CTAG	3 cut(s)	255, 348, 684
StyD4I	CCNGG	1 cut(s)	42
TaiI	ACGT	1 cut(s)	10
TaqI	TCGA	1 cut(s)	164
TasI	AATT	7 cut(s)	116, 194, 234, 291, 315, 332, 502
TatI	WGTACW	1 cut(s)	373
TauI	GCSGC	1 cut(s)	668
Tru1I	TTAA	5 cut(s)	17, 197, 233, 248, 440
Tru9I	TTAA	5 cut(s)	17, 197, 233, 248, 440
TscAI	CASTG	1 cut(s)	676
TseI	GCWGC	2 cut(s)	47, 674
TspDTI	ATGAA	5 cut(s)	207, 225, 227, 296, 345
TspRI	CASTG	1 cut(s)	676
VpaK11BI	GGWCC	1 cut(s)	98
XapI	RAATTY	2 cut(s)	291, 315
XceI	RCATGY	1 cut(s)	380
XhoI	CTCGAG	1 cut(s)	163
XmiI	GTMKAC	1 cut(s)	423
XmnI	GAANNNNTTC	1 cut(s)	403
XspI	CTAG	3 cut(s)	255, 348, 684
ZraI	GACGTC	1 cut(s)	8
Zsp2I	ATGCAT	2 cut(s)	520, 561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.