Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

8408435 .. 8409466

Gene Structure 1032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G146900.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 549 bp

ATGTCAATGGCGGATGAGGTGGTGTTGTTGAACTACTGGGCCAGCCCTTATGGGATGAGGGTGAGAATCGCTCTGGCTGAGAAGGGTATTCAGTACGAGTCCAGGGAAGAGGACTACTTGTCCAACAAGAGCTCACTCTTGCTGCAGATGAACCCGGTTCACAAGAAGATCCCGGTTCTCATTCACAATGGCAAACCGGTCTCCGAGTCTCTCATTGCGGTTCAGTACATCGACCAGGTTTGGAAGGATAAGGCTCCTCTTTTGCCCTCTGATCCTTACCTTAGAGGCCAAGCCATGTTCTGGACTGACTTCGTTAACAAGAAGGTATATGAGAATAGAAAGAGGGCATGGAGAACCAAAGGAGAAGAACAGGAAGCAGCAAAGAGGGAATTCCTTGAGTGCACAAGGTTGTTAGAAGAAGAGCTTGGAGACAAGCCTTACCTTGGGCGTGAGAACCTCGGATTCGTGGACGTGGCACTTATTCCTACCTATAACTGGTTAAGTAGGCGAGAAATTTGGAAACTTCAGTGTGGAGGCAAAGCACCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

183

Amino Acids

21.19

Weight (kDa)

8.43

Isoelectric Point (pI)

47.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	300
AciI	CCGC	2 cut(s)	11, 218
AclWI	GGATC	2 cut(s)	163, 266
AcsI	RAATTY	2 cut(s)	389, 513
AcuI	CTGAAG	1 cut(s)	509
AfaI	GTAC	2 cut(s)	95, 227
AfiI	CCNNNNNNNGG	3 cut(s)	300, 443, 495
AgeI	ACCGGT	1 cut(s)	196
AgsI	TTSAA	1 cut(s)	31
AhdI	GACNNNNNGTC	1 cut(s)	118
AjiI	CACGTC	1 cut(s)	472
AjnI	CCWGG	2 cut(s)	101, 234
AjuI	GAANNNNNNNTTGG	2 cut(s)	408, 440
AluBI	AGCT	2 cut(s)	132, 424
AluI	AGCT	2 cut(s)	132, 424
Alw21I	GWGCWC	2 cut(s)	134, 404
Alw26I	GTCTC	3 cut(s)	205, 213, 423
Alw44I	GTGCAC	1 cut(s)	400
AlwI	GGATC	2 cut(s)	163, 266
AoxI	GGCC	2 cut(s)	39, 286
ApaLI	GTGCAC	1 cut(s)	400
ApeKI	GCWGC	2 cut(s)	142, 377
ApoI	RAATTY	2 cut(s)	389, 513
AsiGI	ACCGGT	1 cut(s)	196
AspS9I	GGNCC	1 cut(s)	39
AsuC2I	CCSGG	2 cut(s)	155, 173
AsuHPI	GGTGA	1 cut(s)	73
BaeGI	GKGCMC	1 cut(s)	404
BanII	GRGCYC	1 cut(s)	134
Bbv12I	GWGCWC	2 cut(s)	134, 404
BbvI	GCAGC	2 cut(s)	129, 389
BciT130I	CCWGG	2 cut(s)	103, 236
BcnI	CCSGG	2 cut(s)	155, 173
BcoDI	GTCTC	3 cut(s)	205, 213, 423
BfmI	CTRYAG	1 cut(s)	143
BisI	GCNGC	2 cut(s)	143, 378
BlsI	GCNGC	2 cut(s)	144, 379
Bme1390I	CCNGG	4 cut(s)	103, 155, 173, 236
BmeRI	GACNNNNNGTC	1 cut(s)	118
BmgBI	CACGTC	1 cut(s)	472
BmgT120I	GGNCC	1 cut(s)	39
BmiI	GGNNCC	1 cut(s)	255
BmrFI	CCNGG	4 cut(s)	103, 155, 173, 236
BmrI	ACTGGG	1 cut(s)	46
BmuI	ACTGGG	1 cut(s)	46
BplI	GAGNNNNNCTC	2 cut(s)	55, 87
BpuEI	CTTGAG	1 cut(s)	416
BpuMI	CCSGG	2 cut(s)	155, 173
BsaI	GGTCTC	1 cut(s)	205
BsaJI	CCNNGG	3 cut(s)	102, 442, 457
BsaWI	WCCGGW	1 cut(s)	196
Bsc4I	CCNNNNNNNGG	3 cut(s)	300, 443, 495
Bse118I	RCCGGY	1 cut(s)	196
Bse1I	ACTGG	2 cut(s)	41, 500
Bse3DI	GCAATG	1 cut(s)	213
BseBI	CCWGG	2 cut(s)	103, 236
BseDI	CCNNGG	3 cut(s)	102, 442, 457
BseGI	GGATG	2 cut(s)	19, 60
BseLI	CCNNNNNNNGG	3 cut(s)	300, 443, 495
BseMI	GCAATG	1 cut(s)	213
BseMII	CTCAG	1 cut(s)	69
BseNI	ACTGG	2 cut(s)	41, 500
BseRI	GAGGAG	1 cut(s)	246
BseSI	GKGCMC	1 cut(s)	404
BseXI	GCAGC	2 cut(s)	129, 389
BshFI	GGCC	2 cut(s)	41, 288
BshTI	ACCGGT	1 cut(s)	196
BsiHKAI	GWGCWC	2 cut(s)	134, 404
BsiSI	CCGG	3 cut(s)	155, 173, 197
BslI	CCNNNNNNNGG	3 cut(s)	300, 443, 495
BsmAI	GTCTC	3 cut(s)	205, 213, 423
BsnI	GGCC	2 cut(s)	41, 288
Bso31I	GGTCTC	1 cut(s)	205
Bsp1286I	GDGCHC	2 cut(s)	134, 404
Bsp143I	GATC	2 cut(s)	168, 271
BspACI	CCGC	2 cut(s)	11, 218
BspANI	GGCC	2 cut(s)	41, 288
BspCNI	CTCAG	1 cut(s)	70
BspLI	GGNNCC	1 cut(s)	255
BspMAI	CTGCAG	1 cut(s)	147
BspPI	GGATC	2 cut(s)	163, 266
BspQI	GCTCTTC	1 cut(s)	414
BspTNI	GGTCTC	1 cut(s)	205
BsrDI	GCAATG	1 cut(s)	213
BsrFI	RCCGGY	1 cut(s)	196
BsrI	ACTGG	2 cut(s)	41, 500
BssAI	RCCGGY	1 cut(s)	196
BssECI	CCNNGG	3 cut(s)	102, 442, 457
BssMI	GATC	2 cut(s)	168, 271
BssT1I	CCWWGG	1 cut(s)	442
Bst2UI	CCWGG	2 cut(s)	103, 236
Bst6I	CTCTTC	2 cut(s)	102, 414
BstC8I	GCNNGC	1 cut(s)	43
BstDEI	CTNAG	2 cut(s)	78, 281
BstF5I	GGATG	2 cut(s)	19, 60
BstKTI	GATC	2 cut(s)	171, 274
BstMAI	GTCTC	3 cut(s)	205, 213, 423
BstMBI	GATC	2 cut(s)	168, 271
BstNI	CCWGG	2 cut(s)	103, 236
BstSCI	CCNGG	4 cut(s)	101, 153, 171, 234
BstSFI	CTRYAG	1 cut(s)	143
BstSLI	GKGCMC	1 cut(s)	404
BstV1I	GCAGC	2 cut(s)	129, 389
BstX2I	RGATCY	1 cut(s)	168
BstYI	RGATCY	1 cut(s)	168
BsuRI	GGCC	2 cut(s)	41, 288
BtrI	CACGTC	1 cut(s)	472
BtsCI	GGATG	2 cut(s)	19, 60
BtsIMutI	CAGTG	1 cut(s)	533
Cac8I	GCNNGC	1 cut(s)	43
Cfr10I	RCCGGY	1 cut(s)	196
Cfr13I	GGNCC	1 cut(s)	39
CsiI	ACCWGGT	1 cut(s)	234
Csp6I	GTAC	2 cut(s)	94, 226
CspAI	ACCGGT	1 cut(s)	196
CviAII	CATG	2 cut(s)	295, 348
CviJI	RGCY	9 cut(s)	41, 45, 77, 132, 254, 288, 293, 424, 436
CviKI_1	RGCY	9 cut(s)	41, 45, 77, 132, 254, 288, 293, 424, 436
CviQI	GTAC	2 cut(s)	94, 226
DdeI	CTNAG	2 cut(s)	78, 281
DpnI	GATC	2 cut(s)	170, 273
DpnII	GATC	2 cut(s)	168, 271
DriI	GACNNNNNGTC	1 cut(s)	118
Eam1104I	CTCTTC	2 cut(s)	102, 414
Eam1105I	GACNNNNNGTC	1 cut(s)	118
EarI	CTCTTC	2 cut(s)	102, 414
EciI	GGCGGA	1 cut(s)	26
Ecl136II	GAGCTC	1 cut(s)	132
Eco130I	CCWWGG	1 cut(s)	442
Eco24I	GRGCYC	1 cut(s)	134
Eco31I	GGTCTC	1 cut(s)	205
Eco53kI	GAGCTC	1 cut(s)	132
Eco57I	CTGAAG	1 cut(s)	509
EcoICRI	GAGCTC	1 cut(s)	132
EcoRI	GAATTC	1 cut(s)	389
EcoRII	CCWGG	2 cut(s)	101, 234
EcoT14I	CCWWGG	1 cut(s)	442
EcoT38I	GRGCYC	1 cut(s)	134
ErhI	CCWWGG	1 cut(s)	442
FaeI	CATG	2 cut(s)	298, 351
FaiI	YATR	6 cut(s)	51, 296, 328, 330, 349, 492
FalI	AAGNNNNNCTT	2 cut(s)	408, 440
FatI	CATG	2 cut(s)	294, 347
Fnu4HI	GCNGC	2 cut(s)	143, 378
FokI	GGATG	2 cut(s)	26, 67
FriOI	GRGCYC	1 cut(s)	134
Fsp4HI	GCNGC	2 cut(s)	143, 378
GluI	GCNGC	2 cut(s)	143, 378
HaeIII	GGCC	2 cut(s)	41, 288
HapII	CCGG	3 cut(s)	155, 173, 197
Hin1II	CATG	2 cut(s)	298, 351
HincII	GTYRAC	1 cut(s)	316
HindII	GTYRAC	1 cut(s)	316
HinfI	GANTC	4 cut(s)	66, 98, 206, 462
HpaI	GTTAAC	1 cut(s)	316
HpaII	CCGG	3 cut(s)	155, 173, 197
HphI	GGTGA	1 cut(s)	73
Hpy166II	GTNNAC	4 cut(s)	160, 316, 402, 469
Hpy188I	TCNGA	3 cut(s)	205, 271, 461
Hpy188III	TCNNGA	1 cut(s)	301
Hpy8I	GTNNAC	4 cut(s)	160, 316, 402, 469
HpyAV	CCTTC	3 cut(s)	76, 238, 316
HpyCH4IV	ACGT	1 cut(s)	471
HpyCH4V	TGCA	2 cut(s)	145, 402
HpyF3I	CTNAG	2 cut(s)	78, 281
HpySE526I	ACGT	1 cut(s)	471
Hsp92II	CATG	2 cut(s)	298, 351
KspAI	GTTAAC	1 cut(s)	316
Kzo9I	GATC	2 cut(s)	168, 271
LguI	GCTCTTC	1 cut(s)	414
LmnI	GCTCC	1 cut(s)	259
Lsp1109I	GCAGC	2 cut(s)	129, 389
MabI	ACCWGGT	1 cut(s)	234
MaeII	ACGT	1 cut(s)	471
MalI	GATC	2 cut(s)	170, 273
MboI	GATC	2 cut(s)	168, 271
MboII	GAAGA	5 cut(s)	119, 178, 377, 428, 431
MflI	RGATCY	1 cut(s)	168
MhlI	GDGCHC	2 cut(s)	134, 404
MluCI	AATT	2 cut(s)	389, 513
MlyI	GAGTC	2 cut(s)	107, 215
MmeI	TCCRAC	1 cut(s)	147
MseI	TTAA	2 cut(s)	315, 500
MspI	CCGG	3 cut(s)	155, 173, 197
MspR9I	CCNGG	4 cut(s)	103, 155, 173, 236
MvaI	CCWGG	2 cut(s)	103, 236
NciI	CCSGG	2 cut(s)	155, 173
NdeII	GATC	2 cut(s)	168, 271
NlaIII	CATG	2 cut(s)	298, 351
NlaIV	GGNNCC	1 cut(s)	255
PciSI	GCTCTTC	1 cut(s)	414
PfeI	GAWTC	2 cut(s)	66, 462
PflMI	CCANNNNNTGG	1 cut(s)	300
PinAI	ACCGGT	1 cut(s)	196
PkrI	GCNGC	2 cut(s)	144, 379
PleI	GAGTC	2 cut(s)	106, 214
PpsI	GAGTC	2 cut(s)	106, 214
Psp124BI	GAGCTC	1 cut(s)	134
Psp6I	CCWGG	2 cut(s)	101, 234
PspGI	CCWGG	2 cut(s)	101, 234
PspN4I	GGNNCC	1 cut(s)	255
PspPI	GGNCC	1 cut(s)	39
PstI	CTGCAG	1 cut(s)	147
PsuI	RGATCY	1 cut(s)	168
RsaI	GTAC	2 cut(s)	95, 227
RsaNI	GTAC	2 cut(s)	94, 226
SacI	GAGCTC	1 cut(s)	134
SapI	GCTCTTC	1 cut(s)	414
SaqAI	TTAA	2 cut(s)	315, 500
SatI	GCNGC	2 cut(s)	143, 378
Sau3AI	GATC	2 cut(s)	168, 271
Sau96I	GGNCC	1 cut(s)	39
SchI	GAGTC	2 cut(s)	107, 215
ScrFI	CCNGG	4 cut(s)	103, 155, 173, 236
SduI	GDGCHC	2 cut(s)	134, 404
SexAI	ACCWGGT	1 cut(s)	234
SfcI	CTRYAG	1 cut(s)	143
SmlI	CTYRAG	1 cut(s)	395
SmoI	CTYRAG	1 cut(s)	395
Sse9I	AATT	2 cut(s)	389, 513
SsiI	CCGC	2 cut(s)	11, 218
SstI	GAGCTC	1 cut(s)	134
StyD4I	CCNGG	4 cut(s)	101, 153, 171, 234
StyI	CCWWGG	1 cut(s)	442
TaiI	ACGT	1 cut(s)	474
TaqI	TCGA	1 cut(s)	231
TasI	AATT	2 cut(s)	389, 513
TatI	WGTACW	1 cut(s)	225
TfiI	GAWTC	2 cut(s)	66, 462
Tru1I	TTAA	2 cut(s)	315, 500
Tru9I	TTAA	2 cut(s)	315, 500
TscAI	CASTG	1 cut(s)	533
TseI	GCWGC	2 cut(s)	142, 377
TspDTI	ATGAA	1 cut(s)	164
TspRI	CASTG	1 cut(s)	533
Van91I	CCANNNNNTGG	1 cut(s)	300
VneI	GTGCAC	1 cut(s)	400
XapI	RAATTY	2 cut(s)	389, 513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.