Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

8418512 .. 8420648

Gene Structure 2137 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G147100.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 669 bp

ATGTCAATGGCGGAAAAGGTGGTGTTGTTGAACTACTGGGCCAGCCCTTATGGGATGAGGGTGAGAATCGCTCTGGCAGAGAAGGGTATTCAGTACGAGTCCAGGGAAGAGGACTACTTGACCAACAAGAGCTCACTCTTGCTGCAGATGAACCCGGTTCACAAGAAGATCCCGGTTCTCATTCACAATGGCAAACCGGTCTCCGAGTCTCTCATTGCGGTTCAGTACATCGACGAGGTTTGGAAGGATAAGGCTCCTCTTTTGCCCTCTGATCCTTACCTTAGAGCCCAAGCCATGTTCTGGGCTGACTTCGTTGACAAGAAGGTATATGAGAGTGCAAAGAGGACATGGAGAACCAAAGGAGAAGAACAAGAAGCAGCAAAGAGGGAATTCCTTGAGTGCATAAGGTTGTTAGAAGAAGAGCTTGGAGACAAGCCTTACTTTGGGGGTGAGAATCTCGGATTCGTGGACGTGGCACTTATTCCTACCTATAGCTGGTTTTATGCGCGCGAGAAAATTGGAAACTTCAGTGTGGAGGCAAAGCACCCAAAGTTTATTGCATGGGCAAAGAGGTGCATGCAGAAGGAGAGTGTGTCCAAGTCTCTTCCTGACCAGAAAAGGGTCTACGAATTCGCCCTGCGCCTTCGGAGTAAACTTGGATTGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

223

Amino Acids

25.82

Weight (kDa)

8.85

Isoelectric Point (pI)

39.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	300
AccI	GTMKAC	1 cut(s)	624
AccII	CGCG	2 cut(s)	508, 510
AciI	CCGC	2 cut(s)	11, 218
AclWI	GGATC	2 cut(s)	163, 266
AcsI	RAATTY	2 cut(s)	389, 629
AcuI	CTGAAG	1 cut(s)	511
AfaI	GTAC	2 cut(s)	95, 227
AfiI	CCNNNNNNNGG	4 cut(s)	300, 443, 495, 619
AgeI	ACCGGT	1 cut(s)	196
AgsI	TTSAA	1 cut(s)	31
AjiI	CACGTC	1 cut(s)	472
AjnI	CCWGG	1 cut(s)	101
AjuI	GAANNNNNNNTTGG	2 cut(s)	408, 440
AluBI	AGCT	3 cut(s)	132, 424, 495
AluI	AGCT	3 cut(s)	132, 424, 495
Alw21I	GWGCWC	1 cut(s)	134
Alw26I	GTCTC	4 cut(s)	205, 213, 423, 606
AlwI	GGATC	2 cut(s)	163, 266
AoxI	GGCC	1 cut(s)	39
ApeKI	GCWGC	2 cut(s)	142, 377
ApoI	RAATTY	2 cut(s)	389, 629
AsiGI	ACCGGT	1 cut(s)	196
AspLEI	GCGC	3 cut(s)	508, 510, 642
AspS9I	GGNCC	1 cut(s)	39
AsuC2I	CCSGG	2 cut(s)	155, 173
AsuHPI	GGTGA	2 cut(s)	73, 461
BanII	GRGCYC	2 cut(s)	134, 289
Bbv12I	GWGCWC	1 cut(s)	134
BbvI	GCAGC	2 cut(s)	129, 389
BciT130I	CCWGG	1 cut(s)	103
BcnI	CCSGG	2 cut(s)	155, 173
BcoDI	GTCTC	4 cut(s)	205, 213, 423, 606
BfmI	CTRYAG	2 cut(s)	143, 490
BisI	GCNGC	2 cut(s)	143, 378
BlsI	GCNGC	2 cut(s)	144, 379
Bme1390I	CCNGG	3 cut(s)	103, 155, 173
BmgBI	CACGTC	1 cut(s)	472
BmgT120I	GGNCC	1 cut(s)	39
BmiI	GGNNCC	1 cut(s)	255
BmrFI	CCNGG	3 cut(s)	103, 155, 173
BmrI	ACTGGG	1 cut(s)	46
BmuI	ACTGGG	1 cut(s)	46
BplI	GAGNNNNNCTC	2 cut(s)	55, 87
BpuEI	CTTGAG	1 cut(s)	416
BpuMI	CCSGG	2 cut(s)	155, 173
BsaI	GGTCTC	1 cut(s)	205
BsaJI	CCNNGG	1 cut(s)	102
BsaWI	WCCGGW	1 cut(s)	196
BsaXI	ACNNNNNCTCC	2 cut(s)	578, 608
Bsc4I	CCNNNNNNNGG	4 cut(s)	300, 443, 495, 619
Bse118I	RCCGGY	1 cut(s)	196
Bse1I	ACTGG	1 cut(s)	41
Bse3DI	GCAATG	1 cut(s)	213
BseBI	CCWGG	1 cut(s)	103
BseDI	CCNNGG	1 cut(s)	102
BseGI	GGATG	1 cut(s)	60
BseLI	CCNNNNNNNGG	4 cut(s)	300, 443, 495, 619
BseMI	GCAATG	1 cut(s)	213
BseNI	ACTGG	1 cut(s)	41
BsePI	GCGCGC	1 cut(s)	506
BseRI	GAGGAG	1 cut(s)	246
BseXI	GCAGC	2 cut(s)	129, 389
Bsh1236I	CGCG	2 cut(s)	508, 510
BshFI	GGCC	1 cut(s)	41
BshTI	ACCGGT	1 cut(s)	196
BsiHKAI	GWGCWC	1 cut(s)	134
BsiSI	CCGG	3 cut(s)	155, 173, 197
BslI	CCNNNNNNNGG	4 cut(s)	300, 443, 495, 619
BsmAI	GTCTC	4 cut(s)	205, 213, 423, 606
BsnI	GGCC	1 cut(s)	41
Bso31I	GGTCTC	1 cut(s)	205
Bsp1286I	GDGCHC	2 cut(s)	134, 289
Bsp143I	GATC	2 cut(s)	168, 271
BspACI	CCGC	2 cut(s)	11, 218
BspANI	GGCC	1 cut(s)	41
BspFNI	CGCG	2 cut(s)	508, 510
BspLI	GGNNCC	1 cut(s)	255
BspMAI	CTGCAG	1 cut(s)	147
BspPI	GGATC	2 cut(s)	163, 266
BspQI	GCTCTTC	1 cut(s)	414
BspTNI	GGTCTC	1 cut(s)	205
BsrDI	GCAATG	1 cut(s)	213
BsrFI	RCCGGY	1 cut(s)	196
BsrI	ACTGG	1 cut(s)	41
BssAI	RCCGGY	1 cut(s)	196
BssECI	CCNNGG	1 cut(s)	102
BssHII	GCGCGC	1 cut(s)	506
BssMI	GATC	2 cut(s)	168, 271
Bst2UI	CCWGG	1 cut(s)	103
Bst6I	CTCTTC	3 cut(s)	102, 414, 609
BstC8I	GCNNGC	3 cut(s)	43, 508, 578
BstDEI	CTNAG	1 cut(s)	281
BstF5I	GGATG	1 cut(s)	60
BstFNI	CGCG	2 cut(s)	508, 510
BstHHI	GCGC	3 cut(s)	508, 510, 642
BstKTI	GATC	2 cut(s)	171, 274
BstMAI	GTCTC	4 cut(s)	205, 213, 423, 606
BstMBI	GATC	2 cut(s)	168, 271
BstNI	CCWGG	1 cut(s)	103
BstNSI	RCATGY	1 cut(s)	580
BstSCI	CCNGG	3 cut(s)	101, 153, 171
BstSFI	CTRYAG	2 cut(s)	143, 490
BstUI	CGCG	2 cut(s)	508, 510
BstV1I	GCAGC	2 cut(s)	129, 389
BstX2I	RGATCY	1 cut(s)	168
BstYI	RGATCY	1 cut(s)	168
BsuRI	GGCC	1 cut(s)	41
BtrI	CACGTC	1 cut(s)	472
BtsCI	GGATG	1 cut(s)	60
BtsIMutI	CAGTG	1 cut(s)	535
Cac8I	GCNNGC	3 cut(s)	43, 508, 578
CfoI	GCGC	3 cut(s)	508, 510, 642
Cfr10I	RCCGGY	1 cut(s)	196
Cfr13I	GGNCC	1 cut(s)	39
Csp6I	GTAC	2 cut(s)	94, 226
CspAI	ACCGGT	1 cut(s)	196
CviAII	CATG	4 cut(s)	295, 348, 561, 577
CviQI	GTAC	2 cut(s)	94, 226
DdeI	CTNAG	1 cut(s)	281
DpnI	GATC	2 cut(s)	170, 273
DpnII	GATC	2 cut(s)	168, 271
Eam1104I	CTCTTC	3 cut(s)	102, 414, 609
EarI	CTCTTC	3 cut(s)	102, 414, 609
EciI	GGCGGA	1 cut(s)	26
Ecl136II	GAGCTC	1 cut(s)	132
Eco24I	GRGCYC	2 cut(s)	134, 289
Eco31I	GGTCTC	1 cut(s)	205
Eco53kI	GAGCTC	1 cut(s)	132
Eco57I	CTGAAG	1 cut(s)	511
EcoICRI	GAGCTC	1 cut(s)	132
EcoRI	GAATTC	2 cut(s)	389, 629
EcoRII	CCWGG	1 cut(s)	101
EcoT38I	GRGCYC	2 cut(s)	134, 289
FaeI	CATG	4 cut(s)	298, 351, 564, 580
FalI	AAGNNNNNCTT	4 cut(s)	408, 440, 425, 457
FatI	CATG	4 cut(s)	294, 347, 560, 576
FblI	GTMKAC	1 cut(s)	624
Fnu4HI	GCNGC	2 cut(s)	143, 378
FokI	GGATG	1 cut(s)	67
FriOI	GRGCYC	2 cut(s)	134, 289
Fsp4HI	GCNGC	2 cut(s)	143, 378
GlaI	GCGC	3 cut(s)	507, 509, 641
GluI	GCNGC	2 cut(s)	143, 378
HaeIII	GGCC	1 cut(s)	41
HapII	CCGG	3 cut(s)	155, 173, 197
HhaI	GCGC	3 cut(s)	508, 510, 642
Hin1II	CATG	4 cut(s)	298, 351, 564, 580
Hin6I	GCGC	3 cut(s)	506, 508, 640
HinP1I	GCGC	3 cut(s)	506, 508, 640
HincII	GTYRAC	1 cut(s)	316
HindII	GTYRAC	1 cut(s)	316
HinfI	GANTC	5 cut(s)	66, 98, 206, 454, 462
HpaII	CCGG	3 cut(s)	155, 173, 197
HphI	GGTGA	2 cut(s)	73, 461
Hpy166II	GTNNAC	5 cut(s)	160, 316, 469, 625, 653
Hpy188I	TCNGA	4 cut(s)	205, 271, 461, 648
Hpy188III	TCNNGA	1 cut(s)	608
Hpy8I	GTNNAC	5 cut(s)	160, 316, 469, 625, 653
Hpy99I	CGWCG	1 cut(s)	236
HpyAV	CCTTC	5 cut(s)	76, 238, 316, 577, 653
HpyCH4IV	ACGT	1 cut(s)	471
HpyCH4V	TGCA	6 cut(s)	145, 338, 402, 560, 576, 580
HpyF3I	CTNAG	1 cut(s)	281
HpySE526I	ACGT	1 cut(s)	471
Hsp92II	CATG	4 cut(s)	298, 351, 564, 580
HspAI	GCGC	3 cut(s)	506, 508, 640
Kzo9I	GATC	2 cut(s)	168, 271
LguI	GCTCTTC	1 cut(s)	414
LmnI	GCTCC	1 cut(s)	259
Lsp1109I	GCAGC	2 cut(s)	129, 389
MaeII	ACGT	1 cut(s)	471
MalI	GATC	2 cut(s)	170, 273
MboI	GATC	2 cut(s)	168, 271
MboII	GAAGA	6 cut(s)	119, 178, 377, 428, 431, 596
MflI	RGATCY	1 cut(s)	168
MhlI	GDGCHC	2 cut(s)	134, 289
MluCI	AATT	3 cut(s)	389, 516, 629
MlyI	GAGTC	2 cut(s)	107, 215
MnlI	CCTC	9 cut(s)	51, 103, 229, 267, 277, 336, 378, 529, 564
MspI	CCGG	3 cut(s)	155, 173, 197
MspR9I	CCNGG	3 cut(s)	103, 155, 173
MvaI	CCWGG	1 cut(s)	103
MvnI	CGCG	2 cut(s)	508, 510
NciI	CCSGG	2 cut(s)	155, 173
NdeII	GATC	2 cut(s)	168, 271
NlaIII	CATG	4 cut(s)	298, 351, 564, 580
NlaIV	GGNNCC	1 cut(s)	255
NspI	RCATGY	1 cut(s)	580
PaeI	GCATGC	1 cut(s)	580
PauI	GCGCGC	1 cut(s)	506
PciSI	GCTCTTC	1 cut(s)	414
PfeI	GAWTC	3 cut(s)	66, 454, 462
PflMI	CCANNNNNTGG	1 cut(s)	300
PinAI	ACCGGT	1 cut(s)	196
PkrI	GCNGC	2 cut(s)	144, 379
PleI	GAGTC	2 cut(s)	106, 214
PpsI	GAGTC	2 cut(s)	106, 214
Psp124BI	GAGCTC	1 cut(s)	134
Psp6I	CCWGG	1 cut(s)	101
PspGI	CCWGG	1 cut(s)	101
PspN4I	GGNNCC	1 cut(s)	255
PspPI	GGNCC	1 cut(s)	39
PstI	CTGCAG	1 cut(s)	147
PsuI	RGATCY	1 cut(s)	168
PteI	GCGCGC	1 cut(s)	506
RsaI	GTAC	2 cut(s)	95, 227
RsaNI	GTAC	2 cut(s)	94, 226
SacI	GAGCTC	1 cut(s)	134
SapI	GCTCTTC	1 cut(s)	414
SatI	GCNGC	2 cut(s)	143, 378
Sau3AI	GATC	2 cut(s)	168, 271
Sau96I	GGNCC	1 cut(s)	39
SchI	GAGTC	2 cut(s)	107, 215
ScrFI	CCNGG	3 cut(s)	103, 155, 173
SduI	GDGCHC	2 cut(s)	134, 289
SfcI	CTRYAG	2 cut(s)	143, 490
SmlI	CTYRAG	1 cut(s)	395
SmoI	CTYRAG	1 cut(s)	395
SphI	GCATGC	1 cut(s)	580
Sse9I	AATT	3 cut(s)	389, 516, 629
SsiI	CCGC	2 cut(s)	11, 218
SstI	GAGCTC	1 cut(s)	134
StyD4I	CCNGG	3 cut(s)	101, 153, 171
TaiI	ACGT	1 cut(s)	474
TaqI	TCGA	1 cut(s)	231
TasI	AATT	3 cut(s)	389, 516, 629
TatI	WGTACW	1 cut(s)	225
TfiI	GAWTC	3 cut(s)	66, 454, 462
TscAI	CASTG	1 cut(s)	535
TseI	GCWGC	2 cut(s)	142, 377
TspDTI	ATGAA	1 cut(s)	164
TspRI	CASTG	1 cut(s)	535
Van91I	CCANNNNNTGG	1 cut(s)	300
XapI	RAATTY	2 cut(s)	389, 629
XceI	RCATGY	1 cut(s)	580
XmiI	GTMKAC	1 cut(s)	624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.