Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

8424559 .. 8425958

Gene Structure 1400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G147300.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 564 bp

ATGGCGGATGAGGTGGTGTTGTTGGACTACAGGGCCAGTCCTTATGGGATGAGAGTGAGAATCTTTCTGGCTGAGAAGGGCATTCACTCACTCTTGCTGCAGATGAACCCCTTTCACAAGAAGATCCCGGTTCTCATTCACAATGGCAAACCGGTCTCCGAGTCTCTCATTGCGGTTCAATACATTGACGAGGTTTGGAAGTATAAGGCTCCTCTATTGCCCTCTGATCCTTACCTTAGAGCCCAGCTGCCCAAGCCATCGCTGAGGTGTGAAATGAAGGTATATGAGAGTGGAAAGAAGACATCGAGAACCAAAGGAGAAGAACAGGAAGCAGCAAAGAGGGAATTCCTTGAGTGCATAAGGTTGTTAGAAGAAAAGCTTGGAGACGAGCCTTACTTTGGGAGTGAGAACCTCGGATTCGTAGAAGTGGCACTTATTCCTACCTATAGCTGGTTTTATGTGCGCGAGAAATTTGGAAACTTCAGTGTGGAGGCAAAGCACCCAAAGTTTATTGCATGGGCAAAGAGGTGCATGCAGAAGGAGAGTGTCCAAGTCTCTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

188

Amino Acids

21.62

Weight (kDa)

8.85

Isoelectric Point (pI)

39.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	465
AciI	CCGC	2 cut(s)	5, 173
AclWI	GGATC	2 cut(s)	118, 221
AcsI	RAATTY	2 cut(s)	344, 470
AcuI	CTGAAG	1 cut(s)	466
AfiI	CCNNNNNNNGG	2 cut(s)	398, 450
AgeI	ACCGGT	1 cut(s)	151
AgsI	TTSAA	1 cut(s)	179
AjuI	GAANNNNNNNTTGG	2 cut(s)	363, 395
AluBI	AGCT	3 cut(s)	247, 379, 450
AluI	AGCT	3 cut(s)	247, 379, 450
Alw26I	GTCTC	4 cut(s)	160, 168, 378, 559
AlwI	GGATC	2 cut(s)	118, 221
AoxI	GGCC	1 cut(s)	33
ApeKI	GCWGC	3 cut(s)	97, 247, 332
ApoI	RAATTY	2 cut(s)	344, 470
AsiGI	ACCGGT	1 cut(s)	151
AspLEI	GCGC	1 cut(s)	465
AspS9I	GGNCC	1 cut(s)	33
AsuC2I	CCSGG	1 cut(s)	128
BanII	GRGCYC	1 cut(s)	244
BbsI	GAAGAC	1 cut(s)	305
BbvCI	CCTCAGC	1 cut(s)	263
BbvI	GCAGC	3 cut(s)	84, 234, 344
BccI	CCATC	1 cut(s)	265
BcnI	CCSGG	1 cut(s)	128
BcoDI	GTCTC	4 cut(s)	160, 168, 378, 559
BfmI	CTRYAG	3 cut(s)	28, 98, 445
BisI	GCNGC	3 cut(s)	98, 248, 333
BlsI	GCNGC	3 cut(s)	99, 249, 334
Bme1390I	CCNGG	1 cut(s)	128
BmgT120I	GGNCC	1 cut(s)	33
BmiI	GGNNCC	1 cut(s)	210
BmrFI	CCNGG	1 cut(s)	128
BpiI	GAAGAC	1 cut(s)	305
Bpu10I	CCTNAGC	1 cut(s)	263
BpuEI	CTTGAG	1 cut(s)	371
BpuMI	CCSGG	1 cut(s)	128
BsaI	GGTCTC	1 cut(s)	160
BsaJI	CCNNGG	1 cut(s)	412
BsaWI	WCCGGW	1 cut(s)	151
Bsc4I	CCNNNNNNNGG	2 cut(s)	398, 450
Bse118I	RCCGGY	1 cut(s)	151
Bse1I	ACTGG	1 cut(s)	36
Bse3DI	GCAATG	1 cut(s)	168
BseDI	CCNNGG	1 cut(s)	412
BseGI	GGATG	2 cut(s)	13, 54
BseLI	CCNNNNNNNGG	2 cut(s)	398, 450
BseMI	GCAATG	1 cut(s)	168
BseMII	CTCAG	2 cut(s)	63, 254
BseNI	ACTGG	1 cut(s)	36
BseRI	GAGGAG	1 cut(s)	201
BseXI	GCAGC	3 cut(s)	84, 234, 344
BseYI	CCCAGC	1 cut(s)	243
Bsh1236I	CGCG	1 cut(s)	465
BshFI	GGCC	1 cut(s)	35
BshTI	ACCGGT	1 cut(s)	151
BsiSI	CCGG	2 cut(s)	128, 152
BslI	CCNNNNNNNGG	2 cut(s)	398, 450
BsmAI	GTCTC	4 cut(s)	160, 168, 378, 559
BsmBI	CGTCTC	1 cut(s)	378
BsmI	GAATGC	1 cut(s)	81
BsnI	GGCC	1 cut(s)	35
Bso31I	GGTCTC	1 cut(s)	160
Bsp1286I	GDGCHC	1 cut(s)	244
Bsp143I	GATC	2 cut(s)	123, 226
BspACI	CCGC	2 cut(s)	5, 173
BspANI	GGCC	1 cut(s)	35
BspCNI	CTCAG	2 cut(s)	64, 255
BspFNI	CGCG	1 cut(s)	465
BspLI	GGNNCC	1 cut(s)	210
BspMAI	CTGCAG	1 cut(s)	102
BspPI	GGATC	2 cut(s)	118, 221
BspTNI	GGTCTC	1 cut(s)	160
BsrDI	GCAATG	1 cut(s)	168
BsrFI	RCCGGY	1 cut(s)	151
BsrI	ACTGG	1 cut(s)	36
BssAI	RCCGGY	1 cut(s)	151
BssECI	CCNNGG	1 cut(s)	412
BssMI	GATC	2 cut(s)	123, 226
BstC8I	GCNNGC	1 cut(s)	533
BstDEI	CTNAG	3 cut(s)	72, 236, 263
BstF5I	GGATG	2 cut(s)	13, 54
BstFNI	CGCG	1 cut(s)	465
BstHHI	GCGC	1 cut(s)	465
BstKTI	GATC	2 cut(s)	126, 229
BstMAI	GTCTC	4 cut(s)	160, 168, 378, 559
BstMBI	GATC	2 cut(s)	123, 226
BstMWI	GCNNNNNNNGC	1 cut(s)	253
BstNSI	RCATGY	1 cut(s)	535
BstSCI	CCNGG	1 cut(s)	126
BstSFI	CTRYAG	3 cut(s)	28, 98, 445
BstUI	CGCG	1 cut(s)	465
BstV1I	GCAGC	3 cut(s)	84, 234, 344
BstV2I	GAAGAC	1 cut(s)	305
BstX2I	RGATCY	1 cut(s)	123
BstYI	RGATCY	1 cut(s)	123
BsuRI	GGCC	1 cut(s)	35
BtgZI	GCGATG	1 cut(s)	243
BtsCI	GGATG	2 cut(s)	13, 54
BtsIMutI	CAGTG	1 cut(s)	490
Cac8I	GCNNGC	1 cut(s)	533
CfoI	GCGC	1 cut(s)	465
Cfr10I	RCCGGY	1 cut(s)	151
Cfr13I	GGNCC	1 cut(s)	33
CspAI	ACCGGT	1 cut(s)	151
CviAII	CATG	2 cut(s)	516, 532
CviJI	RGCY	9 cut(s)	35, 71, 209, 242, 247, 256, 379, 391, 450
CviKI_1	RGCY	9 cut(s)	35, 71, 209, 242, 247, 256, 379, 391, 450
DdeI	CTNAG	3 cut(s)	72, 236, 263
DpnI	GATC	2 cut(s)	125, 228
DpnII	GATC	2 cut(s)	123, 226
EciI	GGCGGA	1 cut(s)	20
Eco24I	GRGCYC	1 cut(s)	244
Eco31I	GGTCTC	1 cut(s)	160
Eco57I	CTGAAG	1 cut(s)	466
EcoRI	GAATTC	1 cut(s)	344
EcoT38I	GRGCYC	1 cut(s)	244
Esp3I	CGTCTC	1 cut(s)	378
FaeI	CATG	2 cut(s)	519, 535
FaiI	YATR	9 cut(s)	45, 204, 283, 285, 359, 447, 459, 517, 533
FalI	AAGNNNNNCTT	4 cut(s)	363, 395, 417, 449
FatI	CATG	2 cut(s)	515, 531
Fnu4HI	GCNGC	3 cut(s)	98, 248, 333
FokI	GGATG	2 cut(s)	20, 61
FriOI	GRGCYC	1 cut(s)	244
Fsp4HI	GCNGC	3 cut(s)	98, 248, 333
GlaI	GCGC	1 cut(s)	464
GluI	GCNGC	3 cut(s)	98, 248, 333
GsaI	CCCAGC	1 cut(s)	247
HaeIII	GGCC	1 cut(s)	35
HapII	CCGG	2 cut(s)	128, 152
HhaI	GCGC	1 cut(s)	465
Hin1II	CATG	2 cut(s)	519, 535
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HindIII	AAGCTT	1 cut(s)	377
HinfI	GANTC	3 cut(s)	60, 161, 417
HpaII	CCGG	2 cut(s)	128, 152
Hpy188I	TCNGA	3 cut(s)	160, 226, 416
Hpy188III	TCNNGA	2 cut(s)	306, 561
HpyAV	CCTTC	3 cut(s)	70, 271, 532
HpyCH4V	TGCA	5 cut(s)	100, 357, 515, 531, 535
HpyF10VI	GCNNNNNNNGC	1 cut(s)	253
HpyF3I	CTNAG	3 cut(s)	72, 236, 263
Hsp92II	CATG	2 cut(s)	519, 535
HspAI	GCGC	1 cut(s)	463
Kzo9I	GATC	2 cut(s)	123, 226
LmnI	GCTCC	1 cut(s)	214
LpnPI	CCDG	8 cut(s)	16, 49, 53, 141, 165, 257, 311, 436
Lsp1109I	GCAGC	3 cut(s)	84, 234, 344
MalI	GATC	2 cut(s)	125, 228
MboI	GATC	2 cut(s)	123, 226
MboII	GAAGA	5 cut(s)	133, 310, 332, 383, 549
MflI	RGATCY	1 cut(s)	123
MhlI	GDGCHC	1 cut(s)	244
MluCI	AATT	2 cut(s)	344, 470
MlyI	GAGTC	1 cut(s)	170
MnlI	CCTC	9 cut(s)	4, 184, 222, 232, 258, 333, 422, 484, 519
MspA1I	CMGCKG	1 cut(s)	247
MspI	CCGG	2 cut(s)	128, 152
MspR9I	CCNGG	1 cut(s)	128
Mva1269I	GAATGC	1 cut(s)	81
MvnI	CGCG	1 cut(s)	465
MwoI	GCNNNNNNNGC	1 cut(s)	253
NciI	CCSGG	1 cut(s)	128
NdeII	GATC	2 cut(s)	123, 226
NlaIII	CATG	2 cut(s)	519, 535
NlaIV	GGNNCC	1 cut(s)	210
NspI	RCATGY	1 cut(s)	535
PaeI	GCATGC	1 cut(s)	535
PctI	GAATGC	1 cut(s)	81
PfeI	GAWTC	2 cut(s)	60, 417
PinAI	ACCGGT	1 cut(s)	151
PkrI	GCNGC	3 cut(s)	99, 249, 334
PleI	GAGTC	1 cut(s)	169
PpsI	GAGTC	1 cut(s)	169
PspFI	CCCAGC	1 cut(s)	243
PspN4I	GGNNCC	1 cut(s)	210
PspPI	GGNCC	1 cut(s)	33
PstI	CTGCAG	1 cut(s)	102
PsuI	RGATCY	1 cut(s)	123
PvuII	CAGCTG	1 cut(s)	247
SatI	GCNGC	3 cut(s)	98, 248, 333
Sau3AI	GATC	2 cut(s)	123, 226
Sau96I	GGNCC	1 cut(s)	33
SchI	GAGTC	1 cut(s)	170
ScrFI	CCNGG	1 cut(s)	128
SduI	GDGCHC	1 cut(s)	244
SfcI	CTRYAG	3 cut(s)	28, 98, 445
SmlI	CTYRAG	1 cut(s)	350
SmoI	CTYRAG	1 cut(s)	350
SphI	GCATGC	1 cut(s)	535
Sse9I	AATT	2 cut(s)	344, 470
SsiI	CCGC	2 cut(s)	5, 173
StyD4I	CCNGG	1 cut(s)	126
TaqI	TCGA	1 cut(s)	305
TasI	AATT	2 cut(s)	344, 470
TfiI	GAWTC	2 cut(s)	60, 417
TscAI	CASTG	1 cut(s)	490
TseI	GCWGC	3 cut(s)	97, 247, 332
TspDTI	ATGAA	2 cut(s)	119, 290
TspRI	CASTG	1 cut(s)	490
XapI	RAATTY	2 cut(s)	344, 470
XceI	RCATGY	1 cut(s)	535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.