Prupe.4G153100_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Forward (+)
8778844 .. 8781874
3031 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G153100.1_v2.0.a1.CDS.5

Sequence Viewer

Length: 1110 bp
ATGGAAATCTCAGTGAGCTCCATGGTTGTGGCCATTCTTTGTGTGGGTTTAAATACATTGGGGTGGAAAGTAGTCAACTGGGTTTGGTTGAAGCCGAAGAAGCTAGAAAGCTACGACGGTGACAAATGGGTCAAGCATAGAAGGATCATCAACCCAGCTTTCCACATAGACAAGATGAAGGACATGTTACCTGCATTTCATGCCGCTAGTGAAAACATGTTGAGCAAATGGGAGATGCGTTTCTCATCAACGGAGACATGTGAGTTGGATGTGTGGCCTTATCTTTGCGCTTTTTCCGGCGATGTGATTTCCTGCTGCATTCGGTATAACTTTGAAGAAGGAGAAAGGTTCTTCAAGCTCCAAAAGGAACAAGGTGCTCTGACGCGAAGTTCTGAACTCAGTCCACATACCACTGTTGAGGGTTTTCCCAAACCTCGATTAGGAAAACGGTATGATTTATTAAGAGCTGCAACTACATATCAATGTGCATGCAGGTTTCTGCCAACTAAAATGAACAGGAGCATGAAACAGATCTCCAATGAAATGGCTATTTGTCTGAGGGAAATTATCAACAAAAGAGAGAAGGCAATGAGGGCAGGAGAAGCCACAGAAGATGATTTGTTGGGTATACTTCTGAAATCCAATTTCAGTGAAATTCAAGAGCATGGAGATGACAAGGATGTTGGAATGAGCATCGAAGAAGGGATTGAAGAATGCAAAGTGTTCTACTTAGCTGGAGAAGACACAACCAAAGATTTGATTAACTGGACACTGGTTCTGTTGGGCAAGCATCAAGACTGGCAAAGGCGTGCAAGAGAAGAGGTTGTGCAAATTTTTAAGAACAACAAACCAGACTATGCTGGCTTAAACCGCTTAAAAATTGTGGACATGATTCTGTATGAGGTCCTTAGGTTGTACCCACCAGCCATTTTCACAACCCGAGAGATTACTAAGGAGACCAAATTAGGAGACATTTCTCTACCACCAGGTGTGCAGCTTGCAGTGCCAATTCTCTTTGTCCATCATGACAAAGAAATCTGGGGCGATGATGTCCACAAATTCAAGCCGGAGAGGTTCTCAGAAGGCGTCTCGAAGGCATCAAAGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
ko00908 ko01100 ko01110 map00908 map01100 map01110
Pfam Domains
Protein Families
p450

Protein Analysis

370

Amino Acids

42.54

Weight (kDa)

7.1

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 128
Acc36I ACCTGC 2 cut(s) 199, 483
AccI GTMKAC 1 cut(s) 628
AccII CGCG 1 cut(s) 385
AciI CCGC 2 cut(s) 204, 871
AclWI GGATC 1 cut(s) 152
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 3 cut(s) 654, 831, 1058
AcyI GRCGYC 1 cut(s) 1086
AdeI CACNNNGTG 1 cut(s) 989
AfaI GTAC 1 cut(s) 917
AfiI CCNNNNNNNGG 1 cut(s) 440
AflIII ACRYGT 3 cut(s) 183, 216, 257
AgsI TTSAA 6 cut(s) 91, 335, 355, 659, 710, 1063
AjnI CCWGG 1 cut(s) 985
AluBI AGCT 8 cut(s) 18, 103, 111, 158, 358, 467, 734, 997
AluI AGCT 8 cut(s) 18, 103, 111, 158, 358, 467, 734, 997
Alw21I GWGCWC 2 cut(s) 20, 379
Alw26I GTCTC 4 cut(s) 248, 950, 963, 1093
AlwI GGATC 1 cut(s) 152
Ama87I CYCGRG 1 cut(s) 939
AoxI GGCC 2 cut(s) 30, 275
ApeKI GCWGC 3 cut(s) 315, 467, 994
ApoI RAATTY 3 cut(s) 654, 831, 1058
AspLEI GCGC 1 cut(s) 290
AspS9I GGNCC 1 cut(s) 904
AsuHPI GGTGA 1 cut(s) 131
AvaI CYCGRG 1 cut(s) 939
AvaII GGWCC 1 cut(s) 904
AxyI CCTNAGG 1 cut(s) 908
BalI TGGCCA 1 cut(s) 32
BanII GRGCYC 1 cut(s) 20
BbsI GAAGAC 1 cut(s) 747
Bbv12I GWGCWC 2 cut(s) 20, 379
BbvI GCAGC 3 cut(s) 302, 454, 1006
BccI CCATC 1 cut(s) 1029
BciT130I CCWGG 1 cut(s) 987
BcoDI GTCTC 4 cut(s) 248, 950, 963, 1093
BfaI CTAG 2 cut(s) 104, 207
BfuAI ACCTGC 2 cut(s) 199, 483
BglII AGATCT 1 cut(s) 531
BisI GCNGC 4 cut(s) 204, 316, 468, 995
BlsI GCNGC 4 cut(s) 205, 317, 469, 996
Bme1390I CCNGG 1 cut(s) 987
Bme18I GGWCC 1 cut(s) 904
BmeT110I CYCGRG 1 cut(s) 939
BmgT120I GGNCC 1 cut(s) 904
BmrFI CCNGG 1 cut(s) 987
BmrI ACTGGG 1 cut(s) 88
BmsI GCATC 4 cut(s) 225, 702, 799, 1106
BmuI ACTGGG 1 cut(s) 88
BpiI GAAGAC 1 cut(s) 747
BplI GAGNNNNNCTC 2 cut(s) 1061, 1093
BpmI CTGGAG 1 cut(s) 756
BsaHI GRCGYC 1 cut(s) 1086
BsaI GGTCTC 1 cut(s) 950
BsaJI CCNNGG 1 cut(s) 21
Bsc4I CCNNNNNNNGG 1 cut(s) 440
Bse1I ACTGG 4 cut(s) 83, 770, 777, 803
Bse21I CCTNAGG 1 cut(s) 908
Bse3DI GCAATG 1 cut(s) 594
BseBI CCWGG 1 cut(s) 987
BseDI CCNNGG 1 cut(s) 21
BseGI GGATG 2 cut(s) 274, 685
BseLI CCNNNNNNNGG 1 cut(s) 440
BseMI GCAATG 1 cut(s) 594
BseMII CTCAG 4 cut(s) 24, 412, 548, 1092
BseNI ACTGG 4 cut(s) 83, 770, 777, 803
BseXI GCAGC 3 cut(s) 302, 454, 1006
BseYI CCCAGC 1 cut(s) 154
BsgI GTGCAG 1 cut(s) 1013
Bsh1236I CGCG 1 cut(s) 385
BshFI GGCC 2 cut(s) 32, 277
BsiHKAI GWGCWC 2 cut(s) 20, 379
BsiHKCI CYCGRG 1 cut(s) 939
BsiSI CCGG 2 cut(s) 297, 1067
BslI CCNNNNNNNGG 1 cut(s) 440
BsmAI GTCTC 4 cut(s) 248, 950, 963, 1093
BsmBI CGTCTC 1 cut(s) 1093
BsmI GAATGC 2 cut(s) 318, 719
BsnI GGCC 2 cut(s) 32, 277
Bso31I GGTCTC 1 cut(s) 950
BsoBI CYCGRG 1 cut(s) 939
Bsp1286I GDGCHC 2 cut(s) 20, 379
Bsp143I GATC 2 cut(s) 144, 531
Bsp19I CCATGG 1 cut(s) 21
BspACI CCGC 2 cut(s) 204, 871
BspANI GGCC 2 cut(s) 32, 277
BspCNI CTCAG 4 cut(s) 23, 411, 549, 1091
BspFNI CGCG 1 cut(s) 385
BspHI TCATGA 1 cut(s) 1024
BspMI ACCTGC 2 cut(s) 199, 483
BspPI GGATC 1 cut(s) 152
BspTNI GGTCTC 1 cut(s) 950
BsrDI GCAATG 1 cut(s) 594
BsrI ACTGG 4 cut(s) 83, 770, 777, 803
BssECI CCNNGG 1 cut(s) 21
BssMI GATC 2 cut(s) 144, 531
BssNAI GTATAC 1 cut(s) 629
BssNI GRCGYC 1 cut(s) 1086
BssT1I CCWWGG 1 cut(s) 21
Bst1107I GTATAC 1 cut(s) 629
Bst2UI CCWGG 1 cut(s) 987
Bst4CI ACNGT 3 cut(s) 119, 415, 450
Bst6I CTCTTC 1 cut(s) 813
BstACI GRCGYC 1 cut(s) 1086
BstAPI GCANNNNNTGC 1 cut(s) 200
BstC8I GCNNGC 5 cut(s) 490, 788, 810, 862, 999
BstDEI CTNAG 7 cut(s) 10, 398, 557, 730, 908, 951, 1078
BstDSI CCRYGG 1 cut(s) 21
BstENI CCTNNNNNAGG 1 cut(s) 438
BstF5I GGATG 2 cut(s) 274, 685
BstFNI CGCG 1 cut(s) 385
BstHHI GCGC 1 cut(s) 290
BstKTI GATC 2 cut(s) 147, 534
BstMAI GTCTC 4 cut(s) 248, 950, 963, 1093
BstMBI GATC 2 cut(s) 144, 531
BstMWI GCNNNNNNNGC 6 cut(s) 100, 200, 593, 602, 870, 1003
BstNI CCWGG 1 cut(s) 987
BstNSI RCATGY 4 cut(s) 187, 220, 261, 492
BstSCI CCNGG 1 cut(s) 985
BstUI CGCG 1 cut(s) 385
BstV1I GCAGC 3 cut(s) 302, 454, 1006
BstV2I GAAGAC 1 cut(s) 747
BstX2I RGATCY 1 cut(s) 531
BstXI CCANNNNNNTGG 2 cut(s) 28, 544
BstYI RGATCY 1 cut(s) 531
BstZ17I GTATAC 1 cut(s) 629
Bsu36I CCTNAGG 1 cut(s) 908
BsuRI GGCC 2 cut(s) 32, 277
BtgI CCRYGG 1 cut(s) 21
BtgZI GCGATG 2 cut(s) 315, 1059
BtsCI GGATG 2 cut(s) 274, 685
BtsI GCAGTG 1 cut(s) 1008
BtsIMutI CAGTG 5 cut(s) 18, 411, 655, 770, 1008
BveI ACCTGC 2 cut(s) 199, 483
Cac8I GCNNGC 5 cut(s) 490, 788, 810, 862, 999
CciI TCATGA 1 cut(s) 1024
CfoI GCGC 1 cut(s) 290
Cfr13I GGNCC 1 cut(s) 904
CseI GACGC 2 cut(s) 391, 1075
CsiI ACCWGGT 1 cut(s) 985
Csp6I GTAC 1 cut(s) 916
CviQI GTAC 1 cut(s) 916
DdeI CTNAG 7 cut(s) 10, 398, 557, 730, 908, 951, 1078
DpnI GATC 2 cut(s) 146, 533
DpnII GATC 2 cut(s) 144, 531
DraI TTTAAA 1 cut(s) 51
DraIII CACNNNGTG 1 cut(s) 989
DrdI GACNNNNNNGTC 1 cut(s) 128
DseDI GACNNNNNNGTC 1 cut(s) 128
EaeI YGGCCR 1 cut(s) 30
Eam1104I CTCTTC 1 cut(s) 813
EarI CTCTTC 1 cut(s) 813
Ecl136II GAGCTC 1 cut(s) 18
Eco130I CCWWGG 1 cut(s) 21
Eco24I GRGCYC 1 cut(s) 20
Eco31I GGTCTC 1 cut(s) 950
Eco47I GGWCC 1 cut(s) 904
Eco53kI GAGCTC 1 cut(s) 18
Eco81I CCTNAGG 1 cut(s) 908
Eco88I CYCGRG 1 cut(s) 939
EcoICRI GAGCTC 1 cut(s) 18
EcoNI CCTNNNNNAGG 1 cut(s) 438
EcoO109I RGGNCCY 1 cut(s) 904
EcoRII CCWGG 1 cut(s) 985
EcoT14I CCWWGG 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 20
ErhI CCWWGG 1 cut(s) 21
Esp3I CGTCTC 1 cut(s) 1093
FblI GTMKAC 1 cut(s) 628
Fnu4HI GCNGC 4 cut(s) 204, 316, 468, 995
FokI GGATG 2 cut(s) 281, 692
FriOI GRGCYC 1 cut(s) 20
Fsp4HI GCNGC 4 cut(s) 204, 316, 468, 995
FspBI CTAG 2 cut(s) 104, 207
GlaI GCGC 1 cut(s) 289
GluI GCNGC 4 cut(s) 204, 316, 468, 995
GsaI CCCAGC 1 cut(s) 158
GsuI CTGGAG 1 cut(s) 756
HaeIII GGCC 2 cut(s) 32, 277
HapII CCGG 2 cut(s) 297, 1067
HgaI GACGC 2 cut(s) 391, 1075
HhaI GCGC 1 cut(s) 290
Hin1I GRCGYC 1 cut(s) 1086
Hin6I GCGC 1 cut(s) 288
HinP1I GCGC 1 cut(s) 288
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HinfI GANTC 1 cut(s) 892
HpaII CCGG 2 cut(s) 297, 1067
HphI GGTGA 1 cut(s) 131
Hpy166II GTNNAC 5 cut(s) 76, 404, 629, 886, 1054
Hpy188I TCNGA 5 cut(s) 381, 394, 558, 636, 1081
Hpy188III TCNNGA 4 cut(s) 659, 794, 1025, 1090
Hpy8I GTNNAC 5 cut(s) 76, 404, 629, 886, 1054
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 7 cut(s) 135, 172, 332, 577, 695, 1076, 1087
HpyCH4III ACNGT 3 cut(s) 119, 415, 450
HpyF10VI GCNNNNNNNGC 6 cut(s) 100, 200, 593, 602, 870, 1003
HpyF3I CTNAG 7 cut(s) 10, 398, 557, 730, 908, 951, 1078
Hsp92I GRCGYC 1 cut(s) 1086
HspAI GCGC 1 cut(s) 288
Kzo9I GATC 2 cut(s) 144, 531
LmnI GCTCC 3 cut(s) 23, 363, 519
Lsp1109I GCAGC 3 cut(s) 302, 454, 1006
LweI GCATC 4 cut(s) 225, 702, 799, 1106
MabI ACCWGGT 1 cut(s) 985
MaeI CTAG 2 cut(s) 104, 207
MaeIII GTNAC 2 cut(s) 119, 186
MalI GATC 2 cut(s) 146, 533
MboI GATC 2 cut(s) 144, 531
MboII GAAGA 8 cut(s) 109, 343, 347, 623, 710, 722, 752, 830
MflI RGATCY 1 cut(s) 531
MhlI GDGCHC 2 cut(s) 20, 379
MlsI TGGCCA 1 cut(s) 32
MluCI AATT 9 cut(s) 564, 643, 654, 831, 879, 962, 1008, 1058, 1105
MluNI TGGCCA 1 cut(s) 32
MmeI TCCRAC 2 cut(s) 246, 664
MnlI CCTC 7 cut(s) 412, 444, 552, 585, 814, 895, 1065
Mox20I TGGCCA 1 cut(s) 32
MscI TGGCCA 1 cut(s) 32
MseI TTAA 7 cut(s) 50, 461, 762, 837, 866, 875, 1108
MslI CAYNNNNRTG 4 cut(s) 26, 61, 481, 669
Msp20I TGGCCA 1 cut(s) 32
MspI CCGG 2 cut(s) 297, 1067
MspR9I CCNGG 1 cut(s) 987
Mva1269I GAATGC 2 cut(s) 318, 719
MvaI CCWGG 1 cut(s) 987
MvnI CGCG 1 cut(s) 385
MwoI GCNNNNNNNGC 6 cut(s) 100, 200, 593, 602, 870, 1003
NcoI CCATGG 1 cut(s) 21
NdeII GATC 2 cut(s) 144, 531
NmuCI GTSAC 1 cut(s) 119
NspI RCATGY 4 cut(s) 187, 220, 261, 492
PaeI GCATGC 1 cut(s) 492
PagI TCATGA 1 cut(s) 1024
PciI ACATGT 3 cut(s) 183, 216, 257
PctI GAATGC 2 cut(s) 318, 719
PfeI GAWTC 1 cut(s) 892
PkrI GCNGC 4 cut(s) 205, 317, 469, 996
PpuMI RGGWCCY 1 cut(s) 904
PscI ACATGT 3 cut(s) 183, 216, 257
Psp124BI GAGCTC 1 cut(s) 20
Psp5II RGGWCCY 1 cut(s) 904
Psp6I CCWGG 1 cut(s) 985
PspFI CCCAGC 1 cut(s) 154
PspGI CCWGG 1 cut(s) 985
PspPI GGNCC 1 cut(s) 904
PspPPI RGGWCCY 1 cut(s) 904
PsuI RGATCY 1 cut(s) 531
RsaI GTAC 1 cut(s) 917
RsaNI GTAC 1 cut(s) 916
RseI CAYNNNNRTG 4 cut(s) 26, 61, 481, 669
SacI GAGCTC 1 cut(s) 20
SaqAI TTAA 7 cut(s) 50, 461, 762, 837, 866, 875, 1108
SatI GCNGC 4 cut(s) 204, 316, 468, 995
Sau3AI GATC 2 cut(s) 144, 531
Sau96I GGNCC 1 cut(s) 904
ScrFI CCNGG 1 cut(s) 987
SduI GDGCHC 2 cut(s) 20, 379
SexAI ACCWGGT 1 cut(s) 985
SfaNI GCATC 4 cut(s) 225, 702, 799, 1106
SinI GGWCC 1 cut(s) 904
SmiMI CAYNNNNRTG 4 cut(s) 26, 61, 481, 669
SphI GCATGC 1 cut(s) 492
Sse9I AATT 9 cut(s) 564, 643, 654, 831, 879, 962, 1008, 1058, 1105
SsiI CCGC 2 cut(s) 204, 871
SspMI CTAG 2 cut(s) 104, 207
SstI GAGCTC 1 cut(s) 20
StyD4I CCNGG 1 cut(s) 985
StyI CCWWGG 1 cut(s) 21
TaaI ACNGT 3 cut(s) 119, 415, 450
TaqI TCGA 3 cut(s) 436, 696, 1091
TasI AATT 9 cut(s) 564, 643, 654, 831, 879, 962, 1008, 1058, 1105
TauI GCSGC 1 cut(s) 206
TfiI GAWTC 1 cut(s) 892
Tru1I TTAA 7 cut(s) 50, 461, 762, 837, 866, 875, 1108
Tru9I TTAA 7 cut(s) 50, 461, 762, 837, 866, 875, 1108
TscAI CASTG 5 cut(s) 18, 418, 655, 777, 1008
TseFI GTSAC 1 cut(s) 119
TseI GCWGC 3 cut(s) 315, 467, 994
Tsp45I GTSAC 1 cut(s) 119
TspDTI ATGAA 5 cut(s) 188, 191, 527, 539, 555
TspGWI ACGGA 1 cut(s) 266
TspRI CASTG 5 cut(s) 18, 418, 655, 777, 1008
VpaK11BI GGWCC 1 cut(s) 904
XagI CCTNNNNNAGG 1 cut(s) 438
XapI RAATTY 3 cut(s) 654, 831, 1058
XceI RCATGY 4 cut(s) 187, 220, 261, 492
XcmI CCANNNNNNNNNTGG 1 cut(s) 40
XmiI GTMKAC 1 cut(s) 628
XspI CTAG 2 cut(s) 104, 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.