Prupe.4G163300_v2.0.a1

Amino acid permease

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
9409658 .. 9411078
1421 bp
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UTR
Exon/CDS
Intron
Prupe.4G163300.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 321 bp
ATGCCATGTAAACAGCAACCCTTATATGATGGCTTTTGGCATGGCAAATTATCTTCTCTAATATTCCAAACTTTCAGTTATGGTGGCTCTCCGTTGTTGCTGCAGTCATGTCCTTCACTTTACTCCTCAATTGCCAAAGTTGCAGAAATTGGAAGTATCAAGGGAAGTATGACTTGGATATGCATTGGAACTGTGACACAAATCCAAAAGATTTGTAGGAGCTTCCAAGCGCTTGGTGACAAACCTTTTGCCTACTCTTACTCTCTGAAACTCAGAGCTGGTGCTTTCTTAGCTCTAGGATATGAATACCATTATTATTAA

Protein Analysis

107

Amino Acids

11.84

Weight (kDa)

9.1

Isoelectric Point (pI)

47.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029034)

Species Orthologous Gene IDs
prunus_persica Prupe.4G163300_v2.0.a1 Prupe.I002700_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfeI AGCGCT 1 cut(s) 231
AjuI GAANNNNNNNTTGG 2 cut(s) 157, 189
AluBI AGCT 3 cut(s) 222, 278, 293
AluI AGCT 3 cut(s) 222, 278, 293
Aor51HI AGCGCT 1 cut(s) 231
ApeKI GCWGC 1 cut(s) 100
ArsI GACNNNNNNTTYG 2 cut(s) 230, 262
AspLEI GCGC 1 cut(s) 232
AsuHPI GGTGA 1 cut(s) 248
BbvI GCAGC 1 cut(s) 87
BccI CCATC 1 cut(s) 23
BfaI CTAG 1 cut(s) 296
BfmI CTRYAG 1 cut(s) 101
BfoI RGCGCY 1 cut(s) 233
BisI GCNGC 1 cut(s) 101
BlsI GCNGC 1 cut(s) 102
BseMII CTCAG 1 cut(s) 286
BseRI GAGGAG 1 cut(s) 115
BseXI GCAGC 1 cut(s) 87
BspCNI CTCAG 1 cut(s) 285
BspMAI CTGCAG 1 cut(s) 105
Bst4CI ACNGT 1 cut(s) 193
BstDEI CTNAG 2 cut(s) 272, 289
BstH2I RGCGCY 1 cut(s) 233
BstHHI GCGC 1 cut(s) 232
BstMWI GCNNNNNNNGC 2 cut(s) 140, 290
BstSFI CTRYAG 1 cut(s) 101
BstV1I GCAGC 1 cut(s) 87
BstXI CCANNNNNNTGG 1 cut(s) 233
CfoI GCGC 1 cut(s) 232
CviAII CATG 3 cut(s) 6, 41, 108
CviJI RGCY 5 cut(s) 33, 87, 222, 278, 293
CviKI_1 RGCY 5 cut(s) 33, 87, 222, 278, 293
DdeI CTNAG 2 cut(s) 272, 289
Eco47III AGCGCT 1 cut(s) 231
EcoT22I ATGCAT 1 cut(s) 185
FaeI CATG 3 cut(s) 9, 44, 111
FaiI YATR 9 cut(s) 7, 25, 27, 42, 81, 109, 170, 181, 303
FalI AAGNNNNNCTT 2 cut(s) 157, 189
FatI CATG 3 cut(s) 5, 40, 107
Fnu4HI GCNGC 1 cut(s) 101
Fsp4HI GCNGC 1 cut(s) 101
FspBI CTAG 1 cut(s) 296
GlaI GCGC 1 cut(s) 231
GluI GCNGC 1 cut(s) 101
HaeII RGCGCY 1 cut(s) 233
HhaI GCGC 1 cut(s) 232
Hin1II CATG 3 cut(s) 9, 44, 111
Hin6I GCGC 1 cut(s) 230
HinP1I GCGC 1 cut(s) 230
HphI GGTGA 1 cut(s) 248
Hpy166II GTNNAC 1 cut(s) 11
Hpy188I TCNGA 2 cut(s) 267, 275
Hpy8I GTNNAC 1 cut(s) 11
HpyAV CCTTC 1 cut(s) 123
HpyCH4III ACNGT 1 cut(s) 193
HpyCH4V TGCA 3 cut(s) 103, 143, 183
HpyF10VI GCNNNNNNNGC 2 cut(s) 140, 290
HpyF3I CTNAG 2 cut(s) 272, 289
Hsp92II CATG 3 cut(s) 9, 44, 111
HspAI GCGC 1 cut(s) 230
LmnI GCTCC 1 cut(s) 219
LpnPI CCDG 1 cut(s) 264
Lsp1109I GCAGC 1 cut(s) 87
MaeI CTAG 1 cut(s) 296
MaeIII GTNAC 2 cut(s) 193, 236
MboII GAAGA 1 cut(s) 45
MfeI CAATTG 1 cut(s) 129
MluCI AATT 3 cut(s) 47, 129, 147
MnlI CCTC 1 cut(s) 136
Mph1103I ATGCAT 1 cut(s) 185
MseI TTAA 1 cut(s) 319
MunI CAATTG 1 cut(s) 129
MwoI GCNNNNNNNGC 2 cut(s) 140, 290
NlaIII CATG 3 cut(s) 9, 44, 111
NmuCI GTSAC 2 cut(s) 193, 236
NsiI ATGCAT 1 cut(s) 185
PkrI GCNGC 1 cut(s) 102
PstI CTGCAG 1 cut(s) 105
SaqAI TTAA 1 cut(s) 319
SatI GCNGC 1 cut(s) 101
SetI ASST 4 cut(s) 224, 247, 280, 295
SfcI CTRYAG 1 cut(s) 101
SgeI CNNG 9 cut(s) 18, 53, 120, 172, 186, 239, 245, 291, 308
Sse9I AATT 3 cut(s) 47, 129, 147
SspI AATATT 1 cut(s) 63
SspMI CTAG 1 cut(s) 296
TaaI ACNGT 1 cut(s) 193
TasI AATT 3 cut(s) 47, 129, 147
Tru1I TTAA 1 cut(s) 319
Tru9I TTAA 1 cut(s) 319
TseFI GTSAC 2 cut(s) 193, 236
TseI GCWGC 1 cut(s) 100
Tsp45I GTSAC 2 cut(s) 193, 236
TspDTI ATGAA 1 cut(s) 318
TspGWI ACGGA 1 cut(s) 81
XspI CTAG 1 cut(s) 296
Zsp2I ATGCAT 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.