Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

10276520 .. 10277987

Gene Structure 1468 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G173700.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 960 bp

ATGACAATAATTGATAATCGAACCTCCCACAGAGTTTCATTCGACCTAATAAATGACAAGAATGATTTCAGTAATTTATCCAGCAACCCCCCTCCCAATTCTCCGAGATATAAAAGCATAGGGAACACACACATGCATACAAGAGCTAGCACAAAAGTTGATCAAATGGCGCAACCTAATCTCAATGAGACGAGCTCATCAAATTTTCACATAGCCATGTTCCCATGGTTTGCAATAGGACACGCCATCCCTTTCCTTCACCTCTCCAACGAGCTCGCAGCAAGAGGCCATAAAATCTCTTTCTTGCTGCCTAAAAAAGCTCAGATTCAGATTCAACATCTCAACCTCCACCCACAACTCATCGCCTTTTGTTCAGTCACTGTTCCTCACATTGAAGGCCTCCCTGAGGGCACTGAGACTGCCTCTGACATCCCAACATCTTCGACCGCCTTGCTAGCGACTGCCATGGACCGCACCCGTCAGCAAATAGAAGGCTTCCTAGTAAGTTGTGGTGCCAATGATCGTAAAATCGATATGATTTTCTATGACTTTGCTCATTGGGTACCAGAAATTACAAGAGGGCTTGGAATTAAGTGCATTAACTATGGCGTTCTTTGTGCTGCGACAACTGCGATGGCTATTGTGCCAGCACGAAATGTGCCCAAAGATAGGCCTGTGACTGAGGAAGATCTACGGGACCCACCTCCTGGGTACCCGTCATCAACTGTGGTAATGCTTCCTGGTCGCGAAGTCCAGTCTTTGATGTTCATTACGATGCCGTATGGAGATGGGATCACTTTTTATGAGCGGCTCATGACCTCTAAGAAAGGATGTGACGCGTTATCCACGTGCTCAAGTGTCACACAAAGTAAAGGAAATAGATTCTCTCCTAGACTTGGATTTACAAACAAAGAAAGTTCACAACTATTAACCAAGGTATGCAAGAATCTCACAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009718 GO:0009719 GO:0009725 GO:0009735 GO:0009753 GO:0009812 GO:0009813 GO:0009987 GO:0010033 GO:0016137 GO:0016740 GO:0016757 GO:0016758 GO:0016763 GO:0032870 GO:0035251 GO:0035252 GO:0042221 GO:0042285 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046148 GO:0046283 GO:0046527 GO:0050896 GO:0051716 GO:0070887 GO:0071229 GO:0071310 GO:0071368 GO:0071395 GO:0071495 GO:0071704 GO:0080043 GO:0080044 GO:1901038 GO:1901135 GO:1901576 GO:1901657 GO:1901700 GO:1901701 GO:1901804

KEGG Pathways

Metabolic & Signaling

ko00942 map00942

Pfam Domains

Protein Families

UDPGT

Protein Analysis

320

Amino Acids

35.29

Weight (kDa)

8.65

Isoelectric Point (pI)

43.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	562, 711
AccB1I	GGYRCC	3 cut(s)	512, 562, 711
AccB7I	CCANNNNNTGG	1 cut(s)	707
AccBSI	CCGCTC	1 cut(s)	808
AccII	CGCG	2 cut(s)	747, 839
AciI	CCGC	3 cut(s)	447, 472, 808
AclWI	GGATC	1 cut(s)	800
AcsI	RAATTY	1 cut(s)	202
AcvI	CACGTG	1 cut(s)	849
AfaI	GTAC	2 cut(s)	564, 713
AfiI	CCNNNNNNNGG	4 cut(s)	406, 669, 707, 896
AflIII	ACRYGT	1 cut(s)	837
AgsI	TTSAA	2 cut(s)	335, 395
AjnI	CCWGG	2 cut(s)	706, 739
AluBI	AGCT	4 cut(s)	146, 195, 274, 320
AluI	AGCT	4 cut(s)	146, 195, 274, 320
Alw21I	GWGCWC	3 cut(s)	197, 276, 854
Alw26I	GTCTC	2 cut(s)	182, 410
AlwI	GGATC	1 cut(s)	800
AlwNI	CAGNNNCTG	1 cut(s)	380
AoxI	GGCC	3 cut(s)	286, 397, 671
ApeKI	GCWGC	3 cut(s)	278, 307, 620
ApoI	RAATTY	1 cut(s)	202
Asp700I	GAANNNNTTC	1 cut(s)	65
Asp718I	GGTACC	2 cut(s)	562, 711
AspLEI	GCGC	1 cut(s)	172
AspS9I	GGNCC	2 cut(s)	469, 697
AsuHPI	GGTGA	1 cut(s)	251
AsuNHI	GCTAGC	2 cut(s)	146, 454
AvaII	GGWCC	2 cut(s)	469, 697
AxyI	CCTNAGG	1 cut(s)	405
BaeGI	GKGCMC	2 cut(s)	413, 663
BanI	GGYRCC	3 cut(s)	512, 562, 711
BanII	GRGCYC	2 cut(s)	197, 276
BbrPI	CACGTG	1 cut(s)	849
Bbv12I	GWGCWC	3 cut(s)	197, 276, 854
BbvI	GCAGC	3 cut(s)	290, 294, 607
BccI	CCATC	3 cut(s)	254, 628, 782
BceAI	ACGGC	1 cut(s)	763
BcgI	CGANNNNNNTGC	2 cut(s)	433, 467
BciT130I	CCWGG	2 cut(s)	708, 741
BclI	TGATCA	1 cut(s)	160
BcoDI	GTCTC	2 cut(s)	182, 410
BfaI	CTAG	4 cut(s)	147, 455, 500, 891
BglII	AGATCT	1 cut(s)	688
BisI	GCNGC	4 cut(s)	279, 308, 621, 809
BlsI	GCNGC	4 cut(s)	280, 309, 622, 810
Bme1390I	CCNGG	2 cut(s)	708, 741
Bme18I	GGWCC	2 cut(s)	469, 697
BmgT120I	GGNCC	2 cut(s)	469, 697
BmiI	GGNNCC	5 cut(s)	514, 564, 698, 699, 713
BmrFI	CCNGG	2 cut(s)	708, 741
BmsI	GCATC	1 cut(s)	765
BmtI	GCTAGC	2 cut(s)	150, 458
BplI	GAGNNNNNCTC	4 cut(s)	179, 211, 407, 439
BpuEI	CTTGAG	1 cut(s)	838
Bsa29I	ATCGAT	1 cut(s)	531
BsaAI	YACGTR	1 cut(s)	849
BsaJI	CCNNGG	4 cut(s)	224, 465, 707, 933
Bsc4I	CCNNNNNNNGG	4 cut(s)	406, 669, 707, 896
Bse1I	ACTGG	1 cut(s)	754
Bse21I	CCTNAGG	1 cut(s)	405
BseBI	CCWGG	2 cut(s)	708, 741
BseCI	ATCGAT	1 cut(s)	531
BseDI	CCNNGG	4 cut(s)	224, 465, 707, 933
BseGI	GGATG	3 cut(s)	246, 429, 836
BseLI	CCNNNNNNNGG	4 cut(s)	406, 669, 707, 896
BseMII	CTCAG	4 cut(s)	335, 396, 405, 672
BseNI	ACTGG	1 cut(s)	754
BseSI	GKGCMC	2 cut(s)	413, 663
BseXI	GCAGC	3 cut(s)	290, 294, 607
Bsh1236I	CGCG	2 cut(s)	747, 839
Bsh1285I	CGRYCG	1 cut(s)	447
BshFI	GGCC	3 cut(s)	288, 399, 673
BshNI	GGYRCC	3 cut(s)	512, 562, 711
BshVI	ATCGAT	1 cut(s)	531
BsiEI	CGRYCG	1 cut(s)	447
BsiHKAI	GWGCWC	3 cut(s)	197, 276, 854
BslFI	GGGAC	1 cut(s)	710
BslI	CCNNNNNNNGG	4 cut(s)	406, 669, 707, 896
BsmAI	GTCTC	2 cut(s)	182, 410
BsmBI	CGTCTC	1 cut(s)	182
BsmFI	GGGAC	1 cut(s)	710
BsnI	GGCC	3 cut(s)	288, 399, 673
Bsp1286I	GDGCHC	5 cut(s)	197, 276, 413, 663, 854
Bsp143I	GATC	4 cut(s)	160, 520, 688, 792
Bsp19I	CCATGG	2 cut(s)	224, 465
Bsp68I	TCGCGA	1 cut(s)	747
BspACI	CCGC	3 cut(s)	447, 472, 808
BspANI	GGCC	3 cut(s)	288, 399, 673
BspCNI	CTCAG	4 cut(s)	334, 397, 406, 673
BspDI	ATCGAT	1 cut(s)	531
BspFNI	CGCG	2 cut(s)	747, 839
BspHI	TCATGA	1 cut(s)	813
BspLI	GGNNCC	5 cut(s)	514, 564, 698, 699, 713
BspOI	GCTAGC	2 cut(s)	150, 458
BspPI	GGATC	1 cut(s)	800
BspT107I	GGYRCC	3 cut(s)	512, 562, 711
BsrBI	CCGCTC	1 cut(s)	808
BsrI	ACTGG	1 cut(s)	754
BssECI	CCNNGG	4 cut(s)	224, 465, 707, 933
BssMI	GATC	4 cut(s)	160, 520, 688, 792
BssT1I	CCWWGG	3 cut(s)	224, 465, 933
Bst2UI	CCWGG	2 cut(s)	708, 741
Bst4CI	ACNGT	2 cut(s)	382, 727
BstBAI	YACGTR	1 cut(s)	849
BstC8I	GCNNGC	4 cut(s)	148, 276, 456, 648
BstDEI	CTNAG	5 cut(s)	321, 405, 414, 681, 822
BstDSI	CCRYGG	2 cut(s)	224, 465
BstENI	CCTNNNNNAGG	1 cut(s)	404
BstF5I	GGATG	3 cut(s)	246, 429, 836
BstFNI	CGCG	2 cut(s)	747, 839
BstHHI	GCGC	1 cut(s)	172
BstKTI	GATC	4 cut(s)	163, 523, 691, 795
BstMAI	GTCTC	2 cut(s)	182, 410
BstMBI	GATC	4 cut(s)	160, 520, 688, 792
BstMCI	CGRYCG	1 cut(s)	447
BstMWI	GCNNNNNNNGC	2 cut(s)	455, 629
BstNI	CCWGG	2 cut(s)	708, 741
BstNSI	RCATGY	1 cut(s)	136
BstSCI	CCNGG	2 cut(s)	706, 739
BstSLI	GKGCMC	2 cut(s)	413, 663
BstUI	CGCG	2 cut(s)	747, 839
BstV1I	GCAGC	3 cut(s)	290, 294, 607
BstX2I	RGATCY	1 cut(s)	688
BstYI	RGATCY	1 cut(s)	688
Bsu15I	ATCGAT	1 cut(s)	531
Bsu36I	CCTNAGG	1 cut(s)	405
BsuRI	GGCC	3 cut(s)	288, 399, 673
BsuTUI	ATCGAT	1 cut(s)	531
BtgI	CCRYGG	2 cut(s)	224, 465
BtgZI	GCGATG	2 cut(s)	346, 647
BtsCI	GGATG	3 cut(s)	246, 429, 836
BtsIMutI	CAGTG	2 cut(s)	378, 411
BtuMI	TCGCGA	1 cut(s)	747
Cac8I	GCNNGC	4 cut(s)	148, 276, 456, 648
CaiI	CAGNNNCTG	1 cut(s)	380
CciI	TCATGA	1 cut(s)	813
CfoI	GCGC	1 cut(s)	172
Cfr13I	GGNCC	2 cut(s)	469, 697
ClaI	ATCGAT	1 cut(s)	531
CseI	GACGC	1 cut(s)	845
Csp6I	GTAC	2 cut(s)	563, 712
CviAII	CATG	5 cut(s)	133, 217, 225, 466, 814
CviQI	GTAC	2 cut(s)	563, 712
DdeI	CTNAG	5 cut(s)	321, 405, 414, 681, 822
DpnI	GATC	4 cut(s)	162, 522, 690, 794
DpnII	GATC	4 cut(s)	160, 520, 688, 792
Ecl136II	GAGCTC	2 cut(s)	195, 274
Eco130I	CCWWGG	3 cut(s)	224, 465, 933
Eco147I	AGGCCT	2 cut(s)	399, 673
Eco24I	GRGCYC	2 cut(s)	197, 276
Eco47I	GGWCC	2 cut(s)	469, 697
Eco53kI	GAGCTC	2 cut(s)	195, 274
Eco72I	CACGTG	1 cut(s)	849
Eco81I	CCTNAGG	1 cut(s)	405
EcoICRI	GAGCTC	2 cut(s)	195, 274
EcoNI	CCTNNNNNAGG	1 cut(s)	404
EcoO109I	RGGNCCY	1 cut(s)	697
EcoRII	CCWGG	2 cut(s)	706, 739
EcoT14I	CCWWGG	3 cut(s)	224, 465, 933
EcoT22I	ATGCAT	1 cut(s)	138
EcoT38I	GRGCYC	2 cut(s)	197, 276
ErhI	CCWWGG	3 cut(s)	224, 465, 933
Esp3I	CGTCTC	1 cut(s)	182
FaeI	CATG	5 cut(s)	136, 220, 228, 469, 817
FaqI	GGGAC	1 cut(s)	710
FatI	CATG	5 cut(s)	132, 216, 224, 465, 813
FbaI	TGATCA	1 cut(s)	160
Fnu4HI	GCNGC	4 cut(s)	279, 308, 621, 809
FokI	GGATG	3 cut(s)	233, 416, 843
FriOI	GRGCYC	2 cut(s)	197, 276
Fsp4HI	GCNGC	4 cut(s)	279, 308, 621, 809
FspBI	CTAG	4 cut(s)	147, 455, 500, 891
GlaI	GCGC	1 cut(s)	171
GluI	GCNGC	4 cut(s)	279, 308, 621, 809
HaeIII	GGCC	3 cut(s)	288, 399, 673
HgaI	GACGC	1 cut(s)	845
HhaI	GCGC	1 cut(s)	172
Hin1II	CATG	5 cut(s)	136, 220, 228, 469, 817
Hin6I	GCGC	1 cut(s)	170
HinP1I	GCGC	1 cut(s)	170
HinfI	GANTC	4 cut(s)	325, 331, 882, 946
HphI	GGTGA	1 cut(s)	251
Hpy166II	GTNNAC	1 cut(s)	920
Hpy188I	TCNGA	4 cut(s)	105, 324, 330, 427
Hpy188III	TCNNGA	2 cut(s)	746, 814
Hpy8I	GTNNAC	1 cut(s)	920
HpyAV	CCTTC	3 cut(s)	266, 389, 485
HpyCH4III	ACNGT	2 cut(s)	382, 727
HpyCH4IV	ACGT	1 cut(s)	848
HpyCH4V	TGCA	4 cut(s)	136, 233, 597, 942
HpyF10VI	GCNNNNNNNGC	2 cut(s)	455, 629
HpyF3I	CTNAG	5 cut(s)	321, 405, 414, 681, 822
HpySE526I	ACGT	1 cut(s)	848
Hsp92II	CATG	5 cut(s)	136, 220, 228, 469, 817
HspAI	GCGC	1 cut(s)	170
KflI	GGGWCCC	1 cut(s)	697
KpnI	GGTACC	2 cut(s)	566, 715
Ksp22I	TGATCA	1 cut(s)	160
Kzo9I	GATC	4 cut(s)	160, 520, 688, 792
Lsp1109I	GCAGC	3 cut(s)	290, 294, 607
LweI	GCATC	1 cut(s)	765
MaeI	CTAG	4 cut(s)	147, 455, 500, 891
MaeII	ACGT	1 cut(s)	848
MaeIII	GTNAC	4 cut(s)	376, 676, 833, 859
MalI	GATC	4 cut(s)	162, 522, 690, 794
MbiI	CCGCTC	1 cut(s)	808
MboI	GATC	4 cut(s)	160, 520, 688, 792
MboII	GAAGA	2 cut(s)	432, 698
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	5 cut(s)	197, 276, 413, 663, 854
MluCI	AATT	7 cut(s)	9, 73, 97, 202, 570, 588, 954
MluI	ACGCGT	1 cut(s)	837
MmeI	TCCRAC	1 cut(s)	291
Mph1103I	ATGCAT	1 cut(s)	138
MroXI	GAANNNNTTC	1 cut(s)	65
MseI	TTAA	4 cut(s)	591, 600, 929, 958
MslI	CAYNNNNRTG	3 cut(s)	131, 215, 773
MspR9I	CCNGG	2 cut(s)	708, 741
MvaI	CCWGG	2 cut(s)	708, 741
MvnI	CGCG	2 cut(s)	747, 839
MwoI	GCNNNNNNNGC	2 cut(s)	455, 629
NcoI	CCATGG	2 cut(s)	224, 465
NdeII	GATC	4 cut(s)	160, 520, 688, 792
NheI	GCTAGC	2 cut(s)	146, 454
NlaIII	CATG	5 cut(s)	136, 220, 228, 469, 817
NlaIV	GGNNCC	5 cut(s)	514, 564, 698, 699, 713
NmuCI	GTSAC	4 cut(s)	376, 676, 833, 859
NruI	TCGCGA	1 cut(s)	747
NsiI	ATGCAT	1 cut(s)	138
NspI	RCATGY	1 cut(s)	136
PagI	TCATGA	1 cut(s)	813
PceI	AGGCCT	2 cut(s)	399, 673
PdmI	GAANNNNTTC	1 cut(s)	65
PfeI	GAWTC	4 cut(s)	325, 331, 882, 946
PflMI	CCANNNNNTGG	1 cut(s)	707
PkrI	GCNGC	4 cut(s)	280, 309, 622, 810
PmaCI	CACGTG	1 cut(s)	849
PmlI	CACGTG	1 cut(s)	849
Ppu21I	YACGTR	1 cut(s)	849
PpuMI	RGGWCCY	1 cut(s)	697
Psp124BI	GAGCTC	2 cut(s)	197, 276
Psp5II	RGGWCCY	1 cut(s)	697
Psp6I	CCWGG	2 cut(s)	706, 739
PspCI	CACGTG	1 cut(s)	849
PspGI	CCWGG	2 cut(s)	706, 739
PspN4I	GGNNCC	5 cut(s)	514, 564, 698, 699, 713
PspPI	GGNCC	2 cut(s)	469, 697
PspPPI	RGGWCCY	1 cut(s)	697
PstNI	CAGNNNCTG	1 cut(s)	380
PsuI	RGATCY	1 cut(s)	688
RruI	TCGCGA	1 cut(s)	747
RsaI	GTAC	2 cut(s)	564, 713
RsaNI	GTAC	2 cut(s)	563, 712
RseI	CAYNNNNRTG	3 cut(s)	131, 215, 773
SacI	GAGCTC	2 cut(s)	197, 276
SaqAI	TTAA	4 cut(s)	591, 600, 929, 958
SatI	GCNGC	4 cut(s)	279, 308, 621, 809
Sau3AI	GATC	4 cut(s)	160, 520, 688, 792
Sau96I	GGNCC	2 cut(s)	469, 697
ScrFI	CCNGG	2 cut(s)	708, 741
SduI	GDGCHC	5 cut(s)	197, 276, 413, 663, 854
SfaNI	GCATC	1 cut(s)	765
SinI	GGWCC	2 cut(s)	469, 697
SmiMI	CAYNNNNRTG	3 cut(s)	131, 215, 773
SmlI	CTYRAG	1 cut(s)	853
SmoI	CTYRAG	1 cut(s)	853
Sse9I	AATT	7 cut(s)	9, 73, 97, 202, 570, 588, 954
SseBI	AGGCCT	2 cut(s)	399, 673
SsiI	CCGC	3 cut(s)	447, 472, 808
SspMI	CTAG	4 cut(s)	147, 455, 500, 891
SstI	GAGCTC	2 cut(s)	197, 276
StuI	AGGCCT	2 cut(s)	399, 673
StyD4I	CCNGG	2 cut(s)	706, 739
StyI	CCWWGG	3 cut(s)	224, 465, 933
TaaI	ACNGT	2 cut(s)	382, 727
TaiI	ACGT	1 cut(s)	851
TaqI	TCGA	4 cut(s)	19, 42, 443, 531
TasI	AATT	7 cut(s)	9, 73, 97, 202, 570, 588, 954
TauI	GCSGC	1 cut(s)	811
TfiI	GAWTC	4 cut(s)	325, 331, 882, 946
Tru1I	TTAA	4 cut(s)	591, 600, 929, 958
Tru9I	TTAA	4 cut(s)	591, 600, 929, 958
TscAI	CASTG	2 cut(s)	385, 418
TseFI	GTSAC	4 cut(s)	376, 676, 833, 859
TseI	GCWGC	3 cut(s)	278, 307, 620
Tsp45I	GTSAC	4 cut(s)	376, 676, 833, 859
TspDTI	ATGAA	2 cut(s)	27, 757
TspRI	CASTG	2 cut(s)	385, 418
Van91I	CCANNNNNTGG	1 cut(s)	707
VpaK11BI	GGWCC	2 cut(s)	469, 697
XagI	CCTNNNNNAGG	1 cut(s)	404
XapI	RAATTY	1 cut(s)	202
XceI	RCATGY	1 cut(s)	136
XmnI	GAANNNNTTC	1 cut(s)	65
XspI	CTAG	4 cut(s)	147, 455, 500, 891
Zsp2I	ATGCAT	1 cut(s)	138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.