Prupe.4G179200_v2.0.a1

purine permease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Forward (+)
10621898 .. 10622773
876 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G179200.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 684 bp
ATGTCGAGATTATCAATCTCATATAAGTTGCAGTTAACAGAACTGATCCTTGCATTATTACCATTCTTATCAGTTCATATCAGGAACCAAATGGAGCAAACTCCCAAAGCCTTCCCAGTCTGTCTCTCTTGCCCTCCTAGACTATCTTACCTTCATGTGTCCACATGTTCCCTCATCTGCGCATTCCAGTTGGCCTTCAATGCGCTTTTCTCCTTCATCCTCAACTCACAGAAGTTCACTCCTTACGTTTCAACGCTCTCGTCCTGCTCACCATCTCCTCTGTCCTCATTGTGTTTCAAGGCAACTCCGACTCTGCAGACGCAGCCGGAAAAGGTTATAAGAAAGGAAACGTTTACAGCAGTCATGGACGTGATAGTCTGTCAGGTTGCAAGCTTTGCTATCTTGGTAGGACGTTTGGTCAGTGGAGAGTGGAAGGTGTGGTTGCTGTTTGCTATTTGCGGAGTAGGGTTGATTTTTGAGGCATCTTCCCTCTTCTCCAATGTCGTAGGTACTTTAGGTTTGCCTGTGGTTCCAGTTCTACCTGTGATCTTCTTCCATGACAAAATGGACCGAATTAAGGTAGTGGCCATGGTTCTGGCCATTTGGGGCTTTGTTTATCTTTATCAGCACTACCTGGACGATCATATGACAGCTGAGAATGAGAATGCCATATGCGAACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PUNUT

Protein Analysis

228

Amino Acids

25.36

Weight (kDa)

8.07

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 338
AasI GACNNNNNNGTC 1 cut(s) 374
Acc16I TGCGCA 1 cut(s) 181
AciI CCGC 1 cut(s) 459
AclI AACGTT 1 cut(s) 350
AclWI GGATC 1 cut(s) 40
AcoI YGGCCR 2 cut(s) 585, 597
AfaI GTAC 1 cut(s) 511
AfiI CCNNNNNNNGG 1 cut(s) 577
AflIII ACRYGT 1 cut(s) 164
AgsI TTSAA 3 cut(s) 199, 252, 298
AhdI GACNNNNNGTC 1 cut(s) 416
AjiI CACGTC 1 cut(s) 370
AjnI CCWGG 1 cut(s) 633
AluBI AGCT 2 cut(s) 393, 653
AluI AGCT 2 cut(s) 393, 653
Alw26I GTCTC 1 cut(s) 128
AlwI GGATC 1 cut(s) 40
AoxI GGCC 3 cut(s) 192, 585, 597
ApeKI GCWGC 1 cut(s) 322
AspLEI GCGC 2 cut(s) 182, 205
AspS9I GGNCC 1 cut(s) 568
AsuHPI GGTGA 1 cut(s) 261
AvaII GGWCC 1 cut(s) 568
BalI TGGCCA 2 cut(s) 587, 599
BbvI GCAGC 1 cut(s) 334
BccI CCATC 1 cut(s) 280
BciT130I CCWGG 1 cut(s) 635
BcoDI GTCTC 1 cut(s) 128
BfaI CTAG 1 cut(s) 138
BfmI CTRYAG 1 cut(s) 314
BisI GCNGC 1 cut(s) 323
BlsI GCNGC 1 cut(s) 324
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 1 cut(s) 568
BmeRI GACNNNNNGTC 1 cut(s) 416
BmgBI CACGTC 1 cut(s) 370
BmgT120I GGNCC 1 cut(s) 568
BmiI GGNNCC 2 cut(s) 86, 531
BmrFI CCNGG 1 cut(s) 635
BmrI ACTGGG 1 cut(s) 110
BmsI GCATC 1 cut(s) 491
BmuI ACTGGG 1 cut(s) 110
BsaJI CCNNGG 1 cut(s) 588
Bsc4I CCNNNNNNNGG 1 cut(s) 577
Bse1I ACTGG 3 cut(s) 116, 187, 533
BseBI CCWGG 1 cut(s) 635
BseDI CCNNGG 1 cut(s) 588
BseGI GGATG 1 cut(s) 216
BseLI CCNNNNNNNGG 1 cut(s) 577
BseMII CTCAG 1 cut(s) 645
BseNI ACTGG 3 cut(s) 116, 187, 533
BseRI GAGGAG 1 cut(s) 267
BseXI GCAGC 1 cut(s) 334
BshFI GGCC 3 cut(s) 194, 587, 599
BsiSI CCGG 1 cut(s) 326
BslI CCNNNNNNNGG 1 cut(s) 577
BsmAI GTCTC 1 cut(s) 128
BsmI GAATGC 2 cut(s) 182, 670
BsnI GGCC 3 cut(s) 194, 587, 599
Bsp143I GATC 3 cut(s) 45, 546, 640
Bsp19I CCATGG 1 cut(s) 588
BspACI CCGC 1 cut(s) 459
BspANI GGCC 3 cut(s) 194, 587, 599
BspCNI CTCAG 1 cut(s) 646
BspLI GGNNCC 2 cut(s) 86, 531
BspMAI CTGCAG 1 cut(s) 318
BspPI GGATC 1 cut(s) 40
BsrI ACTGG 3 cut(s) 116, 187, 533
BssECI CCNNGG 1 cut(s) 588
BssMI GATC 3 cut(s) 45, 546, 640
BssT1I CCWWGG 1 cut(s) 588
Bst2UI CCWGG 1 cut(s) 635
Bst6I CTCTTC 1 cut(s) 497
BstAPI GCANNNNNTGC 1 cut(s) 395
BstC8I GCNNGC 1 cut(s) 391
BstDEI CTNAG 1 cut(s) 654
BstDSI CCRYGG 1 cut(s) 588
BstF5I GGATG 1 cut(s) 216
BstHHI GCGC 2 cut(s) 182, 205
BstKTI GATC 3 cut(s) 48, 549, 643
BstMAI GTCTC 1 cut(s) 128
BstMBI GATC 3 cut(s) 45, 546, 640
BstMWI GCNNNNNNNGC 3 cut(s) 200, 322, 395
BstNI CCWGG 1 cut(s) 635
BstNSI RCATGY 1 cut(s) 168
BstSCI CCNGG 1 cut(s) 633
BstSFI CTRYAG 1 cut(s) 314
BstV1I GCAGC 1 cut(s) 334
BstXI CCANNNNNNTGG 1 cut(s) 595
BsuRI GGCC 3 cut(s) 194, 587, 599
BtgI CCRYGG 1 cut(s) 588
BtrI CACGTC 1 cut(s) 370
BtsCI GGATG 1 cut(s) 216
BtsIMutI CAGTG 1 cut(s) 427
Cac8I GCNNGC 1 cut(s) 391
CfoI GCGC 2 cut(s) 182, 205
Cfr13I GGNCC 1 cut(s) 568
CseI GACGC 1 cut(s) 328
Csp6I GTAC 1 cut(s) 510
CviAII CATG 5 cut(s) 155, 165, 364, 557, 589
CviJI RGCY 8 cut(s) 110, 194, 325, 393, 587, 599, 609, 653
CviKI_1 RGCY 8 cut(s) 110, 194, 325, 393, 587, 599, 609, 653
CviQI GTAC 1 cut(s) 510
DdeI CTNAG 1 cut(s) 654
DpnI GATC 3 cut(s) 47, 548, 642
DpnII GATC 3 cut(s) 45, 546, 640
DrdI GACNNNNNNGTC 1 cut(s) 374
DriI GACNNNNNGTC 1 cut(s) 416
DseDI GACNNNNNNGTC 1 cut(s) 374
EaeI YGGCCR 2 cut(s) 585, 597
Eam1104I CTCTTC 1 cut(s) 497
Eam1105I GACNNNNNGTC 1 cut(s) 416
EarI CTCTTC 1 cut(s) 497
Eco130I CCWWGG 1 cut(s) 588
Eco47I GGWCC 1 cut(s) 568
EcoRII CCWGG 1 cut(s) 633
EcoT14I CCWWGG 1 cut(s) 588
ErhI CCWWGG 1 cut(s) 588
FaeI CATG 5 cut(s) 158, 168, 367, 560, 592
FatI CATG 5 cut(s) 154, 164, 363, 556, 588
FauNDI CATATG 2 cut(s) 645, 671
Fnu4HI GCNGC 1 cut(s) 323
FokI GGATG 1 cut(s) 203
Fsp4HI GCNGC 1 cut(s) 323
FspBI CTAG 1 cut(s) 138
FspI TGCGCA 1 cut(s) 181
GlaI GCGC 2 cut(s) 181, 204
GluI GCNGC 1 cut(s) 323
HaeIII GGCC 3 cut(s) 194, 587, 599
HapII CCGG 1 cut(s) 326
HgaI GACGC 1 cut(s) 328
HhaI GCGC 2 cut(s) 182, 205
Hin1II CATG 5 cut(s) 158, 168, 367, 560, 592
Hin6I GCGC 2 cut(s) 180, 203
HinP1I GCGC 2 cut(s) 180, 203
HincII GTYRAC 1 cut(s) 36
HindII GTYRAC 1 cut(s) 36
HindIII AAGCTT 1 cut(s) 391
HinfI GANTC 1 cut(s) 310
HpaI GTTAAC 1 cut(s) 36
HpaII CCGG 1 cut(s) 326
HphI GGTGA 1 cut(s) 261
Hpy166II GTNNAC 4 cut(s) 36, 162, 237, 354
Hpy188I TCNGA 1 cut(s) 309
Hpy188III TCNNGA 2 cut(s) 6, 82
Hpy8I GTNNAC 4 cut(s) 36, 162, 237, 354
HpyAV CCTTC 5 cut(s) 121, 161, 205, 223, 427
HpyCH4IV ACGT 4 cut(s) 246, 350, 369, 412
HpyCH4V TGCA 4 cut(s) 31, 53, 316, 389
HpyF10VI GCNNNNNNNGC 3 cut(s) 200, 322, 395
HpyF3I CTNAG 1 cut(s) 654
HpySE526I ACGT 4 cut(s) 246, 350, 369, 412
Hsp92II CATG 5 cut(s) 158, 168, 367, 560, 592
HspAI GCGC 2 cut(s) 180, 203
KspAI GTTAAC 1 cut(s) 36
Kzo9I GATC 3 cut(s) 45, 546, 640
LmnI GCTCC 1 cut(s) 94
Lsp1109I GCAGC 1 cut(s) 334
LweI GCATC 1 cut(s) 491
MaeI CTAG 1 cut(s) 138
MaeII ACGT 4 cut(s) 246, 350, 369, 412
MalI GATC 3 cut(s) 47, 548, 642
MboI GATC 3 cut(s) 45, 546, 640
MboII GAAGA 4 cut(s) 477, 484, 541, 544
MlsI TGGCCA 2 cut(s) 587, 599
MluCI AATT 1 cut(s) 573
MluNI TGGCCA 2 cut(s) 587, 599
MlyI GAGTC 1 cut(s) 304
MmeI TCCRAC 1 cut(s) 332
MnlI CCTC 7 cut(s) 144, 182, 230, 288, 295, 472, 500
Mox20I TGGCCA 2 cut(s) 587, 599
MscI TGGCCA 2 cut(s) 587, 599
MseI TTAA 2 cut(s) 35, 576
MslI CAYNNNNRTG 1 cut(s) 368
Msp20I TGGCCA 2 cut(s) 587, 599
MspA1I CMGCKG 1 cut(s) 653
MspI CCGG 1 cut(s) 326
MspR9I CCNGG 1 cut(s) 635
Mva1269I GAATGC 2 cut(s) 182, 670
MvaI CCWGG 1 cut(s) 635
MwoI GCNNNNNNNGC 3 cut(s) 200, 322, 395
NcoI CCATGG 1 cut(s) 588
NdeI CATATG 2 cut(s) 645, 671
NdeII GATC 3 cut(s) 45, 546, 640
NlaIII CATG 5 cut(s) 158, 168, 367, 560, 592
NlaIV GGNNCC 2 cut(s) 86, 531
NsbI TGCGCA 1 cut(s) 181
NspI RCATGY 1 cut(s) 168
PciI ACATGT 1 cut(s) 164
PctI GAATGC 2 cut(s) 182, 670
PkrI GCNGC 1 cut(s) 324
PleI GAGTC 1 cut(s) 304
PpsI GAGTC 1 cut(s) 304
PscI ACATGT 1 cut(s) 164
PsiI TTATAA 1 cut(s) 338
Psp1406I AACGTT 1 cut(s) 350
Psp6I CCWGG 1 cut(s) 633
PspGI CCWGG 1 cut(s) 633
PspN4I GGNNCC 2 cut(s) 86, 531
PspPI GGNCC 1 cut(s) 568
PstI CTGCAG 1 cut(s) 318
PvuII CAGCTG 1 cut(s) 653
RsaI GTAC 1 cut(s) 511
RsaNI GTAC 1 cut(s) 510
RseI CAYNNNNRTG 1 cut(s) 368
SaqAI TTAA 2 cut(s) 35, 576
SatI GCNGC 1 cut(s) 323
Sau3AI GATC 3 cut(s) 45, 546, 640
Sau96I GGNCC 1 cut(s) 568
SchI GAGTC 1 cut(s) 304
ScrFI CCNGG 1 cut(s) 635
SfaNI GCATC 1 cut(s) 491
SfcI CTRYAG 1 cut(s) 314
SinI GGWCC 1 cut(s) 568
SmiMI CAYNNNNRTG 1 cut(s) 368
Sse9I AATT 1 cut(s) 573
SsiI CCGC 1 cut(s) 459
SspMI CTAG 1 cut(s) 138
StyD4I CCNGG 1 cut(s) 633
StyI CCWWGG 1 cut(s) 588
TaiI ACGT 4 cut(s) 249, 353, 372, 415
TaqI TCGA 1 cut(s) 5
TaqII GACCGA 1 cut(s) 585
TasI AATT 1 cut(s) 573
Tru1I TTAA 2 cut(s) 35, 576
Tru9I TTAA 2 cut(s) 35, 576
TscAI CASTG 1 cut(s) 427
TseI GCWGC 1 cut(s) 322
TspDTI ATGAA 3 cut(s) 65, 143, 205
TspRI CASTG 1 cut(s) 427
VpaK11BI GGWCC 1 cut(s) 568
XceI RCATGY 1 cut(s) 168
XspI CTAG 1 cut(s) 138
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.