Prupe.4G193500_v2.0.a1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Forward (+)
11647022 .. 11647573
552 bp
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UTR
Exon/CDS
Intron
Prupe.4G193500.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 135 bp
ATGATAGCAAATCTTCAACACTGGAATCTTGTTAAACTTTTGGGCTGCTGCATCCAAGGAGAAGAAAGGATGCTGATCTATGAGTACATGCCCAACAAAAGCTTGGACTGCTTTATTTTCGGGGAGGAAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

45

Amino Acids

5.21

Weight (kDa)

4.7

Isoelectric Point (pI)

51.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 86
AgsI TTSAA 1 cut(s) 17
AluBI AGCT 1 cut(s) 102
AluI AGCT 1 cut(s) 102
ApeKI GCWGC 2 cut(s) 45, 48
BbvI GCAGC 2 cut(s) 32, 35
BisI GCNGC 2 cut(s) 46, 49
BlsI GCNGC 2 cut(s) 47, 50
BmsI GCATC 2 cut(s) 60, 60
BsaBI GATNNNNATC 1 cut(s) 74
BsaJI CCNNGG 1 cut(s) 55
Bse1I ACTGG 1 cut(s) 26
Bse8I GATNNNNATC 1 cut(s) 74
BseDI CCNNGG 1 cut(s) 55
BseGI GGATG 2 cut(s) 51, 75
BseJI GATNNNNATC 1 cut(s) 74
BseNI ACTGG 1 cut(s) 26
BseXI GCAGC 2 cut(s) 32, 35
Bsp143I GATC 1 cut(s) 75
BsrI ACTGG 1 cut(s) 26
BssECI CCNNGG 1 cut(s) 55
BssMI GATC 1 cut(s) 75
BssT1I CCWWGG 1 cut(s) 55
BstF5I GGATG 2 cut(s) 51, 75
BstKTI GATC 1 cut(s) 78
BstMBI GATC 1 cut(s) 75
BstMWI GCNNNNNNNGC 1 cut(s) 108
BstNSI RCATGY 1 cut(s) 91
BstV1I GCAGC 2 cut(s) 32, 35
BtsCI GGATG 2 cut(s) 51, 75
BtsIMutI CAGTG 1 cut(s) 19
Csp6I GTAC 1 cut(s) 85
CviAII CATG 1 cut(s) 88
CviJI RGCY 2 cut(s) 45, 102
CviKI_1 RGCY 2 cut(s) 45, 102
CviQI GTAC 1 cut(s) 85
DpnI GATC 1 cut(s) 77
DpnII GATC 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 55
EcoT14I CCWWGG 1 cut(s) 55
ErhI CCWWGG 1 cut(s) 55
FaeI CATG 1 cut(s) 91
FaiI YATR 2 cut(s) 81, 89
FatI CATG 1 cut(s) 87
Fnu4HI GCNGC 2 cut(s) 46, 49
FokI GGATG 2 cut(s) 38, 82
Fsp4HI GCNGC 2 cut(s) 46, 49
GluI GCNGC 2 cut(s) 46, 49
Hin1II CATG 1 cut(s) 91
HindIII AAGCTT 1 cut(s) 100
HinfI GANTC 1 cut(s) 25
HpyCH4V TGCA 1 cut(s) 51
HpyF10VI GCNNNNNNNGC 1 cut(s) 108
Hsp92II CATG 1 cut(s) 91
Kzo9I GATC 1 cut(s) 75
LpnPI CCDG 1 cut(s) 7
Lsp1109I GCAGC 2 cut(s) 32, 35
LweI GCATC 2 cut(s) 60, 60
MalI GATC 1 cut(s) 77
MboI GATC 1 cut(s) 75
MboII GAAGA 2 cut(s) 5, 74
MluCI AATT 1 cut(s) 130
MnlI CCTC 1 cut(s) 118
MseI TTAA 1 cut(s) 33
MwoI GCNNNNNNNGC 1 cut(s) 108
NdeII GATC 1 cut(s) 75
NlaIII CATG 1 cut(s) 91
NspI RCATGY 1 cut(s) 91
PfeI GAWTC 1 cut(s) 25
PkrI GCNGC 2 cut(s) 47, 50
RsaI GTAC 1 cut(s) 86
RsaNI GTAC 1 cut(s) 85
SaqAI TTAA 1 cut(s) 33
SatI GCNGC 2 cut(s) 46, 49
Sau3AI GATC 1 cut(s) 75
SetI ASST 1 cut(s) 104
SfaNI GCATC 2 cut(s) 60, 60
SgeI CNNG 5 cut(s) 34, 41, 68, 100, 115
Sse9I AATT 1 cut(s) 130
StyI CCWWGG 1 cut(s) 55
TasI AATT 1 cut(s) 130
TatI WGTACW 1 cut(s) 84
TfiI GAWTC 1 cut(s) 25
Tru1I TTAA 1 cut(s) 33
Tru9I TTAA 1 cut(s) 33
TscAI CASTG 1 cut(s) 26
TseI GCWGC 2 cut(s) 45, 48
TspRI CASTG 1 cut(s) 26
XceI RCATGY 1 cut(s) 91
XcmI CCANNNNNNNNNTGG 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.