Prupe.4G193700_v2.0.a1

cysteine-rich repeat secretory protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Forward (+)
11656749 .. 11658747
1999 bp
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UTR
Exon/CDS
Intron
Prupe.4G193700.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 333 bp
ATGGACCATGTGGGCTACCTTTTGGATTCCTTGATCCGGATGGTGGTCCACTCCTTCCAATATAAAAATGTAGCAAATGATGAATATGCCATTTATTTGTTGGAGAGTGTTACATCATGCGAAAGTTGTCTCAGTAGAGCAAACCAACAAATTCGTATGCCTTGCACTCTCAATCGAGGAGCTATAATTTGGATGTTCGAATGCTTTTTAAAATACTCAGATACGAATTTTATTGGTGTAATTGACACGAATAACGGGATTTATTTGATGAGTTCAAAATTCGGTGGTGATCTCACGTTGATTCAACTTAAAGTTTATCAATTGTTAACTTGA

Protein Analysis

111

Amino Acids

12.62

Weight (kDa)

5.51

Isoelectric Point (pI)

30.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 36
AclWI GGATC 1 cut(s) 28
AcsI RAATTY 3 cut(s) 150, 226, 278
AfiI CCNNNNNNNGG 2 cut(s) 36, 43
AgsI TTSAA 2 cut(s) 276, 305
AluBI AGCT 1 cut(s) 182
AluI AGCT 1 cut(s) 182
Alw26I GTCTC 1 cut(s) 134
AlwI GGATC 1 cut(s) 28
Aor13HI TCCGGA 1 cut(s) 36
ApoI RAATTY 3 cut(s) 150, 226, 278
AspS9I GGNCC 2 cut(s) 4, 46
AsuHPI GGTGA 1 cut(s) 299
AsuII TTCGAA 1 cut(s) 198
AvaII GGWCC 2 cut(s) 4, 46
BccI CCATC 1 cut(s) 34
BcoDI GTCTC 1 cut(s) 134
Bme18I GGWCC 2 cut(s) 4, 46
BmgT120I GGNCC 2 cut(s) 4, 46
Bpu14I TTCGAA 1 cut(s) 198
BsaWI WCCGGW 1 cut(s) 36
Bsc4I CCNNNNNNNGG 2 cut(s) 36, 43
BseAI TCCGGA 1 cut(s) 36
BseGI GGATG 2 cut(s) 45, 198
BseLI CCNNNNNNNGG 2 cut(s) 36, 43
BseMII CTCAG 2 cut(s) 145, 231
BseRI GAGGAG 1 cut(s) 192
BsiSI CCGG 1 cut(s) 37
BslI CCNNNNNNNGG 2 cut(s) 36, 43
BsmAI GTCTC 1 cut(s) 134
BsmI GAATGC 1 cut(s) 206
Bsp119I TTCGAA 1 cut(s) 198
Bsp13I TCCGGA 1 cut(s) 36
Bsp143I GATC 2 cut(s) 33, 289
BspCNI CTCAG 2 cut(s) 144, 230
BspEI TCCGGA 1 cut(s) 36
BspPI GGATC 1 cut(s) 28
BspT104I TTCGAA 1 cut(s) 198
BssMI GATC 2 cut(s) 33, 289
BstBI TTCGAA 1 cut(s) 198
BstDEI CTNAG 2 cut(s) 131, 217
BstF5I GGATG 2 cut(s) 45, 198
BstKTI GATC 2 cut(s) 36, 292
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 2 cut(s) 33, 289
BtsCI GGATG 2 cut(s) 45, 198
Cfr13I GGNCC 2 cut(s) 4, 46
CviAII CATG 2 cut(s) 8, 117
CviJI RGCY 2 cut(s) 15, 182
CviKI_1 RGCY 2 cut(s) 15, 182
DdeI CTNAG 2 cut(s) 131, 217
DpnI GATC 2 cut(s) 35, 291
DpnII GATC 2 cut(s) 33, 289
DraI TTTAAA 1 cut(s) 210
Eco47I GGWCC 2 cut(s) 4, 46
FaeI CATG 2 cut(s) 11, 120
FaiI YATR 6 cut(s) 9, 63, 87, 118, 158, 185
FatI CATG 2 cut(s) 7, 116
FokI GGATG 2 cut(s) 52, 205
HapII CCGG 1 cut(s) 37
Hin1II CATG 2 cut(s) 11, 120
HincII GTYRAC 1 cut(s) 327
HindII GTYRAC 1 cut(s) 327
HinfI GANTC 2 cut(s) 26, 301
HpaI GTTAAC 1 cut(s) 327
HpaII CCGG 1 cut(s) 37
HphI GGTGA 1 cut(s) 299
Hpy166II GTNNAC 2 cut(s) 49, 327
Hpy188I TCNGA 1 cut(s) 220
Hpy188III TCNNGA 1 cut(s) 37
Hpy8I GTNNAC 2 cut(s) 49, 327
HpyAV CCTTC 1 cut(s) 64
HpyCH4IV ACGT 1 cut(s) 296
HpyCH4V TGCA 1 cut(s) 165
HpyF3I CTNAG 2 cut(s) 131, 217
HpySE526I ACGT 1 cut(s) 296
Hsp92II CATG 2 cut(s) 11, 120
Kpn2I TCCGGA 1 cut(s) 36
KspAI GTTAAC 1 cut(s) 327
Kzo9I GATC 2 cut(s) 33, 289
LmnI GCTCC 1 cut(s) 179
LpnPI CCDG 1 cut(s) 50
MaeII ACGT 1 cut(s) 296
MaeIII GTNAC 1 cut(s) 109
MalI GATC 2 cut(s) 35, 291
MboI GATC 2 cut(s) 33, 289
MfeI CAATTG 1 cut(s) 320
MluCI AATT 6 cut(s) 150, 186, 226, 240, 278, 320
MmeI TCCRAC 1 cut(s) 81
MnlI CCTC 1 cut(s) 170
MroI TCCGGA 1 cut(s) 36
MseI TTAA 3 cut(s) 209, 309, 326
MspI CCGG 1 cut(s) 37
MunI CAATTG 1 cut(s) 320
Mva1269I GAATGC 1 cut(s) 206
NdeII GATC 2 cut(s) 33, 289
NlaIII CATG 2 cut(s) 11, 120
NspV TTCGAA 1 cut(s) 198
PctI GAATGC 1 cut(s) 206
PfeI GAWTC 2 cut(s) 26, 301
PspPI GGNCC 2 cut(s) 4, 46
SaqAI TTAA 3 cut(s) 209, 309, 326
Sau3AI GATC 2 cut(s) 33, 289
Sau96I GGNCC 2 cut(s) 4, 46
SetI ASST 3 cut(s) 21, 184, 299
SfuI TTCGAA 1 cut(s) 198
SgeI CNNG 9 cut(s) 20, 43, 49, 129, 174, 188, 259, 268, 307
SinI GGWCC 2 cut(s) 4, 46
Sse9I AATT 6 cut(s) 150, 186, 226, 240, 278, 320
TaiI ACGT 1 cut(s) 299
TaqI TCGA 2 cut(s) 175, 198
TasI AATT 6 cut(s) 150, 186, 226, 240, 278, 320
TfiI GAWTC 2 cut(s) 26, 301
Tru1I TTAA 3 cut(s) 209, 309, 326
Tru9I TTAA 3 cut(s) 209, 309, 326
TspDTI ATGAA 1 cut(s) 96
VpaK11BI GGWCC 2 cut(s) 4, 46
XapI RAATTY 3 cut(s) 150, 226, 278
XcmI CCANNNNNNNNNTGG 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.