Prupe.4G198300_v2.0.a1

glucose-6-phosphate 1-epimerase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
12166341 .. 12170733
4393 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G198300.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 561 bp
ATGATGGTTACACGGATGCAGATTAGCAGGAAGTATAACAGAAAGGAAATCCACACCCGGTTACTTCACATTCATGGGGGGCCAGCGATCTTGGTGCTCCAACCATGGTCAGTAGTGAGAGTGGTTGGAAAAGGACCGGCCAGGGCCGACGATCAAGTCTGGGCTAAAGCCCAGCCATATCAGCCACTCACGACGCAACTGCGAGCTCGGAAAGAAGAGAGTATTTGCATGCATGCATTAGAAGAACCCAAAAAAGCCCAACAAGAAGAAGAAAAAAAAAAGCATGAGGAAGTGCGTGTTGAGGGCTTGGAGACAATTGATTATTTCGACAATCTGGCGCGTAGAGAAAGGTTCACGGAGCAGGCAGATGCTATTACCTTTGATGGCGAGTTTTCGCAGCAACTTGTTGCCAAACCAATTCACCTGCAGCACTTGTTCTTTCAATTTCAGTTGTATTTCAAGGTTGCTGGTTTACGAACATGGGGTTTTTGCTCTAGGTTCCTAGGTTTGTTCCAAACGGTTGTGTTTTCCATTATGTTTTTCAAGGTTGCTGGTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko01100 ko01110 ko01120 ko01130 map00010 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
Aldose_epim

Protein Analysis

187

Amino Acids

21.75

Weight (kDa)

9.42

Isoelectric Point (pI)

45.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 432
AasI GACNNNNNNGTC 1 cut(s) 155
Acc36I ACCTGC 1 cut(s) 432
AccII CGCG 1 cut(s) 340
AcoI YGGCCR 1 cut(s) 138
AgsI TTSAA 3 cut(s) 443, 460, 544
AjnI CCWGG 1 cut(s) 140
AluBI AGCT 1 cut(s) 206
AluI AGCT 1 cut(s) 206
Alw21I GWGCWC 2 cut(s) 99, 208
Alw26I GTCTC 1 cut(s) 305
AoxI GGCC 3 cut(s) 80, 138, 144
ApeKI GCWGC 2 cut(s) 397, 427
AspA2I CCTAGG 1 cut(s) 502
AspLEI GCGC 1 cut(s) 340
AspS9I GGNCC 3 cut(s) 80, 134, 144
AsuC2I CCSGG 1 cut(s) 58
AsuHPI GGTGA 1 cut(s) 413
AvaII GGWCC 1 cut(s) 134
AvrII CCTAGG 1 cut(s) 502
BanII GRGCYC 1 cut(s) 208
Bbv12I GWGCWC 2 cut(s) 99, 208
BbvI GCAGC 2 cut(s) 409, 439
BccI CCATC 1 cut(s) 377
BcgI CGANNNNNNTGC 4 cut(s) 76, 110, 181, 215
BciT130I CCWGG 1 cut(s) 142
BcnI CCSGG 1 cut(s) 58
BcoDI GTCTC 1 cut(s) 305
BfaI CTAG 2 cut(s) 495, 503
BfmI CTRYAG 1 cut(s) 425
BfuAI ACCTGC 1 cut(s) 432
BisI GCNGC 2 cut(s) 398, 428
BlnI CCTAGG 1 cut(s) 502
BlsI GCNGC 2 cut(s) 399, 429
Bme1390I CCNGG 2 cut(s) 58, 142
Bme18I GGWCC 1 cut(s) 134
BmgT120I GGNCC 3 cut(s) 80, 134, 144
BmiI GGNNCC 2 cut(s) 81, 500
BmrFI CCNGG 2 cut(s) 58, 142
BmsI GCATC 2 cut(s) 6, 358
BpuMI CCSGG 1 cut(s) 58
BsaJI CCNNGG 3 cut(s) 104, 141, 502
Bse118I RCCGGY 1 cut(s) 136
BseBI CCWGG 1 cut(s) 142
BseDI CCNNGG 3 cut(s) 104, 141, 502
BseGI GGATG 1 cut(s) 21
BseXI GCAGC 2 cut(s) 409, 439
BseYI CCCAGC 1 cut(s) 171
Bsh1236I CGCG 1 cut(s) 340
BshFI GGCC 3 cut(s) 82, 140, 146
BsiHKAI GWGCWC 2 cut(s) 99, 208
BsiSI CCGG 2 cut(s) 58, 137
BsmAI GTCTC 1 cut(s) 305
BsnI GGCC 3 cut(s) 82, 140, 146
Bsp1286I GDGCHC 2 cut(s) 99, 208
Bsp143I GATC 2 cut(s) 87, 151
Bsp19I CCATGG 1 cut(s) 104
BspANI GGCC 3 cut(s) 82, 140, 146
BspFNI CGCG 1 cut(s) 340
BspLI GGNNCC 2 cut(s) 81, 500
BspMAI CTGCAG 1 cut(s) 429
BspMI ACCTGC 1 cut(s) 432
BsrFI RCCGGY 1 cut(s) 136
BssAI RCCGGY 1 cut(s) 136
BssECI CCNNGG 3 cut(s) 104, 141, 502
BssMI GATC 2 cut(s) 87, 151
BssT1I CCWWGG 2 cut(s) 104, 502
Bst2UI CCWGG 1 cut(s) 142
Bst4CI ACNGT 1 cut(s) 520
Bst6I CTCTTC 1 cut(s) 210
BstC8I GCNNGC 5 cut(s) 84, 204, 230, 234, 363
BstDSI CCRYGG 1 cut(s) 104
BstF5I GGATG 1 cut(s) 21
BstFNI CGCG 1 cut(s) 340
BstHHI GCGC 1 cut(s) 340
BstKTI GATC 2 cut(s) 90, 154
BstMAI GTCTC 1 cut(s) 305
BstMBI GATC 2 cut(s) 87, 151
BstMWI GCNNNNNNNGC 1 cut(s) 181
BstNI CCWGG 1 cut(s) 142
BstNSI RCATGY 2 cut(s) 232, 236
BstSCI CCNGG 2 cut(s) 56, 140
BstSFI CTRYAG 1 cut(s) 425
BstUI CGCG 1 cut(s) 340
BstV1I GCAGC 2 cut(s) 409, 439
BsuRI GGCC 3 cut(s) 82, 140, 146
BtgI CCRYGG 1 cut(s) 104
BtsCI GGATG 1 cut(s) 21
BveI ACCTGC 1 cut(s) 432
Cac8I GCNNGC 5 cut(s) 84, 204, 230, 234, 363
CfoI GCGC 1 cut(s) 340
Cfr10I RCCGGY 1 cut(s) 136
Cfr13I GGNCC 3 cut(s) 80, 134, 144
CseI GACGC 1 cut(s) 202
CviAII CATG 6 cut(s) 74, 105, 229, 233, 284, 480
DpnI GATC 2 cut(s) 89, 153
DpnII GATC 2 cut(s) 87, 151
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
EaeI YGGCCR 1 cut(s) 138
Eam1104I CTCTTC 1 cut(s) 210
EarI CTCTTC 1 cut(s) 210
Ecl136II GAGCTC 1 cut(s) 206
Eco130I CCWWGG 2 cut(s) 104, 502
Eco24I GRGCYC 1 cut(s) 208
Eco47I GGWCC 1 cut(s) 134
Eco53kI GAGCTC 1 cut(s) 206
EcoICRI GAGCTC 1 cut(s) 206
EcoRII CCWGG 1 cut(s) 140
EcoT14I CCWWGG 2 cut(s) 104, 502
EcoT22I ATGCAT 2 cut(s) 234, 238
EcoT38I GRGCYC 1 cut(s) 208
ErhI CCWWGG 2 cut(s) 104, 502
FaeI CATG 6 cut(s) 77, 108, 232, 236, 287, 483
FatI CATG 6 cut(s) 73, 104, 228, 232, 283, 479
Fnu4HI GCNGC 2 cut(s) 398, 428
FokI GGATG 1 cut(s) 28
FriOI GRGCYC 1 cut(s) 208
Fsp4HI GCNGC 2 cut(s) 398, 428
FspBI CTAG 2 cut(s) 495, 503
GlaI GCGC 1 cut(s) 339
GluI GCNGC 2 cut(s) 398, 428
GsaI CCCAGC 1 cut(s) 175
HaeIII GGCC 3 cut(s) 82, 140, 146
HapII CCGG 2 cut(s) 58, 137
HgaI GACGC 1 cut(s) 202
HhaI GCGC 1 cut(s) 340
Hin1II CATG 6 cut(s) 77, 108, 232, 236, 287, 483
Hin6I GCGC 1 cut(s) 338
HinP1I GCGC 1 cut(s) 338
HpaII CCGG 2 cut(s) 58, 137
HphI GGTGA 1 cut(s) 413
Hpy166II GTNNAC 2 cut(s) 354, 473
Hpy188I TCNGA 1 cut(s) 210
Hpy188III TCNNGA 1 cut(s) 190
Hpy8I GTNNAC 2 cut(s) 354, 473
Hpy99I CGWCG 2 cut(s) 152, 196
HpyCH4III ACNGT 1 cut(s) 520
HpyCH4V TGCA 5 cut(s) 19, 228, 232, 236, 427
HpyF10VI GCNNNNNNNGC 1 cut(s) 181
Hsp92II CATG 6 cut(s) 77, 108, 232, 236, 287, 483
HspAI GCGC 1 cut(s) 338
Kzo9I GATC 2 cut(s) 87, 151
LmnI GCTCC 2 cut(s) 102, 358
Lsp1109I GCAGC 2 cut(s) 409, 439
LweI GCATC 2 cut(s) 6, 358
MaeI CTAG 2 cut(s) 495, 503
MaeIII GTNAC 2 cut(s) 7, 60
MalI GATC 2 cut(s) 89, 153
MboI GATC 2 cut(s) 87, 151
MboII GAAGA 4 cut(s) 227, 254, 278, 281
MfeI CAATTG 1 cut(s) 315
MhlI GDGCHC 2 cut(s) 99, 208
MluCI AATT 3 cut(s) 315, 417, 443
MmeI TCCRAC 2 cut(s) 106, 124
MnlI CCTC 2 cut(s) 280, 295
Mph1103I ATGCAT 2 cut(s) 234, 238
MslI CAYNNNNRTG 1 cut(s) 72
MspI CCGG 2 cut(s) 58, 137
MspR9I CCNGG 2 cut(s) 58, 142
MunI CAATTG 1 cut(s) 315
MvaI CCWGG 1 cut(s) 142
MvnI CGCG 1 cut(s) 340
MwoI GCNNNNNNNGC 1 cut(s) 181
NciI CCSGG 1 cut(s) 58
NcoI CCATGG 1 cut(s) 104
NdeII GATC 2 cut(s) 87, 151
NlaIII CATG 6 cut(s) 77, 108, 232, 236, 287, 483
NlaIV GGNNCC 2 cut(s) 81, 500
NsiI ATGCAT 2 cut(s) 234, 238
NspI RCATGY 2 cut(s) 232, 236
PaeI GCATGC 2 cut(s) 232, 236
PaqCI CACCTGC 1 cut(s) 432
PkrI GCNGC 2 cut(s) 399, 429
Psp124BI GAGCTC 1 cut(s) 208
Psp6I CCWGG 1 cut(s) 140
PspFI CCCAGC 1 cut(s) 171
PspGI CCWGG 1 cut(s) 140
PspN4I GGNNCC 2 cut(s) 81, 500
PspPI GGNCC 3 cut(s) 80, 134, 144
PstI CTGCAG 1 cut(s) 429
RseI CAYNNNNRTG 1 cut(s) 72
SacI GAGCTC 1 cut(s) 208
SatI GCNGC 2 cut(s) 398, 428
Sau3AI GATC 2 cut(s) 87, 151
Sau96I GGNCC 3 cut(s) 80, 134, 144
ScrFI CCNGG 2 cut(s) 58, 142
SduI GDGCHC 2 cut(s) 99, 208
SetI ASST 8 cut(s) 208, 353, 380, 426, 465, 500, 508, 549
SfaNI GCATC 2 cut(s) 6, 358
SfcI CTRYAG 1 cut(s) 425
SinI GGWCC 1 cut(s) 134
SmiMI CAYNNNNRTG 1 cut(s) 72
SphI GCATGC 2 cut(s) 232, 236
Sse9I AATT 3 cut(s) 315, 417, 443
SspMI CTAG 2 cut(s) 495, 503
SstI GAGCTC 1 cut(s) 208
StyD4I CCNGG 2 cut(s) 56, 140
StyI CCWWGG 2 cut(s) 104, 502
TaaI ACNGT 1 cut(s) 520
TaqI TCGA 1 cut(s) 327
TasI AATT 3 cut(s) 315, 417, 443
TseI GCWGC 2 cut(s) 397, 427
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 2 cut(s) 28, 371
VpaK11BI GGWCC 1 cut(s) 134
XceI RCATGY 2 cut(s) 232, 236
XmaJI CCTAGG 1 cut(s) 502
XspI CTAG 2 cut(s) 495, 503
Zsp2I ATGCAT 2 cut(s) 234, 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.