Prupe.4G201400_v2.0.a1

cell redox homeostasis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Forward (+)
12519366 .. 12521208
1843 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G201400.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 228 bp
ATGGATGTGCATGATCAGCGGCAGCTCAAGAAGTCAAGGGTTGTCAGAGTGAACTCTGAGGAATTATGGGATTTCTTTATCACTCAAGCTGCCAATCAAGGCTGCCCTGGAGTTGCCCTCAAGATGGAAATTAAAGCCATGCCTACTTTCCTCATGATGAAAGGAGGAGGCTCAACTGATAAGCTTGTGGGTGCTAATCCATATGCCATCAAGAAAATGCTCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000280 GO:0000803 GO:0000806 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006457 GO:0006950 GO:0006979 GO:0006996 GO:0007049 GO:0007143 GO:0007154 GO:0007165 GO:0007267 GO:0007276 GO:0007292 GO:0008150 GO:0008152 GO:0008283 GO:0009314 GO:0009628 GO:0009636 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0015035 GO:0015036 GO:0016043 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0019220 GO:0019222 GO:0019725 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032148 GO:0032268 GO:0032270 GO:0032386 GO:0032501 GO:0032502 GO:0032504 GO:0032879 GO:0032880 GO:0033135 GO:0033138 GO:0033157 GO:0033158 GO:0033554 GO:0033674 GO:0034599 GO:0042221 GO:0042306 GO:0042325 GO:0042327 GO:0042592 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043388 GO:0043549 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045454 GO:0045859 GO:0045860 GO:0045937 GO:0046822 GO:0047134 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048609 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051098 GO:0051099 GO:0051101 GO:0051171 GO:0051173 GO:0051174 GO:0051223 GO:0051246 GO:0051247 GO:0051321 GO:0051338 GO:0051347 GO:0051704 GO:0051716 GO:0051896 GO:0051897 GO:0055114 GO:0060255 GO:0060322 GO:0060341 GO:0060548 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070887 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0097237 GO:0098754 GO:0098869 GO:0140013 GO:1900180 GO:1900407 GO:1900408 GO:1901031 GO:1901032 GO:1902531 GO:1902533 GO:1902882 GO:1902883 GO:1903046 GO:1903201 GO:1903202 GO:1903205 GO:1903206 GO:1903827 GO:1904589 GO:1990748 GO:2001023 GO:2001024 GO:2001038 GO:2001039
KEGG Pathways
Metabolic & Signaling
ko04621 ko05418 map04621 map05418
Pfam Domains
Protein Families
Thioredoxin

Protein Analysis

76

Amino Acids

8.4

Weight (kDa)

9.67

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 19
AfiI CCNNNNNNNGG 1 cut(s) 124
AjnI CCWGG 1 cut(s) 106
AluBI AGCT 3 cut(s) 25, 89, 184
AluI AGCT 3 cut(s) 25, 89, 184
ApeKI GCWGC 3 cut(s) 22, 89, 102
BbvI GCAGC 3 cut(s) 34, 76, 89
BccI CCATC 2 cut(s) 118, 215
BciT130I CCWGG 1 cut(s) 108
BclI TGATCA 1 cut(s) 13
BisI GCNGC 4 cut(s) 20, 23, 90, 103
BlsI GCNGC 4 cut(s) 21, 24, 91, 104
Bme1390I CCNGG 1 cut(s) 108
BmrFI CCNGG 1 cut(s) 108
BplI GAGNNNNNCTC 2 cut(s) 102, 134
BpmI CTGGAG 1 cut(s) 129
BpuEI CTTGAG 3 cut(s) 11, 69, 104
BsaJI CCNNGG 1 cut(s) 106
Bsc4I CCNNNNNNNGG 1 cut(s) 124
BseBI CCWGG 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 106
BseGI GGATG 1 cut(s) 10
BseLI CCNNNNNNNGG 1 cut(s) 124
BseMII CTCAG 1 cut(s) 48
BseRI GAGGAG 1 cut(s) 180
BseXI GCAGC 3 cut(s) 34, 76, 89
BslI CCNNNNNNNGG 1 cut(s) 124
Bsp143I GATC 1 cut(s) 13
BspACI CCGC 1 cut(s) 19
BspCNI CTCAG 1 cut(s) 49
BspHI TCATGA 1 cut(s) 153
BssECI CCNNGG 1 cut(s) 106
BssMI GATC 1 cut(s) 13
Bst2UI CCWGG 1 cut(s) 108
BstDEI CTNAG 1 cut(s) 57
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 1 cut(s) 16
BstMBI GATC 1 cut(s) 13
BstMWI GCNNNNNNNGC 1 cut(s) 16
BstNI CCWGG 1 cut(s) 108
BstSCI CCNGG 1 cut(s) 106
BstV1I GCAGC 3 cut(s) 34, 76, 89
BtsCI GGATG 1 cut(s) 10
CciI TCATGA 1 cut(s) 153
CviAII CATG 3 cut(s) 11, 139, 154
CviJI RGCY 6 cut(s) 25, 89, 102, 137, 171, 184
CviKI_1 RGCY 6 cut(s) 25, 89, 102, 137, 171, 184
DdeI CTNAG 1 cut(s) 57
DpnI GATC 1 cut(s) 15
DpnII GATC 1 cut(s) 13
EcoRII CCWGG 1 cut(s) 106
FaeI CATG 3 cut(s) 14, 142, 157
FaiI YATR 6 cut(s) 12, 67, 140, 155, 202, 204
FatI CATG 3 cut(s) 10, 138, 153
FauNDI CATATG 1 cut(s) 202
FbaI TGATCA 1 cut(s) 13
Fnu4HI GCNGC 4 cut(s) 20, 23, 90, 103
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 4 cut(s) 20, 23, 90, 103
GluI GCNGC 4 cut(s) 20, 23, 90, 103
GsuI CTGGAG 1 cut(s) 129
Hin1II CATG 3 cut(s) 14, 142, 157
HindIII AAGCTT 1 cut(s) 182
Hpy166II GTNNAC 1 cut(s) 52
Hpy188I TCNGA 2 cut(s) 47, 58
Hpy188III TCNNGA 4 cut(s) 28, 121, 154, 211
Hpy8I GTNNAC 1 cut(s) 52
HpyCH4V TGCA 1 cut(s) 10
HpyF10VI GCNNNNNNNGC 1 cut(s) 16
HpyF3I CTNAG 1 cut(s) 57
Hsp92II CATG 3 cut(s) 14, 142, 157
Ksp22I TGATCA 1 cut(s) 13
Kzo9I GATC 1 cut(s) 13
LpnPI CCDG 2 cut(s) 93, 120
Lsp1109I GCAGC 3 cut(s) 34, 76, 89
MalI GATC 1 cut(s) 15
MboI GATC 1 cut(s) 13
MluCI AATT 2 cut(s) 62, 129
MnlI CCTC 5 cut(s) 52, 128, 158, 161, 161
MseI TTAA 1 cut(s) 132
MspA1I CMGCKG 1 cut(s) 19
MspR9I CCNGG 1 cut(s) 108
MvaI CCWGG 1 cut(s) 108
MwoI GCNNNNNNNGC 1 cut(s) 16
NdeI CATATG 1 cut(s) 202
NdeII GATC 1 cut(s) 13
NlaIII CATG 3 cut(s) 14, 142, 157
PagI TCATGA 1 cut(s) 153
PkrI GCNGC 4 cut(s) 21, 24, 91, 104
Psp6I CCWGG 1 cut(s) 106
PspGI CCWGG 1 cut(s) 106
SaqAI TTAA 1 cut(s) 132
SatI GCNGC 4 cut(s) 20, 23, 90, 103
Sau3AI GATC 1 cut(s) 13
ScrFI CCNGG 1 cut(s) 108
SetI ASST 3 cut(s) 27, 91, 186
SmlI CTYRAG 3 cut(s) 26, 84, 119
SmoI CTYRAG 3 cut(s) 26, 84, 119
Sse9I AATT 2 cut(s) 62, 129
SsiI CCGC 1 cut(s) 19
StyD4I CCNGG 1 cut(s) 106
TasI AATT 2 cut(s) 62, 129
TauI GCSGC 1 cut(s) 22
Tru1I TTAA 1 cut(s) 132
Tru9I TTAA 1 cut(s) 132
TseI GCWGC 3 cut(s) 22, 89, 102
TspDTI ATGAA 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.