Prupe.4G214300_v2.0.a1

Indole-3-acetate O-methyltransferase 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
13377484 .. 13381806
4323 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G214300.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 1149 bp
ATGGCTCCCAAGGGAGACAATGTTATTACAAAGCTTGAGAAGATACTAAGCATGAAAGGAGGCAAAGGAGAGTTAAGCTATGCTAACAATTCCAAATCCCAGGCCGAACATGCAAGATCCATGCTTCCCCTGCTTAAAGAAACCCTAGACAGAGTGCAACTGAGCTCTCGAGAAGCCCCCTTTGTGGTTGTGGACCTTGGATGCTCAAGTGGAAGCAACACCATCTACATCATAGACGTGATCATCAAACACATGGCCAAGCGCTATGAGGCCTTGGGATATCACCCGCCTGAGTTCGCAGCCTTTTTCTCTGATCTCCCTAGCAATGACTTCAACACCCTCTTCCAGTTCCTCCCTCCAATGGCCAACCACGGTGGTAGCATGGAGGAGACCATCGCAGCCGACAGCCACCGCTCCTACTTCGCTGCAGGGGTACCCGGCTCCTTCTACCGGCGGCTTTTTCCTTCAAGGTCCATTGACGTTTTTCACTCGGCGTTTTCTTTGCATTGGCTCTCACAGGTGCCAGAGAGTGTGCTGGACATGAAATCAGCAGCCTACAACAAGGGAAGGGTGTTTATTCATGGAGCAAATAAGAGCACGGCCAATGCATACAAGAAGCAGTTCCAGACAGACTTGGCAAGCTTTCTCAGGTCAAGAGCCAAGGAGCTCAAGAAAGGTGGCTCTATGTTTCTCGTCTGTTTGGGAAGGACCTCAGTGGACCCCACTGACCAAAGTGGCCTAGGCCTTCTCTTGGGGACCTACATTCAGGGTGCTTGGGATGATCTTGTCCAAGAGGGTCTTATCAATAGTGAGAAGCGTGACAGTTTCAACATTCCTGTGTATGCTTCAAGCTTACAAGATTTCAGGGAAGTAGTGGAAGCTGATGGCTCATTCACCATAAACAAGCTTGAGATTTTCAAAGGAGGAAGCCCCATTGTAGTAAACCAACCAGATGATGCAGCCGAAGTCGGTCGAGCCCTTGCCAACACTTGTAGGAGTGCAACCGGAGTGCTCATTGATGCACACATAGGTGAGCACCTTGGCAATGAGTTGTTTTCAAGAGTGGAACAAAGGAGCTCAAGACATGCCAAAGAGCTACTGGAGCATATACAAATGTTTTACATAGTGGCATCAATTTCTCTTGCTTAA

Protein Analysis

383

Amino Acids

42.05

Weight (kDa)

6.64

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 433
AccB1I GGYRCC 2 cut(s) 433, 520
AccBSI CCGCTC 1 cut(s) 414
AciI CCGC 3 cut(s) 287, 412, 454
AclWI GGATC 1 cut(s) 111
AcoI YGGCCR 3 cut(s) 255, 363, 600
AfaI GTAC 1 cut(s) 435
AfeI AGCGCT 1 cut(s) 263
AfiI CCNNNNNNNGG 4 cut(s) 184, 361, 450, 751
AgsI TTSAA 6 cut(s) 334, 468, 829, 849, 919, 1059
AjiI CACGTC 1 cut(s) 238
AjnI CCWGG 1 cut(s) 99
AleI CACNNNNGTG 1 cut(s) 1029
Alw21I GWGCWC 6 cut(s) 167, 599, 669, 1014, 1038, 1079
Alw26I GTCTC 2 cut(s) 9, 383
AlwI GGATC 1 cut(s) 111
Ama87I CYCGRG 1 cut(s) 168
Aor51HI AGCGCT 1 cut(s) 263
AoxI GGCC 7 cut(s) 102, 255, 270, 363, 600, 736, 742
ApeKI GCWGC 5 cut(s) 299, 398, 425, 551, 959
Asp700I GAANNNNTTC 1 cut(s) 620
Asp718I GGTACC 1 cut(s) 433
AspA2I CCTAGG 1 cut(s) 739
AspLEI GCGC 1 cut(s) 264
AspS9I GGNCC 5 cut(s) 193, 471, 708, 718, 756
AsuC2I CCSGG 1 cut(s) 438
AsuHPI GGTGA 3 cut(s) 275, 886, 1043
AvaI CYCGRG 1 cut(s) 168
AvaII GGWCC 5 cut(s) 193, 471, 708, 718, 756
AvrII CCTAGG 1 cut(s) 739
BalI TGGCCA 2 cut(s) 257, 365
BanI GGYRCC 2 cut(s) 433, 520
BanII GRGCYC 4 cut(s) 167, 669, 979, 1079
Bbv12I GWGCWC 6 cut(s) 167, 599, 669, 1014, 1038, 1079
BbvI GCAGC 5 cut(s) 311, 410, 412, 563, 971
BccI CCATC 3 cut(s) 230, 401, 878
BceAI ACGGC 1 cut(s) 615
BciT130I CCWGG 1 cut(s) 101
BclI TGATCA 1 cut(s) 240
BcnI CCSGG 1 cut(s) 438
BcoDI GTCTC 2 cut(s) 9, 383
BfaI CTAG 3 cut(s) 146, 321, 740
BfmI CTRYAG 1 cut(s) 426
BfoI RGCGCY 1 cut(s) 265
BisI GCNGC 6 cut(s) 300, 399, 426, 455, 552, 960
BlnI CCTAGG 1 cut(s) 739
BlsI GCNGC 6 cut(s) 301, 400, 427, 456, 553, 961
Bme1390I CCNGG 2 cut(s) 101, 438
Bme18I GGWCC 5 cut(s) 193, 471, 708, 718, 756
BmeT110I CYCGRG 1 cut(s) 168
BmgBI CACGTC 1 cut(s) 238
BmgT120I GGNCC 5 cut(s) 193, 471, 708, 718, 756
BmiI GGNNCC 6 cut(s) 6, 435, 442, 522, 720, 757
BmrFI CCNGG 2 cut(s) 101, 438
BmsI GCATC 4 cut(s) 191, 946, 1009, 1139
BpmI CTGGAG 1 cut(s) 1121
BpuEI CTTGAG 5 cut(s) 56, 190, 653, 929, 1063
BpuMI CCSGG 1 cut(s) 438
BsaI GGTCTC 1 cut(s) 383
BsaJI CCNNGG 8 cut(s) 9, 99, 196, 273, 370, 660, 739, 1039
BsaWI WCCGGW 1 cut(s) 1004
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 4 cut(s) 184, 361, 450, 751
Bse118I RCCGGY 1 cut(s) 450
Bse1I ACTGG 2 cut(s) 346, 1104
Bse3DI GCAATG 2 cut(s) 331, 1051
BseBI CCWGG 1 cut(s) 101
BseDI CCNNGG 8 cut(s) 9, 99, 196, 273, 370, 660, 739, 1039
BseGI GGATG 2 cut(s) 206, 784
BseLI CCNNNNNNNGG 4 cut(s) 184, 361, 450, 751
BseMI GCAATG 2 cut(s) 331, 1051
BseMII CTCAG 4 cut(s) 152, 282, 661, 726
BseNI ACTGG 2 cut(s) 346, 1104
BseRI GAGGAG 1 cut(s) 401
BseXI GCAGC 5 cut(s) 311, 410, 412, 563, 971
Bsh1285I CGRYCG 1 cut(s) 973
BshFI GGCC 7 cut(s) 104, 257, 272, 365, 602, 738, 744
BshNI GGYRCC 2 cut(s) 433, 520
BsiEI CGRYCG 1 cut(s) 973
BsiHKAI GWGCWC 6 cut(s) 167, 599, 669, 1014, 1038, 1079
BsiHKCI CYCGRG 1 cut(s) 168
BsiSI CCGG 3 cut(s) 438, 451, 1005
BslFI GGGAC 1 cut(s) 769
BslI CCNNNNNNNGG 4 cut(s) 184, 361, 450, 751
BsmAI GTCTC 2 cut(s) 9, 383
BsmFI GGGAC 1 cut(s) 769
BsnI GGCC 7 cut(s) 104, 257, 272, 365, 602, 738, 744
Bso31I GGTCTC 1 cut(s) 383
BsoBI CYCGRG 1 cut(s) 168
Bsp1286I GDGCHC 7 cut(s) 167, 599, 669, 979, 1014, 1038, 1079
Bsp143I GATC 4 cut(s) 116, 240, 313, 781
BspACI CCGC 3 cut(s) 287, 412, 454
BspANI GGCC 7 cut(s) 104, 257, 272, 365, 602, 738, 744
BspCNI CTCAG 4 cut(s) 153, 283, 660, 725
BspLI GGNNCC 6 cut(s) 6, 435, 442, 522, 720, 757
BspMAI CTGCAG 1 cut(s) 430
BspPI GGATC 1 cut(s) 111
BspT107I GGYRCC 2 cut(s) 433, 520
BspTNI GGTCTC 1 cut(s) 383
BsrBI CCGCTC 1 cut(s) 414
BsrDI GCAATG 2 cut(s) 331, 1051
BsrFI RCCGGY 1 cut(s) 450
BsrI ACTGG 2 cut(s) 346, 1104
BssAI RCCGGY 1 cut(s) 450
BssECI CCNNGG 8 cut(s) 9, 99, 196, 273, 370, 660, 739, 1039
BssMI GATC 4 cut(s) 116, 240, 313, 781
BssT1I CCWWGG 6 cut(s) 9, 196, 273, 660, 739, 1039
Bst2UI CCWGG 1 cut(s) 101
Bst4CI ACNGT 2 cut(s) 374, 824
Bst6I CTCTTC 1 cut(s) 347
BstC8I GCNNGC 1 cut(s) 640
BstDEI CTNAG 5 cut(s) 47, 161, 291, 647, 712
BstDSI CCRYGG 1 cut(s) 370
BstF5I GGATG 2 cut(s) 206, 784
BstH2I RGCGCY 1 cut(s) 265
BstHHI GCGC 1 cut(s) 264
BstKTI GATC 4 cut(s) 119, 243, 316, 784
BstMAI GTCTC 2 cut(s) 9, 383
BstMBI GATC 4 cut(s) 116, 240, 313, 781
BstMCI CGRYCG 1 cut(s) 973
BstMWI GCNNNNNNNGC 3 cut(s) 110, 130, 1102
BstNI CCWGG 1 cut(s) 101
BstNSI RCATGY 2 cut(s) 113, 1088
BstSCI CCNGG 2 cut(s) 99, 436
BstSFI CTRYAG 1 cut(s) 426
BstV1I GCAGC 5 cut(s) 311, 410, 412, 563, 971
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
BsuRI GGCC 7 cut(s) 104, 257, 272, 365, 602, 738, 744
BtgI CCRYGG 1 cut(s) 370
BtgZI GCGATG 1 cut(s) 379
BtrI CACGTC 1 cut(s) 238
BtsCI GGATG 2 cut(s) 206, 784
BtsIMutI CAGTG 2 cut(s) 720, 723
Cac8I GCNNGC 1 cut(s) 640
CfoI GCGC 1 cut(s) 264
Cfr10I RCCGGY 1 cut(s) 450
Cfr13I GGNCC 5 cut(s) 193, 471, 708, 718, 756
Csp6I GTAC 1 cut(s) 434
CspCI CAANNNNNGTGG 4 cut(s) 355, 390, 658, 693
CviAII CATG 8 cut(s) 52, 110, 121, 253, 382, 541, 581, 1085
CviQI GTAC 1 cut(s) 434
DdeI CTNAG 5 cut(s) 47, 161, 291, 647, 712
DpnI GATC 4 cut(s) 118, 242, 315, 783
DpnII GATC 4 cut(s) 116, 240, 313, 781
EaeI YGGCCR 3 cut(s) 255, 363, 600
Eam1104I CTCTTC 1 cut(s) 347
EarI CTCTTC 1 cut(s) 347
Ecl136II GAGCTC 3 cut(s) 165, 667, 1077
Eco130I CCWWGG 6 cut(s) 9, 196, 273, 660, 739, 1039
Eco147I AGGCCT 2 cut(s) 272, 744
Eco24I GRGCYC 4 cut(s) 167, 669, 979, 1079
Eco31I GGTCTC 1 cut(s) 383
Eco32I GATATC 1 cut(s) 281
Eco47I GGWCC 5 cut(s) 193, 471, 708, 718, 756
Eco47III AGCGCT 1 cut(s) 263
Eco53kI GAGCTC 3 cut(s) 165, 667, 1077
Eco88I CYCGRG 1 cut(s) 168
EcoICRI GAGCTC 3 cut(s) 165, 667, 1077
EcoO109I RGGNCCY 2 cut(s) 708, 756
EcoRII CCWGG 1 cut(s) 99
EcoRV GATATC 1 cut(s) 281
EcoT14I CCWWGG 6 cut(s) 9, 196, 273, 660, 739, 1039
EcoT22I ATGCAT 1 cut(s) 610
EcoT38I GRGCYC 4 cut(s) 167, 669, 979, 1079
ErhI CCWWGG 6 cut(s) 9, 196, 273, 660, 739, 1039
FaeI CATG 8 cut(s) 55, 113, 124, 256, 385, 544, 584, 1088
FalI AAGNNNNNCTT 2 cut(s) 783, 815
FaqI GGGAC 1 cut(s) 769
FatI CATG 8 cut(s) 51, 109, 120, 252, 381, 540, 580, 1084
FauI CCCGC 1 cut(s) 294
FbaI TGATCA 1 cut(s) 240
Fnu4HI GCNGC 6 cut(s) 300, 399, 426, 455, 552, 960
FokI GGATG 2 cut(s) 213, 791
FriOI GRGCYC 4 cut(s) 167, 669, 979, 1079
Fsp4HI GCNGC 6 cut(s) 300, 399, 426, 455, 552, 960
FspBI CTAG 3 cut(s) 146, 321, 740
GlaI GCGC 1 cut(s) 263
GluI GCNGC 6 cut(s) 300, 399, 426, 455, 552, 960
GsuI CTGGAG 1 cut(s) 1121
HaeII RGCGCY 1 cut(s) 265
HaeIII GGCC 7 cut(s) 104, 257, 272, 365, 602, 738, 744
HapII CCGG 3 cut(s) 438, 451, 1005
HhaI GCGC 1 cut(s) 264
Hin1II CATG 8 cut(s) 55, 113, 124, 256, 385, 544, 584, 1088
Hin6I GCGC 1 cut(s) 262
HinP1I GCGC 1 cut(s) 262
HindIII AAGCTT 4 cut(s) 32, 640, 850, 905
HpaII CCGG 3 cut(s) 438, 451, 1005
HphI GGTGA 3 cut(s) 275, 886, 1043
Hpy166II GTNNAC 3 cut(s) 193, 718, 943
Hpy188I TCNGA 1 cut(s) 313
Hpy188III TCNNGA 7 cut(s) 168, 170, 625, 654, 670, 1059, 1080
Hpy8I GTNNAC 3 cut(s) 193, 718, 943
HpyAV CCTTC 5 cut(s) 454, 474, 561, 699, 755
HpyCH4III ACNGT 2 cut(s) 374, 824
HpyCH4IV ACGT 2 cut(s) 237, 480
HpyCH4V TGCA 8 cut(s) 113, 157, 428, 505, 608, 959, 1001, 1022
HpyF10VI GCNNNNNNNGC 3 cut(s) 110, 130, 1102
HpyF3I CTNAG 5 cut(s) 47, 161, 291, 647, 712
HpySE526I ACGT 2 cut(s) 237, 480
Hsp92II CATG 8 cut(s) 55, 113, 124, 256, 385, 544, 584, 1088
HspAI GCGC 1 cut(s) 262
KpnI GGTACC 1 cut(s) 437
Ksp22I TGATCA 1 cut(s) 240
Kzo9I GATC 4 cut(s) 116, 240, 313, 781
LmnI GCTCC 7 cut(s) 10, 419, 446, 584, 664, 1074, 1102
Lsp1109I GCAGC 5 cut(s) 311, 410, 412, 563, 971
LweI GCATC 4 cut(s) 191, 946, 1009, 1139
MaeI CTAG 3 cut(s) 146, 321, 740
MaeII ACGT 2 cut(s) 237, 480
MaeIII GTNAC 1 cut(s) 818
MalI GATC 4 cut(s) 118, 242, 315, 783
MbiI CCGCTC 1 cut(s) 414
MboI GATC 4 cut(s) 116, 240, 313, 781
MboII GAAGA 2 cut(s) 52, 334
MflI RGATCY 1 cut(s) 116
MhlI GDGCHC 7 cut(s) 167, 599, 669, 979, 1014, 1038, 1079
MlsI TGGCCA 2 cut(s) 257, 365
MluCI AATT 2 cut(s) 88, 1134
MluNI TGGCCA 2 cut(s) 257, 365
MnlI CCTC 9 cut(s) 53, 262, 350, 362, 366, 379, 721, 787, 917
Mox20I TGGCCA 2 cut(s) 257, 365
Mph1103I ATGCAT 1 cut(s) 610
MroXI GAANNNNTTC 1 cut(s) 620
MscI TGGCCA 2 cut(s) 257, 365
MseI TTAA 3 cut(s) 74, 135, 1147
MslI CAYNNNNRTG 3 cut(s) 236, 836, 1029
Msp20I TGGCCA 2 cut(s) 257, 365
MspI CCGG 3 cut(s) 438, 451, 1005
MspR9I CCNGG 2 cut(s) 101, 438
MvaI CCWGG 1 cut(s) 101
MwoI GCNNNNNNNGC 3 cut(s) 110, 130, 1102
NciI CCSGG 1 cut(s) 438
NdeII GATC 4 cut(s) 116, 240, 313, 781
NlaIII CATG 8 cut(s) 55, 113, 124, 256, 385, 544, 584, 1088
NlaIV GGNNCC 6 cut(s) 6, 435, 442, 522, 720, 757
NmeAIII GCCGAG 1 cut(s) 470
NmuCI GTSAC 1 cut(s) 818
NsiI ATGCAT 1 cut(s) 610
NspI RCATGY 2 cut(s) 113, 1088
OliI CACNNNNGTG 1 cut(s) 1029
PaeR7I CTCGAG 1 cut(s) 168
PceI AGGCCT 2 cut(s) 272, 744
PdmI GAANNNNTTC 1 cut(s) 620
PkrI GCNGC 6 cut(s) 301, 400, 427, 456, 553, 961
PpuMI RGGWCCY 2 cut(s) 708, 756
Psp124BI GAGCTC 3 cut(s) 167, 669, 1079
Psp5II RGGWCCY 2 cut(s) 708, 756
Psp6I CCWGG 1 cut(s) 99
PspGI CCWGG 1 cut(s) 99
PspN4I GGNNCC 6 cut(s) 6, 435, 442, 522, 720, 757
PspPI GGNCC 5 cut(s) 193, 471, 708, 718, 756
PspPPI RGGWCCY 2 cut(s) 708, 756
PstI CTGCAG 1 cut(s) 430
PsuI RGATCY 1 cut(s) 116
RsaI GTAC 1 cut(s) 435
RsaNI GTAC 1 cut(s) 434
RseI CAYNNNNRTG 3 cut(s) 236, 836, 1029
SacI GAGCTC 3 cut(s) 167, 669, 1079
SaqAI TTAA 3 cut(s) 74, 135, 1147
SatI GCNGC 6 cut(s) 300, 399, 426, 455, 552, 960
Sau3AI GATC 4 cut(s) 116, 240, 313, 781
Sau96I GGNCC 5 cut(s) 193, 471, 708, 718, 756
ScrFI CCNGG 2 cut(s) 101, 438
SduI GDGCHC 7 cut(s) 167, 599, 669, 979, 1014, 1038, 1079
SfaNI GCATC 4 cut(s) 191, 946, 1009, 1139
SfcI CTRYAG 1 cut(s) 426
Sfr274I CTCGAG 1 cut(s) 168
SinI GGWCC 5 cut(s) 193, 471, 708, 718, 756
SlaI CTCGAG 1 cut(s) 168
SmiMI CAYNNNNRTG 3 cut(s) 236, 836, 1029
SmlI CTYRAG 6 cut(s) 35, 168, 205, 668, 908, 1078
SmoI CTYRAG 6 cut(s) 35, 168, 205, 668, 908, 1078
Sse9I AATT 2 cut(s) 88, 1134
SseBI AGGCCT 2 cut(s) 272, 744
SsiI CCGC 3 cut(s) 287, 412, 454
SspMI CTAG 3 cut(s) 146, 321, 740
SstI GAGCTC 3 cut(s) 167, 669, 1079
StuI AGGCCT 2 cut(s) 272, 744
StyD4I CCNGG 2 cut(s) 99, 436
StyI CCWWGG 6 cut(s) 9, 196, 273, 660, 739, 1039
TaaI ACNGT 2 cut(s) 374, 824
TaiI ACGT 2 cut(s) 240, 483
TaqI TCGA 2 cut(s) 169, 973
TaqII GACCGA 1 cut(s) 959
TasI AATT 2 cut(s) 88, 1134
TauI GCSGC 1 cut(s) 457
Tru1I TTAA 3 cut(s) 74, 135, 1147
Tru9I TTAA 3 cut(s) 74, 135, 1147
TscAI CASTG 2 cut(s) 720, 730
TseFI GTSAC 1 cut(s) 818
TseI GCWGC 5 cut(s) 299, 398, 425, 551, 959
Tsp45I GTSAC 1 cut(s) 818
TspDTI ATGAA 3 cut(s) 68, 557, 569
TspRI CASTG 2 cut(s) 720, 730
VpaK11BI GGWCC 5 cut(s) 193, 471, 708, 718, 756
XceI RCATGY 2 cut(s) 113, 1088
XcmI CCANNNNNNNNNTGG 1 cut(s) 1096
XhoI CTCGAG 1 cut(s) 168
XmaJI CCTAGG 1 cut(s) 739
XmnI GAANNNNTTC 1 cut(s) 620
XspI CTAG 3 cut(s) 146, 321, 740
Zsp2I ATGCAT 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.