Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

14053850 .. 14057893

Gene Structure 4044 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G223800.1_v2.0.a1.CDS.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGGGGTCCGCTCAGACCTCCACAGGTATCGATAGCCATTTTTCCGGCCAGTTCGTGGGGTCAAACGACCCCTCTTGTCCCTTAATCCGTCTGCCCCTGCCTCCCAGTCAAACCCACCATCGCCTCCTCGTCTCTCTAACACCATCTCTTGCGGCTACTGCGATTTCAAGTCATCTGATATTGCTGCTCAGGGACACCAGGACTATATGGCTTCAGATGCCAACCTTTCGGAAGCGCAGGGCTCTTAAGGGAGACAATGTATCAGTTTCAAGTGTAAACCTCGAGAAGATACTTAGCATGAAAGGAGGCAAAGGAGAGTTAAGCTATGCTAACAATTCCAAAGCCCAGGCCAAACATGCCAGTTCCATGCTTCACCTGCTTAAAGAAACCCTAGACAGAGTGCAGCTGAGCTCTCCGGAAGTCCCCTTTGTGGTTGCGGACCTTGGATGCTCAAGTGGAAGCAACAGCATCAGCACCCTTTTCCCGTCGAGGTACATTGACCTTTTTCACTTGGCGTTTTCCTTGCATTGGCTCTCACAGGTGCCAAAGAGTGTGCTAGACAAGAGATCAGCAGCCTACAACAAAGGGAGGGTGTTCATTCATGGAGCAAATGAGAGCCATTGCATACAAGAAGCAGTTCCAGACAGACTTGGCAAGCTTTCTCAGGGTCTTATCACTAGTGAGAAACGCAATAGTTTCAACTTTCCTGGGTATGCCTCAAGCTTACAAGACTTCAAGGAAGTAGAGGAAGCTGATGGTTCATTCACCATAAACAAGCTTGAGATTTTCAATGGAGGAAGCCCCCTTGTAGTGAACCAAACAGATAATGCGGCTCAAGTTGGTCGAGCCCTTGCCAACAGTTGTAGGAGTGCGGGCAGAGTGCTCATCGATGCACGCATCGGTGAACACCTTAGCAATGAGTTGTTTTCGAGAGTGGAACAAAGGAGCTCAAGACATGCCAAAGAGATACTGGAGCAAATACAATTCTTTTACATAGTGGCATCACTTTCTCTTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003002 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008168 GO:0009798 GO:0009943 GO:0009944 GO:0009955 GO:0010252 GO:0016740 GO:0016741 GO:0032259 GO:0032501 GO:0032502 GO:0042592 GO:0042802 GO:0043167 GO:0043169 GO:0046872 GO:0048856 GO:0048878 GO:0051749 GO:0065001 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_7

Protein Analysis

340

Amino Acids

37.1

Weight (kDa)

9.28

Isoelectric Point (pI)

46.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	384
Acc36I	ACCTGC	1 cut(s)	384
AccB1I	GGYRCC	1 cut(s)	541
AccB7I	CCANNNNNTGG	1 cut(s)	55
AccBSI	CCGCTC	1 cut(s)	11
AccIII	TCCGGA	1 cut(s)	415
AciI	CCGC	5 cut(s)	9, 152, 437, 830, 872
AcoI	YGGCCR	1 cut(s)	46
AcuI	CTGAAG	1 cut(s)	197
AfaI	GTAC	1 cut(s)	494
AfiI	CCNNNNNNNGG	3 cut(s)	55, 430, 528
AflII	CTTAAG	1 cut(s)	245
AgsI	TTSAA	5 cut(s)	168, 270, 700, 736, 790
AhlI	ACTAGT	1 cut(s)	677
AjnI	CCWGG	3 cut(s)	197, 345, 706
AluBI	AGCT	8 cut(s)	324, 406, 411, 658, 723, 752, 778, 948
AluI	AGCT	8 cut(s)	324, 406, 411, 658, 723, 752, 778, 948
Alw21I	GWGCWC	3 cut(s)	413, 885, 950
Alw26I	GTCTC	2 cut(s)	136, 246
Ama87I	CYCGRG	1 cut(s)	281
Aor13HI	TCCGGA	1 cut(s)	415
AoxI	GGCC	2 cut(s)	46, 348
ApeKI	GCWGC	3 cut(s)	184, 403, 572
Asp700I	GAANNNNTTC	1 cut(s)	636
AspLEI	GCGC	1 cut(s)	237
AspS9I	GGNCC	2 cut(s)	6, 439
AsuHPI	GGTGA	3 cut(s)	365, 757, 914
AvaI	CYCGRG	1 cut(s)	281
AvaII	GGWCC	2 cut(s)	6, 439
BanI	GGYRCC	1 cut(s)	541
BanII	GRGCYC	4 cut(s)	244, 413, 850, 950
Bbv12I	GWGCWC	3 cut(s)	413, 885, 950
BbvI	GCAGC	3 cut(s)	171, 415, 584
BccI	CCATC	3 cut(s)	126, 151, 749
BciT130I	CCWGG	3 cut(s)	199, 347, 708
BcoDI	GTCTC	2 cut(s)	136, 246
BcuI	ACTAGT	1 cut(s)	677
BfaI	CTAG	3 cut(s)	392, 557, 678
BfrI	CTTAAG	1 cut(s)	245
BfuAI	ACCTGC	1 cut(s)	384
BisI	GCNGC	5 cut(s)	153, 185, 404, 573, 831
BlpI	GCTNAGC	1 cut(s)	407
BlsI	GCNGC	5 cut(s)	154, 186, 405, 574, 832
Bme1390I	CCNGG	3 cut(s)	199, 347, 708
Bme18I	GGWCC	2 cut(s)	6, 439
BmeT110I	CYCGRG	1 cut(s)	281
BmgT120I	GGNCC	2 cut(s)	6, 439
BmiI	GGNNCC	2 cut(s)	7, 543
BmrFI	CCNGG	3 cut(s)	199, 347, 708
BmrI	ACTGGG	1 cut(s)	99
BmsI	GCATC	6 cut(s)	207, 437, 477, 880, 906, 1010
BmuI	ACTGGG	1 cut(s)	99
BpmI	CTGGAG	1 cut(s)	992
Bpu10I	CCTNAGC	2 cut(s)	188, 911
Bpu1102I	GCTNAGC	1 cut(s)	407
BpuEI	CTTGAG	5 cut(s)	436, 703, 800, 819, 934
Bsa29I	ATCGAT	2 cut(s)	30, 888
BsaJI	CCNNGG	3 cut(s)	345, 442, 707
BsaWI	WCCGGW	1 cut(s)	415
BsaXI	ACNNNNNCTCC	2 cut(s)	243, 273
Bsc4I	CCNNNNNNNGG	3 cut(s)	55, 430, 528
Bse1I	ACTGG	4 cut(s)	49, 105, 360, 975
Bse3DI	GCAATG	2 cut(s)	619, 922
BseAI	TCCGGA	1 cut(s)	415
BseBI	CCWGG	3 cut(s)	199, 347, 708
BseCI	ATCGAT	2 cut(s)	30, 888
BseDI	CCNNGG	3 cut(s)	345, 442, 707
BseGI	GGATG	1 cut(s)	452
BseLI	CCNNNNNNNGG	3 cut(s)	55, 430, 528
BseMI	GCAATG	2 cut(s)	619, 922
BseMII	CTCAG	4 cut(s)	26, 202, 398, 677
BseNI	ACTGG	4 cut(s)	49, 105, 360, 975
BseRI	GAGGAG	1 cut(s)	116
BseXI	GCAGC	3 cut(s)	171, 415, 584
BsgI	GTGCAG	1 cut(s)	422
BshFI	GGCC	2 cut(s)	48, 350
BshNI	GGYRCC	1 cut(s)	541
BshVI	ATCGAT	2 cut(s)	30, 888
BsiHKAI	GWGCWC	3 cut(s)	413, 885, 950
BsiHKCI	CYCGRG	1 cut(s)	281
BsiSI	CCGG	2 cut(s)	45, 416
BslFI	GGGAC	3 cut(s)	63, 206, 407
BslI	CCNNNNNNNGG	3 cut(s)	55, 430, 528
BsmAI	GTCTC	2 cut(s)	136, 246
BsmBI	CGTCTC	1 cut(s)	136
BsmFI	GGGAC	3 cut(s)	63, 206, 407
BsnI	GGCC	2 cut(s)	48, 350
BsoBI	CYCGRG	1 cut(s)	281
Bsp1286I	GDGCHC	5 cut(s)	244, 413, 850, 885, 950
Bsp13I	TCCGGA	1 cut(s)	415
Bsp143I	GATC	1 cut(s)	566
Bsp1720I	GCTNAGC	1 cut(s)	407
BspACI	CCGC	5 cut(s)	9, 152, 437, 830, 872
BspANI	GGCC	2 cut(s)	48, 350
BspCNI	CTCAG	4 cut(s)	25, 201, 399, 676
BspDI	ATCGAT	2 cut(s)	30, 888
BspEI	TCCGGA	1 cut(s)	415
BspLI	GGNNCC	2 cut(s)	7, 543
BspMI	ACCTGC	1 cut(s)	384
BspT107I	GGYRCC	1 cut(s)	541
BspTI	CTTAAG	1 cut(s)	245
BsrBI	CCGCTC	1 cut(s)	11
BsrDI	GCAATG	2 cut(s)	619, 922
BsrI	ACTGG	4 cut(s)	49, 105, 360, 975
BssECI	CCNNGG	3 cut(s)	345, 442, 707
BssMI	GATC	1 cut(s)	566
BssT1I	CCWWGG	1 cut(s)	442
Bst2UI	CCWGG	3 cut(s)	199, 347, 708
Bst4CI	ACNGT	1 cut(s)	860
BstAFI	CTTAAG	1 cut(s)	245
BstC8I	GCNNGC	3 cut(s)	656, 874, 895
BstDEI	CTNAG	6 cut(s)	12, 188, 293, 407, 663, 911
BstF5I	GGATG	1 cut(s)	452
BstHHI	GCGC	1 cut(s)	237
BstKTI	GATC	1 cut(s)	569
BstMAI	GTCTC	2 cut(s)	136, 246
BstMBI	GATC	1 cut(s)	566
BstMWI	GCNNNNNNNGC	4 cut(s)	158, 217, 356, 376
BstNI	CCWGG	3 cut(s)	199, 347, 708
BstNSI	RCATGY	2 cut(s)	359, 959
BstSCI	CCNGG	3 cut(s)	197, 345, 706
BstV1I	GCAGC	3 cut(s)	171, 415, 584
Bsu15I	ATCGAT	2 cut(s)	30, 888
BsuRI	GGCC	2 cut(s)	48, 350
BsuTUI	ATCGAT	2 cut(s)	30, 888
BtgZI	GCGATG	1 cut(s)	104
BtsCI	GGATG	1 cut(s)	452
BveI	ACCTGC	1 cut(s)	384
Cac8I	GCNNGC	3 cut(s)	656, 874, 895
CfoI	GCGC	1 cut(s)	237
Cfr13I	GGNCC	2 cut(s)	6, 439
ClaI	ATCGAT	2 cut(s)	30, 888
Csp6I	GTAC	1 cut(s)	493
CviAII	CATG	5 cut(s)	298, 356, 367, 602, 956
CviQI	GTAC	1 cut(s)	493
DdeI	CTNAG	6 cut(s)	12, 188, 293, 407, 663, 911
DpnI	GATC	1 cut(s)	568
DpnII	GATC	1 cut(s)	566
EaeI	YGGCCR	1 cut(s)	46
Ecl136II	GAGCTC	2 cut(s)	411, 948
Eco130I	CCWWGG	1 cut(s)	442
Eco24I	GRGCYC	4 cut(s)	244, 413, 850, 950
Eco47I	GGWCC	2 cut(s)	6, 439
Eco53kI	GAGCTC	2 cut(s)	411, 948
Eco57I	CTGAAG	1 cut(s)	197
Eco88I	CYCGRG	1 cut(s)	281
EcoICRI	GAGCTC	2 cut(s)	411, 948
EcoRII	CCWGG	3 cut(s)	197, 345, 706
EcoT14I	CCWWGG	1 cut(s)	442
EcoT38I	GRGCYC	4 cut(s)	244, 413, 850, 950
ErhI	CCWWGG	1 cut(s)	442
Esp3I	CGTCTC	1 cut(s)	136
FaeI	CATG	5 cut(s)	301, 359, 370, 605, 959
FaqI	GGGAC	3 cut(s)	63, 206, 407
FatI	CATG	5 cut(s)	297, 355, 366, 601, 955
FauI	CCCGC	1 cut(s)	865
Fnu4HI	GCNGC	5 cut(s)	153, 185, 404, 573, 831
FokI	GGATG	1 cut(s)	459
FriOI	GRGCYC	4 cut(s)	244, 413, 850, 950
Fsp4HI	GCNGC	5 cut(s)	153, 185, 404, 573, 831
FspBI	CTAG	3 cut(s)	392, 557, 678
GlaI	GCGC	1 cut(s)	236
GluI	GCNGC	5 cut(s)	153, 185, 404, 573, 831
GsuI	CTGGAG	1 cut(s)	992
HaeIII	GGCC	2 cut(s)	48, 350
HapII	CCGG	2 cut(s)	45, 416
HhaI	GCGC	1 cut(s)	237
Hin1II	CATG	5 cut(s)	301, 359, 370, 605, 959
Hin6I	GCGC	1 cut(s)	235
HinP1I	GCGC	1 cut(s)	235
HindIII	AAGCTT	3 cut(s)	656, 721, 776
HpaII	CCGG	2 cut(s)	45, 416
HphI	GGTGA	3 cut(s)	365, 757, 914
Hpy166II	GTNNAC	3 cut(s)	277, 814, 905
Hpy188I	TCNGA	4 cut(s)	15, 177, 216, 231
Hpy188III	TCNNGA	5 cut(s)	283, 416, 641, 930, 951
Hpy8I	GTNNAC	3 cut(s)	277, 814, 905
Hpy99I	CGWCG	1 cut(s)	490
HpyCH4III	ACNGT	1 cut(s)	860
HpyCH4V	TGCA	4 cut(s)	403, 526, 624, 893
HpyF10VI	GCNNNNNNNGC	4 cut(s)	158, 217, 356, 376
HpyF3I	CTNAG	6 cut(s)	12, 188, 293, 407, 663, 911
Hsp92II	CATG	5 cut(s)	301, 359, 370, 605, 959
HspAI	GCGC	1 cut(s)	235
Kpn2I	TCCGGA	1 cut(s)	415
Kzo9I	GATC	1 cut(s)	566
LmnI	GCTCC	3 cut(s)	605, 945, 973
Lsp1109I	GCAGC	3 cut(s)	171, 415, 584
LweI	GCATC	6 cut(s)	207, 437, 477, 880, 906, 1010
MaeI	CTAG	3 cut(s)	392, 557, 678
MalI	GATC	1 cut(s)	568
MbiI	CCGCTC	1 cut(s)	11
MboI	GATC	1 cut(s)	566
MboII	GAAGA	1 cut(s)	298
MhlI	GDGCHC	5 cut(s)	244, 413, 850, 885, 950
MluCI	AATT	2 cut(s)	334, 983
MroI	TCCGGA	1 cut(s)	415
MroXI	GAANNNNTTC	1 cut(s)	636
MseI	TTAA	5 cut(s)	83, 246, 320, 381, 1018
MspA1I	CMGCKG	1 cut(s)	406
MspCI	CTTAAG	1 cut(s)	245
MspI	CCGG	2 cut(s)	45, 416
MspR9I	CCNGG	3 cut(s)	199, 347, 708
MvaI	CCWGG	3 cut(s)	199, 347, 708
MwoI	GCNNNNNNNGC	4 cut(s)	158, 217, 356, 376
NdeII	GATC	1 cut(s)	566
NlaIII	CATG	5 cut(s)	301, 359, 370, 605, 959
NlaIV	GGNNCC	2 cut(s)	7, 543
NspI	RCATGY	2 cut(s)	359, 959
PaeR7I	CTCGAG	1 cut(s)	281
PaqCI	CACCTGC	1 cut(s)	384
PdmI	GAANNNNTTC	1 cut(s)	636
PflMI	CCANNNNNTGG	1 cut(s)	55
PkrI	GCNGC	5 cut(s)	154, 186, 405, 574, 832
Psp124BI	GAGCTC	2 cut(s)	413, 950
Psp6I	CCWGG	3 cut(s)	197, 345, 706
PspGI	CCWGG	3 cut(s)	197, 345, 706
PspN4I	GGNNCC	2 cut(s)	7, 543
PspPI	GGNCC	2 cut(s)	6, 439
PvuII	CAGCTG	1 cut(s)	406
RsaI	GTAC	1 cut(s)	494
RsaNI	GTAC	1 cut(s)	493
SacI	GAGCTC	2 cut(s)	413, 950
SaqAI	TTAA	5 cut(s)	83, 246, 320, 381, 1018
SatI	GCNGC	5 cut(s)	153, 185, 404, 573, 831
Sau3AI	GATC	1 cut(s)	566
Sau96I	GGNCC	2 cut(s)	6, 439
ScrFI	CCNGG	3 cut(s)	199, 347, 708
SduI	GDGCHC	5 cut(s)	244, 413, 850, 885, 950
SfaNI	GCATC	6 cut(s)	207, 437, 477, 880, 906, 1010
Sfr274I	CTCGAG	1 cut(s)	281
SinI	GGWCC	2 cut(s)	6, 439
SlaI	CTCGAG	1 cut(s)	281
SmlI	CTYRAG	7 cut(s)	245, 281, 451, 718, 779, 834, 949
SmoI	CTYRAG	7 cut(s)	245, 281, 451, 718, 779, 834, 949
SpeI	ACTAGT	1 cut(s)	677
Sse9I	AATT	2 cut(s)	334, 983
SsiI	CCGC	5 cut(s)	9, 152, 437, 830, 872
SspMI	CTAG	3 cut(s)	392, 557, 678
SstI	GAGCTC	2 cut(s)	413, 950
StyD4I	CCNGG	3 cut(s)	197, 345, 706
StyI	CCWWGG	1 cut(s)	442
TaaI	ACNGT	1 cut(s)	860
TaqI	TCGA	6 cut(s)	30, 282, 488, 844, 888, 929
TasI	AATT	2 cut(s)	334, 983
TauI	GCSGC	2 cut(s)	155, 833
Tru1I	TTAA	5 cut(s)	83, 246, 320, 381, 1018
Tru9I	TTAA	5 cut(s)	83, 246, 320, 381, 1018
TseI	GCWGC	3 cut(s)	184, 403, 572
TspDTI	ATGAA	4 cut(s)	314, 586, 590, 750
TspGWI	ACGGA	1 cut(s)	77
Van91I	CCANNNNNTGG	1 cut(s)	55
Vha464I	CTTAAG	1 cut(s)	245
VpaK11BI	GGWCC	2 cut(s)	6, 439
XceI	RCATGY	2 cut(s)	359, 959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	967
XhoI	CTCGAG	1 cut(s)	281
XmnI	GAANNNNTTC	1 cut(s)	636
XspI	CTAG	3 cut(s)	392, 557, 678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.