Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

14656681 .. 14658268

Gene Structure 1588 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G229200.1_v2.0.a1.CDS.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 690 bp

ATGGGGCTTCTGGGCAAAGTTCTTAGGAAGTCTTGTGGAGAGTTTTGGGGGAGGAAATGGAACATACAAGATGTATTCACAGTGGCTGTGTTTTTGGCTTTGTATTCCCTTTGTGCATTTGCTCCCTTTCATTTCAATTGGCCTGCATTTTGGGTGGCCATCACTTTGTACGTTGCAACGGGGTTAGGAATCAGGTTGTGTTACCATAGAAGTCTTTTGCACACAGAATTTCAGGCTTCCAAAATGGCTCGAGGCAGTCCGATTGAACGTGTGAGTACGCATCGGTACCACCATCAGTTTACTGACACGGGAAAAGACCCTCACAGCCCCATCAAGGTTTTATGGTATAGTCACATGGGTTGGATCCTTAATAGCCGTCATTGTTTTGAACAGCCCTTCTATAGGTTTCTTGGTCGTACTAAGTTTCTACATCCAATTGCTCTTGGAGGTTTGCTATATGTTGTGGGTGGATTTCCCTTCTTGGTCTGGGGCATGGTGGGTGGCATTGTTTGCGCTTGGAGAAGGTTGGCAAATAACCACCACGCTTTTGAATACTCGGCTCGACATGGGCTAGAATGGTGGCAAATTGATTTTACTTGGTACATAATAAGATTTCTTCAAGCTATTGGAGCGGCAACAAATGTGAAGGTCCCAACTGAAATTCAAAAGCAACGAAAAAGCTTCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000038 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006636 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016053 GO:0016491 GO:0019752 GO:0031984 GO:0032787 GO:0033559 GO:0042175 GO:0042761 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0055114 GO:0071704 GO:0072330 GO:0098827 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FA_desaturase

Protein Analysis

230

Amino Acids

26.66

Weight (kDa)

9.95

Isoelectric Point (pI)

35.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	285
AccB1I	GGYRCC	1 cut(s)	285
AccBSI	CCGCTC	1 cut(s)	632
AciI	CCGC	1 cut(s)	632
AclWI	GGATC	2 cut(s)	358, 371
AcoI	YGGCCR	1 cut(s)	156
AcsI	RAATTY	2 cut(s)	227, 660
AfaI	GTAC	5 cut(s)	170, 277, 287, 418, 602
AfiI	CCNNNNNNNGG	2 cut(s)	334, 402
AflIII	ACRYGT	1 cut(s)	268
AgsI	TTSAA	7 cut(s)	136, 266, 389, 551, 620, 665, 685
AluBI	AGCT	2 cut(s)	623, 681
AluI	AGCT	2 cut(s)	623, 681
AlwI	GGATC	2 cut(s)	358, 371
AlwNI	CAGNNNCTG	1 cut(s)	86
Ama87I	CYCGRG	1 cut(s)	249
AoxI	GGCC	2 cut(s)	140, 156
ApoI	RAATTY	2 cut(s)	227, 660
Asp718I	GGTACC	1 cut(s)	285
AspLEI	GCGC	1 cut(s)	515
AspS9I	GGNCC	1 cut(s)	649
AvaI	CYCGRG	1 cut(s)	249
AvaII	GGWCC	1 cut(s)	649
BalI	TGGCCA	1 cut(s)	158
BamHI	GGATCC	1 cut(s)	363
BanI	GGYRCC	1 cut(s)	285
BccI	CCATC	3 cut(s)	167, 300, 338
BceAI	ACGGC	1 cut(s)	360
BfaI	CTAG	1 cut(s)	572
BfmI	CTRYAG	1 cut(s)	400
BisI	GCNGC	1 cut(s)	633
BlsI	GCNGC	1 cut(s)	634
Bme18I	GGWCC	1 cut(s)	649
BmeT110I	CYCGRG	1 cut(s)	249
BmgT120I	GGNCC	1 cut(s)	649
BmiI	GGNNCC	3 cut(s)	287, 365, 651
BmsI	GCATC	1 cut(s)	289
Bsc4I	CCNNNNNNNGG	2 cut(s)	334, 402
BseGI	GGATG	1 cut(s)	430
BseLI	CCNNNNNNNGG	2 cut(s)	334, 402
BshFI	GGCC	2 cut(s)	142, 158
BshNI	GGYRCC	1 cut(s)	285
BsiHKCI	CYCGRG	1 cut(s)	249
BslFI	GGGAC	1 cut(s)	635
BslI	CCNNNNNNNGG	2 cut(s)	334, 402
BsmFI	GGGAC	1 cut(s)	635
BsnI	GGCC	2 cut(s)	142, 158
BsoBI	CYCGRG	1 cut(s)	249
Bsp143I	GATC	1 cut(s)	363
BspACI	CCGC	1 cut(s)	632
BspANI	GGCC	2 cut(s)	142, 158
BspLI	GGNNCC	3 cut(s)	287, 365, 651
BspPI	GGATC	2 cut(s)	358, 371
BspT107I	GGYRCC	1 cut(s)	285
BsrBI	CCGCTC	1 cut(s)	632
BssMI	GATC	1 cut(s)	363
Bst4CI	ACNGT	1 cut(s)	82
BstAPI	GCANNNNNTGC	1 cut(s)	510
BstC8I	GCNNGC	1 cut(s)	144
BstDEI	CTNAG	2 cut(s)	23, 420
BstENI	CCTNNNNNAGG	1 cut(s)	400
BstF5I	GGATG	1 cut(s)	430
BstHHI	GCGC	1 cut(s)	515
BstKTI	GATC	1 cut(s)	366
BstMBI	GATC	1 cut(s)	363
BstMWI	GCNNNNNNNGC	2 cut(s)	510, 629
BstSFI	CTRYAG	1 cut(s)	400
BstX2I	RGATCY	1 cut(s)	363
BstYI	RGATCY	1 cut(s)	363
BsuRI	GGCC	2 cut(s)	142, 158
BtsCI	GGATG	1 cut(s)	430
BtsIMutI	CAGTG	1 cut(s)	87
Cac8I	GCNNGC	1 cut(s)	144
CaiI	CAGNNNCTG	1 cut(s)	86
CfoI	GCGC	1 cut(s)	515
Cfr13I	GGNCC	1 cut(s)	649
Csp6I	GTAC	5 cut(s)	169, 276, 286, 417, 601
CviAII	CATG	3 cut(s)	355, 493, 566
CviQI	GTAC	5 cut(s)	169, 276, 286, 417, 601
DdeI	CTNAG	2 cut(s)	23, 420
DpnI	GATC	1 cut(s)	365
DpnII	GATC	1 cut(s)	363
EaeI	YGGCCR	1 cut(s)	156
Eco47I	GGWCC	1 cut(s)	649
Eco88I	CYCGRG	1 cut(s)	249
EcoNI	CCTNNNNNAGG	1 cut(s)	400
EcoO109I	RGGNCCY	1 cut(s)	649
FaeI	CATG	3 cut(s)	358, 496, 569
FaqI	GGGAC	1 cut(s)	635
FatI	CATG	3 cut(s)	354, 492, 565
Fnu4HI	GCNGC	1 cut(s)	633
FokI	GGATG	1 cut(s)	417
Fsp4HI	GCNGC	1 cut(s)	633
FspBI	CTAG	1 cut(s)	572
GlaI	GCGC	1 cut(s)	514
GluI	GCNGC	1 cut(s)	633
HaeIII	GGCC	2 cut(s)	142, 158
HhaI	GCGC	1 cut(s)	515
Hin1II	CATG	3 cut(s)	358, 496, 569
Hin6I	GCGC	1 cut(s)	513
HinP1I	GCGC	1 cut(s)	513
HindIII	AAGCTT	1 cut(s)	679
HinfI	GANTC	1 cut(s)	189
Hpy166II	GTNNAC	1 cut(s)	300
Hpy188I	TCNGA	1 cut(s)	261
Hpy8I	GTNNAC	1 cut(s)	300
HpyAV	CCTTC	4 cut(s)	406, 487, 516, 640
HpyCH4III	ACNGT	1 cut(s)	82
HpyCH4IV	ACGT	2 cut(s)	171, 268
HpyCH4V	TGCA	4 cut(s)	116, 146, 176, 220
HpyF10VI	GCNNNNNNNGC	2 cut(s)	510, 629
HpyF3I	CTNAG	2 cut(s)	23, 420
HpySE526I	ACGT	2 cut(s)	171, 268
Hsp92II	CATG	3 cut(s)	358, 496, 569
HspAI	GCGC	1 cut(s)	513
KpnI	GGTACC	1 cut(s)	289
Kzo9I	GATC	1 cut(s)	363
LmnI	GCTCC	2 cut(s)	127, 629
LpnPI	CCDG	4 cut(s)	156, 178, 218, 472
LweI	GCATC	1 cut(s)	289
MaeI	CTAG	1 cut(s)	572
MaeII	ACGT	2 cut(s)	171, 268
MaeIII	GTNAC	2 cut(s)	200, 350
MalI	GATC	1 cut(s)	365
MbiI	CCGCTC	1 cut(s)	632
MboI	GATC	1 cut(s)	363
MboII	GAAGA	1 cut(s)	608
MfeI	CAATTG	2 cut(s)	136, 435
MflI	RGATCY	1 cut(s)	363
MlsI	TGGCCA	1 cut(s)	158
MluCI	AATT	5 cut(s)	136, 227, 435, 585, 660
MluNI	TGGCCA	1 cut(s)	158
MmeI	TCCRAC	1 cut(s)	341
MnlI	CCTC	4 cut(s)	45, 245, 330, 440
Mox20I	TGGCCA	1 cut(s)	158
MscI	TGGCCA	1 cut(s)	158
MseI	TTAA	1 cut(s)	369
Msp20I	TGGCCA	1 cut(s)	158
MunI	CAATTG	2 cut(s)	136, 435
MwoI	GCNNNNNNNGC	2 cut(s)	510, 629
NdeII	GATC	1 cut(s)	363
NlaIII	CATG	3 cut(s)	358, 496, 569
NlaIV	GGNNCC	3 cut(s)	287, 365, 651
NmeAIII	GCCGAG	1 cut(s)	536
NmuCI	GTSAC	1 cut(s)	350
PaeR7I	CTCGAG	1 cut(s)	249
PfeI	GAWTC	1 cut(s)	189
PkrI	GCNGC	1 cut(s)	634
PpuMI	RGGWCCY	1 cut(s)	649
Psp5II	RGGWCCY	1 cut(s)	649
PspN4I	GGNNCC	3 cut(s)	287, 365, 651
PspPI	GGNCC	1 cut(s)	649
PspPPI	RGGWCCY	1 cut(s)	649
PspXI	VCTCGAGB	1 cut(s)	249
PstNI	CAGNNNCTG	1 cut(s)	86
PsuI	RGATCY	1 cut(s)	363
RsaI	GTAC	5 cut(s)	170, 277, 287, 418, 602
RsaNI	GTAC	5 cut(s)	169, 276, 286, 417, 601
SaqAI	TTAA	1 cut(s)	369
SatI	GCNGC	1 cut(s)	633
Sau3AI	GATC	1 cut(s)	363
Sau96I	GGNCC	1 cut(s)	649
SfaNI	GCATC	1 cut(s)	289
SfcI	CTRYAG	1 cut(s)	400
Sfr274I	CTCGAG	1 cut(s)	249
SinI	GGWCC	1 cut(s)	649
SlaI	CTCGAG	1 cut(s)	249
SmlI	CTYRAG	1 cut(s)	249
SmoI	CTYRAG	1 cut(s)	249
Sse9I	AATT	5 cut(s)	136, 227, 435, 585, 660
SsiI	CCGC	1 cut(s)	632
SspMI	CTAG	1 cut(s)	572
TaaI	ACNGT	1 cut(s)	82
TaiI	ACGT	2 cut(s)	174, 271
TaqI	TCGA	2 cut(s)	250, 562
TasI	AATT	5 cut(s)	136, 227, 435, 585, 660
TauI	GCSGC	1 cut(s)	635
TfiI	GAWTC	1 cut(s)	189
Tru1I	TTAA	1 cut(s)	369
Tru9I	TTAA	1 cut(s)	369
TscAI	CASTG	1 cut(s)	87
TseFI	GTSAC	1 cut(s)	350
Tsp45I	GTSAC	1 cut(s)	350
TspDTI	ATGAA	1 cut(s)	119
TspRI	CASTG	1 cut(s)	87
VpaK11BI	GGWCC	1 cut(s)	649
XagI	CCTNNNNNAGG	1 cut(s)	400
XapI	RAATTY	2 cut(s)	227, 660
XhoI	CTCGAG	1 cut(s)	249
XspI	CTAG	1 cut(s)	572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.